Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02104 Corylus avellana HOM05D007350 ORTHO05D009323 1.1e-92 343.2 170 100.0
QL11p052353 Quercus lobata HOM05D007350 ORTHO05D009323 9.5e-55 217.2 174 69.0
CiPaw.05G085400 Carya illinoinensis HOM05D007350 ORTHO05D009323 1.4e-50 203.4 174 64.9
Ciclev10029452m.g Citrus clementina HOM05D007350 ORTHO05D009323 8.0e-46 187.6 172 59.9
Prupe.8G169100 Prunus persica HOM05D007350 ORTHO05D009323 7.5e-44 181.0 172 58.1
TWI79G1045 Tripterygium wilfordii HOM05D007350 ORTHO05D009323 2.2e-43 179.5 171 57.3
Gohir.A03G205900 Gossypium hirsutum HOM05D007350 ORTHO05D009323 1.9e-39 166.4 170 56.5
Thecc.02G055300 Theobroma cacao HOM05D007350 ORTHO05D009323 1.9e-39 166.4 169 55.6
Gorai.005G255200 Gossypium raimondii HOM05D007350 ORTHO05D009323 2.5e-39 166.0 170 56.5
Dinv09314 Davidia involucrata HOM05D007350 ORTHO05D009323 3.3e-39 165.6 123 61.8
FvH4_2g15660 Fragaria vesca HOM05D007350 ORTHO05D009323 3.3e-39 165.6 172 56.4
GSVIVG01023973001 Vitis vinifera HOM05D007350 ORTHO05D009323 3.3e-39 165.6 163 56.4
FAN24G2045 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.2e-38 163.7 173 56.6
FAN15G0854 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.6e-38 163.3 172 55.8
RcHm_v2.0_Chr6g0278921 Rosa chinensis HOM05D007350 ORTHO05D009323 2.1e-38 162.9 172 55.8
Gohir.D02G227300 Gossypium hirsutum HOM05D007350 ORTHO05D009323 2.8e-38 162.5 170 55.3
Sabra04G0119700 Salix brachista HOM05D007350 ORTHO05D009323 3.6e-38 162.2 171 54.4
Actinidia18040 Actinidia chinensis HOM05D007350 ORTHO05D009323 3.1e-37 159.1 163 54.6
Potri.004G177800 Populus trichocarpa HOM05D007350 ORTHO05D009323 8.9e-37 157.5 171 53.2
FAN27G1653 Fragaria x ananassa HOM05D007350 ORTHO05D009323 1.5e-36 156.8 181 52.5
Cpa.g.sc20.115 Carica papaya HOM05D007350 ORTHO05D009323 9.8e-36 154.1 173 53.2
Actinidia20526 Actinidia chinensis HOM05D007350 ORTHO05D009323 1.3e-35 153.7 170 51.8
RcHm_v2.0_Chr6g0278901 Rosa chinensis HOM05D007350 ORTHO05D009323 1.7e-35 153.3 173 53.8
Manes.04G071000 Manihot esculenta HOM05D007350 ORTHO05D009323 4.9e-35 151.8 165 52.7
Rhsim03G0180300 Rhododendron simsii HOM05D007350 ORTHO05D009323 1.1e-34 150.6 172 52.3
Hma1.2p1_0032F.1_g019200 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 6.0e-33 144.8 118 66.1
Duzib052G1005 Durio zibethinus HOM05D007350 ORTHO05D009323 1.0e-32 144.1 158 55.1
COL.COLO4_17379 Corchorus olitorius HOM05D007350 ORTHO05D009323 1.3e-32 143.7 171 49.7
MD10G1127900 Malus domestica HOM05D007350 ORTHO05D009323 7.3e-31 137.9 119 64.7
Nn4g24553 Nelumbo nucifera HOM05D007350 ORTHO05D009323 1.2e-30 137.1 165 49.7
Lalb_Chr02g0159761 Lupinus albus HOM05D007350 ORTHO05D009323 2.8e-30 136.0 169 49.1
Lj2g0024385 Lotus japonicus HOM05D007350 ORTHO05D009323 3.6e-30 135.6 171 48.5
Glyma.19G012500 Glycine max HOM05D007350 ORTHO05D009323 6.2e-30 134.8 175 47.4
CSS0005535 Camellia sinensis var. sinensis HOM05D007350 ORTHO05D009323 8.1e-30 134.4 123 53.7
CsaV3_7G001160 Cucumis sativus L. HOM05D007350 ORTHO05D009323 1.1e-29 134.0 149 52.3
Glyma.13G070400 Glycine max HOM05D007350 ORTHO05D009323 1.1e-29 134.0 160 48.1
arahy.Tifrunner.gnm1.ann1.7M0RFB Arachis hypogaea HOM05D007350 ORTHO05D009323 1.8e-29 133.3 131 58.0
ClCG02G003950 Citrullus lanatus HOM05D007350 ORTHO05D009323 1.8e-29 133.3 169 49.7
PSO782G4816 Papaver somniferum HOM05D007350 ORTHO05D009323 4.0e-29 132.1 167 46.1
Phvul.004G019500 Phaseolus vulgaris HOM05D007350 ORTHO05D009323 5.2e-29 131.7 175 49.1
Atru.chr5.3441 Acer truncatum HOM05D007350 ORTHO05D009323 6.8e-29 131.3 154 51.9
Thhalv10026464m.g Eutrema salsugineum HOM05D007350 ORTHO05D009323 6.8e-29 131.3 172 48.3
TPR.G2262 Trifolium pratense HOM05D007350 ORTHO05D009323 6.8e-29 131.3 170 48.8
PSO063G0872 Papaver somniferum HOM05D007350 ORTHO05D009323 1.2e-28 130.6 167 46.1
THA.LOC104807801 Tarenaya hassleriana HOM05D007350 ORTHO05D009323 2.0e-28 129.8 161 49.1
Oeu025102.1 Olea europaea HOM05D007350 ORTHO05D009323 2.6e-28 129.4 175 47.4
VMungo0464G1538 Vigna mungo HOM05D007350 ORTHO05D009323 2.6e-28 129.4 166 47.6
Aqoxy3G04007 Aquilegia oxysepala HOM05D007350 ORTHO05D009323 3.4e-28 129.0 159 50.9
Eucgr.G01372 Eucalyptus grandis HOM05D007350 ORTHO05D009323 7.6e-28 127.9 169 47.9
Medtr6g007793 Medicago truncatula HOM05D007350 ORTHO05D009323 7.6e-28 127.9 168 45.2
Sc08g0002720 Simmondsia chinensis HOM05D007350 ORTHO05D009323 1.7e-27 126.7 169 47.3
MELO3C013337.2 Cucumis melo HOM05D007350 ORTHO05D009323 2.2e-27 126.3 101 67.3
Sp7g37290 Schrenkiella parvula HOM05D007350 ORTHO05D009323 2.9e-27 125.9 169 48.5
Sed0025246 Sechium edule HOM05D007350 ORTHO05D009323 4.9e-27 125.2 171 49.1
CANSAT78G0569 Cannabis sativa HOM05D007350 ORTHO05D009323 8.4e-27 124.4 170 45.3
PGR042G2321 Punica granatum HOM05D007350 ORTHO05D009323 1.1e-26 124.0 169 47.3
MBI19_g01918_MAGBIO Magnolia biondii HOM05D007350 ORTHO05D009323 2.4e-26 122.9 154 51.9
Cc09_g10330 Coffea canephora HOM05D007350 ORTHO05D009323 3.2e-26 122.5 173 43.9
Psat1g060320 Pisum sativum HOM05D007350 ORTHO05D009323 2.1e-25 119.8 173 43.9
Ca_04216_v3 Cicer arietinum L. HOM05D007350 ORTHO05D009323 2.3e-24 116.3 123 53.7
Migut.B01238 Erythranthe guttata HOM05D007350 ORTHO05D009323 2.3e-24 116.3 181 45.3
MSTRG.20506 Avicennia marina HOM05D007350 ORTHO05D009323 3.9e-24 115.5 175 46.9
AL7G10350 Arabidopsis lyrata HOM05D007350 ORTHO05D009323 5.1e-24 115.2 170 45.3
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 1.9e-23 113.2 111 54.1
AT4G38490 Arabidopsis thaliana HOM05D007350 ORTHO05D009323 4.3e-23 112.1 173 45.1
HanXRQChr10g0298081 Helianthus annuus HOM05D007350 ORTHO05D009323 5.6e-23 111.7 150 45.3
Carub.0007s0037 Capsella rubella HOM05D007350 ORTHO05D009323 9.6e-23 110.9 169 46.7
TAR374G1157 Trochodendron aralioides HOM05D007350 ORTHO05D009323 1.2e-22 110.5 95 62.1
SGA_v2.0_scaffold124G33608 Striga asiatica HOM05D007350 ORTHO05D009323 2.8e-22 109.4 180 45.6
Atru.chr6.83 Acer truncatum HOM05D007350 ORTHO05D009323 8.1e-22 107.8 109 56.9
Nitab4.5_0005221g0020 Nicotiana tabacum HOM05D007350 ORTHO05D009323 2.4e-21 106.3 158 42.4
CAN.G112.14 Capsicum annuum HOM05D007350 ORTHO05D009323 3.1e-21 105.9 166 43.4
Sopen05g029130 Solanum pennellii HOM05D007350 ORTHO05D009323 5.2e-21 105.1 164 42.7
CARHR294210 Cardamine hirsuta HOM05D007350 ORTHO05D009323 1.2e-20 104.0 172 41.9
ATR0598G093 Amborella trichopoda HOM05D007350 ORTHO05D009323 2.0e-20 103.2 102 57.8
Solyc05g050720.4 Solanum lycopersicum HOM05D007350 ORTHO05D009323 2.0e-20 103.2 164 42.1
BcaC01g00233 Brassica carinata HOM05D007350 ORTHO05D009323 3.4e-20 102.4 162 43.8
AUR62013001 Chenopodium quinoa HOM05D007350 ORTHO05D009323 3.4e-20 102.4 121 48.8
RcHm_v2.0_Chr6g0278961 Rosa chinensis HOM05D007350 ORTHO05D009323 4.4e-20 102.1 122 45.1
Hund16245 Selenicereus undatus HOM05D007350 ORTHO05D009323 5.8e-20 101.7 94 60.6
Lsat_1_v5_gn_4_72021 Lactuca sativa HOM05D007350 ORTHO05D009323 9.9e-20 100.9 112 56.2
A08p24200 Brassica napus HOM05D007350 ORTHO05D009323 2.2e-19 99.8 94 59.6
Nitab4.5_0002598g0070 Nicotiana tabacum HOM05D007350 ORTHO05D009323 3.8e-19 99.0 158 42.4
ECA234G1892 Erigeron canadensis HOM05D007350 ORTHO05D009323 1.1e-18 97.4 161 43.5
BolC3t19964H Brassica oleracea HOM05D007350 ORTHO05D009323 2.4e-18 96.3 94 57.4
BcaC01g00225 Brassica carinata HOM05D007350 ORTHO05D009323 4.2e-18 95.5 162 43.2
CDE05G3477 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 4.2e-18 95.5 142 41.5
AUR62010011 Chenopodium quinoa HOM05D007350 ORTHO05D009323 5.4e-18 95.1 94 55.3
C03p77120 Brassica napus HOM05D007350 ORTHO05D009323 7.1e-18 94.7 94 56.4
Hma1.2p1_0032F.1_g019210 Hydrangea macrophylla HOM05D007350 ORTHO05D009323 7.1e-18 94.7 73 75.3
unitig_749.g14334 Utricularia gibba HOM05D000730 ORTHO05D000578 7.1e-18 94.7 107 53.3
BraA08t34374Z Brassica rapa HOM05D007350 ORTHO05D009323 9.3e-18 94.4 94 57.4
Os09g0450200 Oryza sativa ssp. japonica HOM05D007350 ORTHO05D009323 3.5e-17 92.4 81 54.3
PGSC0003DMG400006999 Solanum tuberosum HOM05D007350 ORTHO05D009323 4.8e-14 82.0 112 39.3
SalBow5G3345 Salvia bowleyana HOM05D007350 ORTHO05D009323 1.4e-13 80.5 139 37.4
CDE11G0403 Ceratophyllum demersum HOM05D007350 ORTHO05D009323 3.1e-13 79.3 73 60.3
DCAR_004401 Daucus carota HOM05D000250 ORTHO05D000625 5.3e-13 78.6 74 51.4
MD10G1128000 Malus domestica HOM05D007350 ORTHO05D009323 1.3e-11 73.9 79 58.2
HPP92_012658 Vanilla planifolia HOM05D007350 ORTHO05D009323 3.2e-10 69.3 95 44.2
Pp3c6_16710 Physcomitrium patens HOM05D007350 ORTHO05D009323 2.5e-07 59.7 89 42.7
Mapoly0060s0112 Marchantia polymorpha HOM05D007350 ORTHO05D009323 4.8e-06 55.5 87 40.2


User provided reference genes

Program Settings