Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 4.4e-170 601.3 322 100.0
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 2.9e-161 572.0 325 92.6
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 2.1e-140 502.7 333 83.8
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 1.2e-127 460.3 323 76.8
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 6.7e-126 454.5 322 68.9
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 1.1e-123 447.2 299 80.9
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 2.9e-121 439.1 335 72.8
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 3.2e-120 435.6 323 74.9
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 9.3e-120 434.1 337 72.4
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 7.9e-119 431.0 330 72.4
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 7.9e-119 431.0 322 73.9
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 1.0e-118 430.6 322 72.4
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 1.8e-118 429.9 323 71.5
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 3.0e-118 429.1 322 71.7
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 1.5e-117 426.8 318 75.2
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 4.8e-116 421.8 326 72.7
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 4.1e-115 418.7 329 72.6
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 5.3e-115 418.3 321 68.2
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 5.3e-115 418.3 321 68.2
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 9.0e-115 417.5 365 67.1
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 9.0e-115 417.5 323 63.2
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 1.2e-114 417.2 336 70.2
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 2.0e-114 416.4 325 71.7
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 3.4e-114 415.6 326 72.4
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 3.4e-114 415.6 322 67.7
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.3e-113 413.7 342 69.0
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 5.0e-113 411.8 353 68.3
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 8.5e-113 411.0 320 73.4
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.5e-112 409.5 328 62.8
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 3.2e-112 409.1 350 67.1
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 3.2e-112 409.1 342 67.5
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 1.2e-111 407.1 360 61.4
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 2.7e-111 406.0 323 66.3
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 2.7e-111 406.0 330 69.4
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 3.6e-111 405.6 324 68.2
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 7.9e-111 404.4 351 66.7
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 3.9e-110 402.1 321 66.7
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 3.3e-109 399.1 325 62.8
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 9.7e-109 397.5 349 64.2
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 9.7e-109 397.5 326 68.7
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 2.8e-108 396.0 326 64.7
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 8.2e-108 394.4 324 60.8
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 1.1e-107 394.0 337 65.0
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 9.1e-107 391.0 324 61.1
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 2.0e-106 389.8 385 58.7
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 1.7e-105 386.7 328 64.3
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 8.5e-105 384.4 323 62.2
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 1.9e-104 383.3 326 56.4
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 2.5e-104 382.9 325 56.6
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 4.2e-104 382.1 325 65.8
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 5.5e-104 381.7 349 64.2
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 5.5e-104 381.7 325 64.6
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.6e-103 380.2 310 64.8
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 5.1e-102 375.2 328 67.1
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 1.1e-101 374.0 328 62.8
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 1.5e-101 373.6 334 65.0
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 4.1e-99 365.5 323 61.3
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 9.1e-99 364.4 320 65.3
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 2.9e-97 359.4 324 60.5
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 1.1e-96 357.5 337 61.7
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 1.9e-96 356.7 325 60.9
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.8e-94 350.1 338 58.0
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 1.3e-92 344.0 275 63.6
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 5.3e-91 338.6 346 60.1
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 9.1e-91 337.8 317 63.1
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 4.5e-90 335.5 314 58.3
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 8.5e-89 331.3 341 58.9
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 8.5e-89 331.3 341 58.9
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.1e-88 330.9 305 58.0
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 3.2e-88 329.3 341 58.7
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 9.4e-88 327.8 325 59.7
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 3.6e-87 325.9 310 54.8
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 6.1e-87 325.1 350 56.0
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 6.1e-87 325.1 350 56.0
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 6.1e-87 325.1 350 56.0
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 1.0e-86 324.3 350 56.9
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 1.4e-86 323.9 350 56.0
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 5.2e-86 322.0 360 53.3
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 8.8e-86 321.2 310 51.6
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 1.2e-85 320.9 326 56.4
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.5e-85 320.5 343 53.9
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 1.5e-85 320.5 363 50.7
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 1.5e-85 320.5 349 55.3
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.4e-85 319.3 317 52.7
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 3.4e-85 319.3 336 55.1
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 9.8e-85 317.8 317 52.1
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 1.3e-84 317.4 341 52.8
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 3.7e-84 315.8 381 53.3
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 8.3e-84 314.7 317 52.1
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 3.1e-83 312.8 345 54.5
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 7.0e-83 311.6 349 56.2
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 1.6e-82 310.5 360 50.0
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 2.7e-82 309.7 332 56.9
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 3.8e-81 305.8 384 51.6
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 5.0e-81 305.4 334 52.4
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 5.0e-81 305.4 319 55.2
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 3.2e-80 302.8 314 53.8
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.6e-79 299.3 317 51.1
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 1.8e-78 297.0 334 50.9
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 8.8e-78 294.7 340 55.3
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 6.3e-76 288.5 262 63.0
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 7.0e-75 285.0 317 52.4
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 1.2e-71 274.2 307 48.2
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 4.0e-70 269.2 337 48.4
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 2.2e-68 263.5 317 50.2
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 3.2e-67 259.6 313 45.0
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 4.7e-63 245.7 322 47.2
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 1.3e-60 237.7 203 67.5
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 9.2e-59 231.5 334 44.3
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 1.6e-58 230.7 356 45.5
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 9.5e-56 221.5 313 41.5
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 7.5e-53 211.8 131 75.6
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.3e-52 211.1 324 38.3
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.4e-51 206.8 232 49.6
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 3.2e-51 206.5 129 73.6
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 3.5e-50 203.0 399 35.1
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 4.3e-48 196.1 324 41.7
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 2.0e-45 187.2 153 66.7
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 2.4e-38 163.7 152 51.3
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 8.7e-33 145.2 298 37.2
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.4e-30 137.9 312 30.4
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 1.8e-30 137.5 311 30.5
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 1.4e-27 127.9 326 30.4
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 1.2e-26 124.8 135 45.2
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 3.5e-26 123.2 298 29.5
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 9.6e-24 115.2 111 51.4
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.9e-19 100.9 198 47.0
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 3.0e-17 93.6 168 38.1
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 2.5e-11 73.9 60 56.7
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 4.3e-08 63.2 88 40.9
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 1.8e-06 57.8 123 31.7
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 4.1e-06 56.6 152 28.9
Mapoly0090s0021 Marchantia polymorpha HOM05D021038 ORTHO05D009018 9.0e-06 55.5 119 34.5


User provided reference genes

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