Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 3.0e-145 518.5 255 100.0
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 2.7e-114 415.6 256 84.0
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 4.8e-87 325.1 256 69.5
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 1.2e-82 310.5 255 65.5
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 1.3e-68 263.8 257 55.6
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 9.5e-67 257.7 255 55.7
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 1.2e-66 257.3 257 54.5
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 9.8e-64 247.7 250 52.4
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 3.2e-62 242.7 256 53.1
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 3.2e-62 242.7 253 54.2
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 3.5e-61 239.2 258 54.3
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 4.6e-61 238.8 253 51.0
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 2.1e-58 229.9 255 51.4
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 3.1e-57 226.1 257 51.8
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 9.8e-56 221.1 252 50.0
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 1.1e-54 217.6 242 49.6
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 1.4e-54 217.2 255 49.0
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 7.1e-54 214.9 253 47.8
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 2.7e-53 213.0 253 47.8
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 6.0e-53 211.8 258 48.8
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 6.0e-53 211.8 258 48.4
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 6.0e-53 211.8 254 48.8
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 1.0e-52 211.1 248 52.0
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 3.0e-52 209.5 244 50.8
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 1.6e-50 203.8 253 45.1
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 1.4e-49 200.7 259 45.9
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 4.0e-49 199.1 253 46.2
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 7.6e-48 194.9 277 45.5
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 9.9e-48 194.5 277 45.1
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 3.7e-47 192.6 253 43.9
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 1.4e-46 190.7 267 43.4
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 1.9e-46 190.3 255 46.7
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.9e-46 190.3 280 43.9
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 4.6e-45 185.7 260 45.8
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 6.0e-45 185.3 253 42.7
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.3e-44 183.3 238 44.5
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 5.1e-44 182.2 296 41.6
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 7.3e-43 178.3 255 45.9
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 7.3e-43 178.3 255 45.9
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 4.0e-41 172.6 233 46.4
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 6.8e-41 171.8 275 40.0
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 6.8e-41 171.8 254 44.1
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 4.4e-40 169.1 261 41.8
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 1.1e-38 164.5 256 44.9
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 2.7e-37 159.8 251 40.6
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 2.3e-36 156.8 172 51.2
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 2.4e-33 146.7 152 53.3
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 4.0e-33 146.0 190 46.3
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 5.3e-33 145.6 267 37.5
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 1.4e-30 137.5 170 47.1
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 5.4e-30 135.6 95 70.5
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 1.0e-28 131.3 176 44.3
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 1.5e-27 127.5 278 34.2
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 5.8e-24 115.5 150 47.3
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 7.6e-24 115.2 245 35.5
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 2.9e-23 113.2 170 46.5
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 2.9e-23 113.2 170 46.5
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 3.8e-23 112.8 170 46.5
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 4.6e-21 105.9 233 33.5
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 6.7e-20 102.1 167 43.1
QL05p004958 Quercus lobata HOM05D008254 ORTHO05D010423 1.1e-19 101.3 90 63.3
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 2.4e-17 93.6 70 68.6
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 1.0e-12 78.2 101 42.6
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 2.8e-10 70.1 62 56.5


User provided reference genes

Program Settings