Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 1.1e-62 243.4 154 100.0
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 2.0e-59 232.6 150 86.0
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 2.7e-40 169.1 143 67.1
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 2.3e-39 166.0 152 63.8
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 1.5e-38 163.3 147 61.9
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 1.5e-38 163.3 147 61.9
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 1.9e-38 162.9 151 61.6
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 3.3e-38 162.2 151 62.9
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 5.6e-38 161.4 149 61.7
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 9.5e-38 160.6 149 61.7
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 1.2e-37 160.2 146 63.0
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 2.1e-37 159.5 143 63.6
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 2.1e-37 159.5 148 62.8
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.1e-37 159.5 143 60.8
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 2.1e-37 159.5 143 60.8
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 4.7e-37 158.3 152 60.5
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 6.2e-37 157.9 154 63.0
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 8.1e-37 157.5 148 62.8
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 1.4e-36 156.8 142 61.3
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 1.4e-36 156.8 151 60.9
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 2.3e-36 156.0 152 60.5
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 2.3e-36 156.0 150 62.7
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 3.1e-36 155.6 147 62.6
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 4.0e-36 155.2 143 60.8
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 4.0e-36 155.2 147 61.9
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 4.0e-36 155.2 151 57.6
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 4.0e-36 155.2 151 57.6
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 5.2e-36 154.8 159 57.9
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 5.2e-36 154.8 147 61.2
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 1.2e-35 153.7 149 59.1
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 1.2e-35 153.7 153 58.8
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.5e-35 153.3 151 57.6
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.0e-35 152.9 144 59.7
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.0e-35 152.9 144 59.7
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 2.6e-35 152.5 146 58.2
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 4.4e-35 151.8 146 61.0
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 4.4e-35 151.8 143 60.1
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 5.8e-35 151.4 142 58.5
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 7.6e-35 151.0 149 58.4
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 1.3e-34 150.2 142 57.7
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.3e-34 150.2 145 60.7
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 1.3e-34 150.2 147 60.5
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.7e-34 149.8 145 60.7
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 2.9e-34 149.1 142 57.7
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 2.9e-34 149.1 142 57.0
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 2.9e-34 149.1 146 58.9
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 2.9e-34 149.1 146 58.9
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 4.9e-34 148.3 152 57.2
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 6.4e-34 147.9 146 56.8
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.4e-33 146.7 143 57.3
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 1.9e-33 146.4 144 57.6
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 1.9e-33 146.4 154 60.4
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 2.4e-33 146.0 155 57.4
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 3.2e-33 145.6 149 57.7
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 3.2e-33 145.6 144 59.0
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 4.1e-33 145.2 141 69.5
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 4.1e-33 145.2 153 60.1
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 4.1e-33 145.2 140 60.0
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 7.1e-33 144.4 142 61.3
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 7.1e-33 144.4 142 61.3
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 7.1e-33 144.4 145 58.6
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 7.1e-33 144.4 142 57.0
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 7.1e-33 144.4 143 54.5
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 9.2e-33 144.1 154 57.8
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 9.2e-33 144.1 142 59.2
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 9.2e-33 144.1 142 54.9
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.6e-32 143.3 146 58.9
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 2.1e-32 142.9 140 60.7
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 2.7e-32 142.5 142 54.9
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 2.7e-32 142.5 148 57.4
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 3.5e-32 142.1 141 54.6
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 4.6e-32 141.7 141 60.3
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 4.6e-32 141.7 143 58.0
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 7.8e-32 141.0 142 59.2
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 7.8e-32 141.0 154 55.2
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 1.7e-31 139.8 142 52.8
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 1.7e-31 139.8 147 55.1
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 3.0e-31 139.0 140 55.0
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 8.6e-31 137.5 141 57.4
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 2.5e-30 136.0 146 55.5
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 3.3e-30 135.6 152 62.5
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 5.6e-30 134.8 140 53.6
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 9.6e-30 134.0 141 53.2
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 1.2e-29 133.7 150 52.0
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 2.8e-29 132.5 147 53.7
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 4.7e-29 131.7 130 57.7
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 4.7e-29 131.7 139 54.0
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 6.2e-29 131.3 158 53.8
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 1.1e-28 130.6 136 61.8
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 1.1e-28 130.6 139 53.2
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 1.4e-28 130.2 140 53.6
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 1.4e-28 130.2 140 52.9
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 1.8e-28 129.8 143 51.7
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 3.1e-28 129.0 129 57.4
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 3.1e-28 129.0 142 53.5
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 4.0e-28 128.6 141 65.2
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 8.9e-28 127.5 141 54.6
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 2.0e-27 126.3 146 51.4
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 2.6e-27 125.9 139 51.8
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 2.6e-27 125.9 139 51.8
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 2.6e-27 125.9 139 51.8
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 2.6e-27 125.9 139 51.8
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 2.6e-27 125.9 140 55.0
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 9.9e-27 124.0 138 52.2
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.3e-26 123.6 129 55.0
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 1.3e-26 123.6 139 56.1
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 2.9e-26 122.5 142 50.7
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 4.9e-26 121.7 139 49.6
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 4.2e-25 118.6 148 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 8.7e-23 110.9 141 45.4
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 3.3e-22 109.0 140 56.4
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 1.3e-21 107.1 146 45.9
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 4.8e-21 105.1 125 51.2
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 4.8e-21 105.1 148 44.6
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 1.2e-19 100.5 126 57.1
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 2.0e-19 99.8 140 43.6
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 1.1e-17 94.0 148 42.6
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 4.2e-17 92.0 119 46.2
Sopen11g011060 Solanum pennellii HOM05D011435 ORTHO05D012656 5.4e-17 91.7 134 45.5
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 7.1e-17 91.3 71 66.2
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 1.0e-15 87.4 70 64.3
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 1.3e-15 87.0 115 45.2
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.1e-14 84.0 142 37.3
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 5.6e-14 81.6 139 41.0
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 1.3e-13 80.5 70 58.6
BcaC01g04858 Brassica carinata HOM05D006047 ORTHO05D007353 7.6e-11 71.2 141 35.5
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 3.2e-09 65.9 46 65.2
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 4.6e-08 62.0 68 44.1
Zm00001eb046330 Zea mays HOM05D001486 ORTHO05D036446 3.9e-07 58.9 42 71.4
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 8.7e-07 57.8 67 49.3
Cre01.g031250 Chlamydomonas reinhardtii HOM05D006047 ORTHO05D007353 9.6e-06 54.3 126 31.7


User provided reference genes

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