Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_02100 Corylus avellana HOM05D004086 ORTHO05D004641 3.6e-131 471.9 283 100.0
CiPaw.02G015600 Carya illinoinensis HOM05D004086 ORTHO05D004641 2.7e-70 269.6 250 61.2
QL06p045466 Quercus lobata HOM05D004086 ORTHO05D004641 1.9e-68 263.5 277 64.6
Haze_15116 Corylus avellana HOM05D004086 ORTHO05D004641 4.7e-67 258.8 231 67.5
CANSAT01G2856 Cannabis sativa HOM05D004086 ORTHO05D004641 1.3e-64 250.8 261 54.0
MD02G1151400 Malus domestica HOM05D004086 ORTHO05D004641 2.1e-62 243.4 249 58.2
Hma1.2p1_0400F.1_g144650 Hydrangea macrophylla HOM05D004086 ORTHO05D004641 1.6e-59 233.8 251 61.4
RcHm_v2.0_Chr2g0102021 Rosa chinensis HOM05D004086 ORTHO05D004641 4.0e-58 229.2 272 49.6
GSVIVG01018995001 Vitis vinifera HOM05D004086 ORTHO05D004641 2.0e-57 226.9 268 50.0
FAN19G3131 Fragaria x ananassa HOM05D004086 ORTHO05D004641 4.4e-57 225.7 260 49.6
Thecc.01G039100 Theobroma cacao HOM05D004086 ORTHO05D004641 2.9e-56 223.0 197 61.4
vmacro07910 Vaccinium macrocarpon HOM05D004086 ORTHO05D004641 2.9e-56 223.0 244 51.2
ClCG07G009030 Citrullus lanatus HOM05D004086 ORTHO05D004641 1.1e-55 221.1 262 52.7
FAN26G0470 Fragaria x ananassa HOM05D004086 ORTHO05D004641 3.2e-55 219.5 249 54.6
Gohir.D11G227900 Gossypium hirsutum HOM05D004086 ORTHO05D004641 2.1e-54 216.9 198 56.6
Gorai.007G205200 Gossypium raimondii HOM05D004086 ORTHO05D004641 2.1e-54 216.9 198 56.6
Gohir.D11G192200 Gossypium hirsutum HOM05D004086 ORTHO05D004641 2.7e-54 216.5 198 56.6
MELO3C017544.2 Cucumis melo HOM05D004086 ORTHO05D004641 3.5e-54 216.1 277 47.3
Duzib264G0994 Durio zibethinus HOM05D004086 ORTHO05D004641 3.5e-54 216.1 199 57.8
FvH4_1g13700 Fragaria vesca HOM05D004086 ORTHO05D004641 3.5e-54 216.1 259 47.9
Prupe.7G151600 Prunus persica HOM05D004086 ORTHO05D004641 3.5e-54 216.1 256 55.1
DCAR_025930 Daucus carota HOM05D004086 ORTHO05D004641 4.6e-54 215.7 242 48.8
Ciclev10025048m.g Citrus clementina HOM05D004086 ORTHO05D004641 7.8e-54 214.9 281 46.6
CsaV3_4G005180 Cucumis sativus L. HOM05D004086 ORTHO05D004641 1.0e-53 214.5 277 54.2
Rhsim03G0093700 Rhododendron simsii HOM05D004086 ORTHO05D004641 3.9e-53 212.6 266 47.4
Gohir.D11G227980 Gossypium hirsutum HOM05D004086 ORTHO05D004641 6.6e-53 211.8 198 55.6
FAN23G2825 Fragaria x ananassa HOM05D004086 ORTHO05D004641 1.1e-52 211.1 199 56.3
FAN28G1508 Fragaria x ananassa HOM05D004086 ORTHO05D004641 1.1e-52 211.1 279 45.2
Gohir.A11G185700 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.1e-52 211.1 198 55.1
Actinidia36545 Actinidia chinensis HOM05D004086 ORTHO05D004641 1.5e-52 210.7 243 48.6
Potri.007G028600 Populus trichocarpa HOM05D004086 ORTHO05D004641 3.3e-52 209.5 240 56.7
Sed0023254 Sechium edule HOM05D004086 ORTHO05D004641 4.3e-52 209.1 272 46.3
Sabra07G0024800 Salix brachista HOM05D004086 ORTHO05D004641 1.2e-51 207.6 240 55.0
CSS0022456 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 3.6e-51 206.1 251 48.6
CSS0048181 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 3.6e-51 206.1 251 48.6
Medtr5g019810 Medicago truncatula HOM05D004086 ORTHO05D004641 1.4e-50 204.1 249 46.2
TWI09G1017 Tripterygium wilfordii HOM05D004086 ORTHO05D004641 2.4e-50 203.4 260 47.3
COL.COLO4_22111 Corchorus olitorius HOM05D004086 ORTHO05D004641 6.9e-50 201.8 161 60.2
TAR628G1622 Trochodendron aralioides HOM05D004086 ORTHO05D004641 3.4e-49 199.5 170 61.2
Psat2g160960 Pisum sativum HOM05D004086 ORTHO05D004641 1.7e-48 197.2 271 43.5
CARHR287960 Cardamine hirsuta HOM05D004086 ORTHO05D004641 2.2e-48 196.8 209 51.2
Lalb_Chr20g0123501 Lupinus albus HOM05D004086 ORTHO05D004641 4.9e-48 195.7 279 41.9
A06p38290 Brassica napus HOM05D004086 ORTHO05D004641 1.4e-47 194.1 183 56.3
BraA06t26744Z Brassica rapa HOM05D004086 ORTHO05D004641 1.4e-47 194.1 183 56.3
Lj5A533G14 Lonicera japonica HOM05D004086 ORTHO05D004641 1.9e-47 193.7 166 57.8
MD15G1266000 Malus domestica HOM05D004086 ORTHO05D004641 3.2e-47 193.0 153 62.1
BolC7t44527H Brassica oleracea HOM05D004086 ORTHO05D004641 9.3e-47 191.4 204 52.0
Manes.07G068600 Manihot esculenta HOM05D004086 ORTHO05D004641 1.2e-46 191.0 273 43.6
THA.LOC104819797 Tarenaya hassleriana HOM05D004086 ORTHO05D004641 1.6e-46 190.7 270 42.2
MSTRG.23544 Avicennia marina HOM05D004086 ORTHO05D004641 3.5e-46 189.5 182 53.3
Medtr5g026040 Medicago truncatula HOM05D004086 ORTHO05D004641 3.5e-46 189.5 258 46.5
arahy.Tifrunner.gnm1.ann1.FS5W7P Arachis hypogaea HOM05D004086 ORTHO05D004641 2.3e-45 186.8 284 44.7
C07p39950 Brassica napus HOM05D004086 ORTHO05D004641 2.3e-45 186.8 163 58.9
Lj5g0019705 Lotus japonicus HOM05D004086 ORTHO05D004641 2.3e-45 186.8 169 52.7
AL253U10010 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 3.0e-45 186.4 192 54.7
arahy.Tifrunner.gnm1.ann1.4T6GLU Arachis hypogaea HOM05D004086 ORTHO05D004641 3.0e-45 186.4 284 43.3
Eucgr.H01260 Eucalyptus grandis HOM05D004086 ORTHO05D004641 5.1e-45 185.7 176 56.8
AT5G49530 Arabidopsis thaliana HOM05D004086 ORTHO05D004641 8.7e-45 184.9 212 48.1
Carub.0008s0941 Capsella rubella HOM05D004086 ORTHO05D004641 1.5e-44 184.1 193 52.8
Sp2g19840 Schrenkiella parvula HOM05D004086 ORTHO05D004641 1.5e-44 184.1 214 47.2
SpUn0021_0010 Schrenkiella parvula HOM05D004086 ORTHO05D004641 1.5e-44 184.1 214 47.2
Atru.chr3.545 Acer truncatum HOM05D004086 ORTHO05D004641 2.5e-44 183.3 191 52.4
Glyma.11G009900 Glycine max HOM05D004086 ORTHO05D004641 2.5e-44 183.3 266 49.6
Cpa.g.sc353.1 Carica papaya HOM05D004086 ORTHO05D004641 5.6e-44 182.2 230 49.6
VMungo1215G0116 Vigna mungo HOM05D004086 ORTHO05D004641 5.6e-44 182.2 276 43.8
DCAR_023357 Daucus carota HOM05D004086 ORTHO05D004641 1.6e-43 180.6 254 48.8
TPR.G18816 Trifolium pratense HOM05D004086 ORTHO05D004641 1.6e-43 180.6 153 55.6
Thhalv10003751m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 2.8e-43 179.9 133 64.7
Ca_00390_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 3.6e-43 179.5 275 41.1
Thhalv10023969m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 6.2e-43 178.7 224 46.0
Lsat_1_v5_gn_4_150860 Lactuca sativa HOM05D004086 ORTHO05D004641 6.2e-43 178.7 182 52.2
TPR.G28496 Trifolium pratense HOM05D004086 ORTHO05D004641 3.1e-42 176.4 196 48.5
Oeu053005.1 Olea europaea HOM05D004086 ORTHO05D004641 2.0e-41 173.7 182 52.2
Aqoxy6G01048 Aquilegia oxysepala HOM05D004086 ORTHO05D004641 3.4e-41 172.9 150 59.3
Cc07_g09240 Coffea canephora HOM05D004086 ORTHO05D004641 3.4e-41 172.9 262 41.2
PSO675G7346 Papaver somniferum HOM05D004086 ORTHO05D004641 9.9e-41 171.4 150 61.3
Nitab4.5_0010593g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 1.3e-40 171.0 238 47.9
Aa31LG11G8330 Aethionema arabicum HOM05D004086 ORTHO05D004641 2.2e-40 170.2 211 46.0
ECA232G4057 Erigeron canadensis HOM05D004086 ORTHO05D001499 2.9e-40 169.9 182 50.0
CDE10G0302 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 4.9e-40 169.1 166 52.4
Ah.15g091580 Amaranthus hybridus HOM05D004086 ORTHO05D004641 8.4e-40 168.3 186 47.8
Nitab4.5_0008457g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 8.4e-40 168.3 258 42.6
Sopen08g027080 Solanum pennellii HOM05D004086 ORTHO05D004641 3.2e-39 166.4 259 43.2
PGSC0003DMG400004762 Solanum tuberosum HOM05D004086 ORTHO05D004641 7.1e-39 165.2 250 45.2
Phvul.002G040400 Phaseolus vulgaris HOM05D004086 ORTHO05D004641 1.2e-38 164.5 163 50.3
Hund05506 Selenicereus undatus HOM05D004086 ORTHO05D004641 1.2e-38 164.5 171 52.0
Solyc08g078600.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 2.7e-38 163.3 259 42.1
Peaxi162Scf00515g00225 Petunia axillaris HOM05D004086 ORTHO05D004641 3.5e-38 162.9 168 53.6
Actinidia12113 Actinidia chinensis HOM05D004086 ORTHO05D004641 4.6e-38 162.5 251 42.2
Migut.H00181 Erythranthe guttata HOM05D004086 ORTHO05D004641 4.6e-38 162.5 270 39.3
Mapoly0113s0019 Marchantia polymorpha HOM05D004086 ORTHO05D004641 6.0e-38 162.2 147 56.5
FvH4_2g10200 Fragaria vesca HOM05D004086 ORTHO05D004641 3.9e-37 159.5 267 40.4
CAN.G1058.29 Capsicum annuum HOM05D004086 ORTHO05D004641 6.7e-37 158.7 246 41.5
Dinv39963 Davidia involucrata HOM05D004086 ORTHO05D004641 6.7e-37 158.7 272 42.3
CAN.G358.119 Capsicum annuum HOM05D004086 ORTHO05D004641 8.7e-37 158.3 256 39.5
AagrBONN_evm.TU.Sc2ySwM_344.3508 Anthoceros agrestis HOM05D004086 ORTHO05D004641 2.5e-36 156.8 167 48.5
ECA238G3830 Erigeron canadensis HOM05D004086 ORTHO05D004641 2.5e-36 156.8 154 51.3
Haze_02099 Corylus avellana HOM05D004086 ORTHO05D004641 9.6e-36 154.8 157 63.7
Zm00001eb269010 Zea mays HOM05D004086 ORTHO05D004641 1.3e-35 154.5 126 61.9
Pp3c2_15450 Physcomitrium patens HOM05D004086 ORTHO05D004641 1.6e-35 154.1 156 53.2
Ah.15g091670 Amaranthus hybridus HOM05D004086 ORTHO05D004641 2.1e-35 153.7 150 53.3
AL8G23320 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 3.7e-35 152.9 192 49.0
SMO203G0104 Selaginella moellendorffii HOM05D004086 ORTHO05D004641 1.1e-34 151.4 164 48.8
HanXRQChr09g0262111 Helianthus annuus HOM05D004086 ORTHO05D004641 3.4e-33 146.4 123 56.1
COL.COLO4_14865 Corchorus olitorius HOM05D004086 ORTHO05D004641 9.9e-33 144.8 196 46.4
CDE05G1436 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 4.9e-32 142.5 146 52.1
CBR_g50911 Chara braunii HOM05D004086 ORTHO05D004641 4.9e-32 142.5 138 52.2
CBR_g50913 Chara braunii HOM05D004086 ORTHO05D004641 4.9e-32 142.5 138 52.2
Sopen02g030230 Solanum pennellii HOM05D004086 ORTHO05D004641 4.9e-32 142.5 245 38.4
Solyc02g085560.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 8.4e-32 141.7 245 38.0
EL10Ac7g17738 Beta vulgaris HOM05D004086 ORTHO05D004641 1.4e-31 141.0 252 44.8
ATR0064G058 Amborella trichopoda HOM05D004086 ORTHO05D004641 1.9e-31 140.6 181 44.2
CBR_g22032 Chara braunii HOM05D004086 ORTHO05D004641 5.5e-31 139.0 155 47.7
HPP92_015988 Vanilla planifolia HOM05D004086 ORTHO05D004641 9.3e-31 138.3 126 54.8
BcaC03g17736 Brassica carinata HOM05D004086 ORTHO05D004641 1.2e-30 137.9 173 48.0
AL5G27650 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 1.0e-29 134.8 174 45.4
FAN24G1278 Fragaria x ananassa HOM05D004086 ORTHO05D004641 1.8e-29 134.0 156 47.4
A02p38220 Brassica napus HOM05D004086 ORTHO05D004641 1.1e-28 131.3 152 48.0
PSO541G3560 Papaver somniferum HOM05D004086 ORTHO05D004641 7.4e-28 128.6 150 52.0
unitig_52.g17585 Utricularia gibba HOM05D004086 ORTHO05D004641 2.8e-27 126.7 149 43.6
PSO017G0414 Papaver somniferum HOM05D004086 ORTHO05D004641 1.8e-26 124.0 113 58.4
AUR62008836 Chenopodium quinoa HOM05D004086 ORTHO05D004641 9.0e-26 121.7 183 48.1
Lsat_1_v5_gn_4_150881 Lactuca sativa HOM05D004086 ORTHO05D004641 2.0e-25 120.6 182 37.9
AUR62025406 Chenopodium quinoa HOM05D004086 ORTHO05D004641 1.4e-23 114.4 168 45.8
CDE10G1264 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 7.1e-23 112.1 146 43.8
SEGI_29880 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 7.9e-22 108.6 80 63.8
Nn5g29538 Nelumbo nucifera HOM05D004086 ORTHO05D004641 3.0e-21 106.7 99 57.6
Ah.15g091620 Amaranthus hybridus HOM05D004086 ORTHO05D004641 8.7e-21 105.1 104 52.9
C02p57460 Brassica napus HOM05D004086 ORTHO05D004641 4.3e-20 102.8 173 40.5
HPP92_026151 Vanilla planifolia HOM05D004086 ORTHO05D004641 7.4e-20 102.1 118 45.8
SEGI_36884 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 9.7e-20 101.7 82 57.3
BolC2t11821H Brassica oleracea HOM05D004086 ORTHO05D004641 1.1e-18 98.2 87 54.0
SHI06749 Sapria himalayana HOM05D004086 ORTHO05D004641 2.6e-17 93.6 118 44.9
Nitab4.5_0004445g0020 Nicotiana tabacum HOM05D004086 ORTHO05D004641 5.9e-17 92.4 88 53.4
Cre10.g454650 Chlamydomonas reinhardtii HOM05D004086 ORTHO05D004641 2.2e-16 90.5 135 39.3
Gohir.A11G236200 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.1e-15 88.2 86 55.8
MELO3C034917.2 Cucumis melo HOM05D004086 ORTHO05D004641 2.5e-12 77.0 71 46.5
Haze_15127 Corylus avellana HOM05D004086 ORTHO05D004641 3.3e-12 76.6 74 62.2
Oeu014919.1 Olea europaea HOM05D004086 ORTHO05D004641 7.4e-12 75.5 186 33.9
Glyma.01G232951 Glycine max HOM05D001514 ORTHO05D002956 1.2e-09 68.2 133 35.3
CARHR050700 Cardamine hirsuta HOM05D004086 ORTHO05D004641 1.7e-08 64.3 63 49.2
BcaB07g34160 Brassica carinata HOM05D004086 ORTHO05D004641 1.2e-06 58.2 73 50.7
QL06p009809 Quercus lobata HOM05D004086 ORTHO05D004641 1.6e-06 57.8 58 51.7


User provided reference genes

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