Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 8.2e-76 287.0 144 100.0
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 1.4e-70 269.6 144 94.4
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 4.7e-47 191.4 125 79.2
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 2.9e-44 182.2 128 75.0
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 3.7e-44 181.8 143 67.1
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 4.6e-42 174.9 146 65.8
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 6.0e-42 174.5 143 64.3
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 7.8e-42 174.1 143 67.1
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 2.3e-41 172.6 143 64.3
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 3.0e-41 172.2 146 64.4
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 5.0e-41 171.4 109 78.9
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 5.0e-41 171.4 111 76.6
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 1.1e-40 170.2 146 65.1
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 3.3e-40 168.7 124 71.0
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 4.3e-40 168.3 109 79.8
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 4.3e-40 168.3 109 77.1
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 4.3e-40 168.3 109 77.1
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 4.3e-40 168.3 108 76.9
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 7.3e-40 167.5 146 64.4
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 1.6e-39 166.4 112 75.9
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 2.1e-39 166.0 103 79.6
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 4.7e-39 164.9 149 62.4
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 4.7e-39 164.9 148 64.9
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 6.2e-39 164.5 131 61.1
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 2.3e-38 162.5 127 66.1
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 3.1e-38 162.2 111 72.1
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 3.1e-38 162.2 105 76.2
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 3.1e-38 162.2 111 73.0
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 4.0e-38 161.8 109 74.3
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 4.0e-38 161.8 113 72.6
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 8.9e-38 160.6 102 76.5
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 8.9e-38 160.6 94 84.0
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 1.2e-37 160.2 102 77.5
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 2.0e-37 159.5 109 73.4
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 2.6e-37 159.1 94 81.9
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 2.6e-37 159.1 94 81.9
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 3.4e-37 158.7 99 75.8
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 4.4e-37 158.3 106 70.8
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 4.4e-37 158.3 94 81.9
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 4.4e-37 158.3 106 73.6
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 5.8e-37 157.9 107 74.8
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 1.3e-36 156.8 115 71.3
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 1.7e-36 156.4 143 60.8
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 1.7e-36 156.4 103 73.8
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 1.7e-36 156.4 109 73.4
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 1.7e-36 156.4 104 75.0
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 2.2e-36 156.0 93 81.7
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 3.7e-36 155.2 100 75.0
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 4.9e-36 154.8 119 68.1
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 6.4e-36 154.5 157 58.6
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 8.3e-36 154.1 101 74.3
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 8.3e-36 154.1 115 69.6
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.1e-35 153.7 101 75.2
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.4e-35 153.3 107 71.0
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 1.4e-35 153.3 132 61.4
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 1.9e-35 152.9 129 63.6
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 2.4e-35 152.5 104 75.0
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 3.2e-35 152.1 132 60.6
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 5.4e-35 151.4 101 74.3
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 1.2e-34 150.2 130 60.8
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 1.6e-34 149.8 136 58.8
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 3.5e-34 148.7 109 71.6
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 4.6e-34 148.3 107 71.0
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 4.6e-34 148.3 100 71.0
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 4.6e-34 148.3 134 57.5
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 6.0e-34 147.9 132 61.4
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 7.8e-34 147.5 107 67.3
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 1.0e-33 147.1 94 75.5
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 1.0e-33 147.1 109 69.7
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 1.7e-33 146.4 132 59.8
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 1.7e-33 146.4 109 67.9
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 2.3e-33 146.0 129 59.7
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 3.0e-33 145.6 107 65.4
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 8.6e-33 144.1 101 73.3
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 8.6e-33 144.1 101 71.3
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.9e-32 142.9 129 59.7
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.9e-32 142.9 109 66.1
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.9e-32 142.9 109 66.1
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 1.9e-32 142.9 126 57.9
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 2.5e-32 142.5 99 72.7
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 4.3e-32 141.7 135 55.6
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 5.6e-32 141.4 141 53.2
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 7.3e-32 141.0 129 58.9
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 7.3e-32 141.0 107 64.5
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 7.3e-32 141.0 94 75.5
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 2.8e-31 139.0 93 68.8
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 2.8e-31 139.0 118 61.0
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 3.6e-31 138.7 94 68.1
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 6.2e-31 137.9 93 68.8
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 6.2e-31 137.9 93 68.8
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 8.1e-31 137.5 95 73.7
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 8.1e-31 137.5 95 69.5
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 1.1e-30 137.1 107 60.7
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 1.4e-30 136.7 149 50.3
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 1.8e-30 136.3 104 70.2
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 6.8e-30 134.4 92 68.5
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 6.8e-30 134.4 151 52.3
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 2.0e-29 132.9 107 63.6
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 1.7e-28 129.8 180 43.3
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 2.2e-28 129.4 168 45.8
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 2.2e-28 129.4 95 65.3
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 3.8e-28 128.6 109 55.0
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 1.4e-27 126.7 98 64.3
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 2.1e-26 122.9 89 70.8
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 6.6e-25 117.9 209 38.8
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 1.9e-24 116.3 102 61.8
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 1.6e-23 113.2 76 72.4
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 1.1e-22 110.5 101 59.4
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 9.0e-22 107.5 112 50.0
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 3.4e-21 105.5 61 80.3
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 1.4e-19 100.1 134 41.8
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 1.6e-18 96.7 55 87.3
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 2.7e-18 95.9 103 42.7
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 3.9e-17 92.0 106 55.7
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 8.7e-17 90.9 96 44.8
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.5e-16 90.1 58 75.9
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 4.3e-16 88.6 97 55.7
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 9.6e-16 87.4 94 46.8
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.9e-11 73.2 42 76.2
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 3.2e-11 72.4 98 40.8
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 1.3e-07 60.5 96 34.4


User provided reference genes

Program Settings