Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 8.4e-255 883.2 466 100.0
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 1.0e-244 849.7 473 95.6
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 1.2e-208 729.9 506 77.7
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 8.5e-207 723.8 474 82.3
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 2.7e-184 649.0 475 71.8
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 3.0e-183 645.6 473 72.9
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 9.5e-182 640.6 465 73.1
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 1.1e-180 637.1 471 72.0
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 1.1e-180 637.1 471 70.7
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 1.4e-180 636.7 475 71.6
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 3.1e-180 635.6 481 70.5
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 3.4e-179 632.1 473 71.0
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 7.5e-179 630.9 473 71.2
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 2.9e-178 629.0 468 71.8
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 1.4e-177 626.7 473 70.2
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 1.9e-177 626.3 471 70.1
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 5.4e-177 624.8 474 71.7
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 9.2e-177 624.0 473 69.1
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.2e-176 623.6 471 71.8
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 1.6e-176 623.2 471 71.8
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 7.8e-176 620.9 472 70.6
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 2.3e-175 619.4 474 70.9
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 6.6e-175 617.8 472 69.3
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 9.5e-174 614.0 488 67.0
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 1.6e-173 613.2 473 69.3
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 1.6e-173 613.2 473 69.3
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 2.8e-173 612.5 472 70.3
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 5.2e-172 608.2 472 69.7
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 4.4e-171 605.1 484 66.7
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 1.3e-170 603.6 471 68.8
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 1.7e-170 603.2 501 65.5
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 2.9e-170 602.4 473 67.2
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 4.9e-170 601.7 460 69.3
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 1.1e-169 600.5 500 65.6
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 2.4e-169 599.4 470 68.3
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 4.1e-169 598.6 459 69.1
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 7.1e-169 597.8 472 68.2
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 1.3e-167 593.6 481 67.6
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 1.7e-167 593.2 474 66.7
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 4.3e-166 588.6 492 64.2
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 4.7e-165 585.1 463 68.3
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 3.1e-164 582.4 472 65.7
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 3.1e-164 582.4 462 67.3
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 7.6e-163 577.8 479 64.9
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 9.9e-163 577.4 465 66.2
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 2.2e-162 576.2 466 67.4
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 2.2e-162 576.2 472 64.6
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 1.4e-161 573.5 466 67.2
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.9e-161 573.2 474 65.0
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 4.2e-161 572.0 472 64.8
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 1.0e-159 567.4 473 64.1
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 1.7e-159 566.6 467 64.7
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 1.1e-158 563.9 464 65.1
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 3.3e-158 562.4 464 64.9
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 3.3e-158 562.4 465 64.7
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 4.3e-158 562.0 466 66.5
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 7.3e-158 561.2 419 70.4
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 7.3e-158 561.2 471 64.3
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 1.6e-157 560.1 464 64.7
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 2.1e-157 559.7 472 65.0
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 4.8e-157 558.5 472 65.9
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 1.4e-156 557.0 464 64.4
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 9.0e-156 554.3 467 63.4
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 1.2e-155 553.9 462 63.2
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.2e-155 553.9 465 63.7
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 5.8e-155 551.6 491 63.3
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 9.9e-155 550.8 463 63.7
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 3.8e-154 548.9 460 63.7
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 6.4e-154 548.1 467 65.1
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 4.6e-152 542.0 463 63.1
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 2.3e-151 539.7 406 69.2
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 3.0e-151 539.3 458 63.3
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 1.9e-150 536.6 467 61.0
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 4.3e-150 535.4 463 62.0
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 9.6e-150 534.3 437 68.6
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 1.6e-149 533.5 473 60.9
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 1.6e-149 533.5 467 60.8
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 2.1e-149 533.1 488 59.0
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 6.2e-149 531.6 480 60.2
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 8.1e-149 531.2 472 61.2
Haze_01888 Corylus avellana HOM05D006261 ORTHO05D007979 9.0e-148 527.7 304 93.8
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 4.5e-147 525.4 433 65.4
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 3.2e-145 519.2 425 66.8
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 2.1e-144 516.5 493 57.8
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 2.1e-144 516.5 376 71.5
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 1.3e-141 507.3 469 58.0
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 6.9e-140 501.5 481 57.6
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 2.3e-135 486.5 482 56.0
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 1.9e-134 483.4 488 55.1
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 5.3e-132 475.3 387 65.6
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 6.9e-132 474.9 323 77.4
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 5.0e-130 468.8 370 69.2
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 3.9e-127 459.1 317 76.7
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 2.8e-125 453.0 471 52.7
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 4.1e-124 449.1 471 52.9
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 8.5e-122 441.4 337 70.0
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 1.4e-121 440.7 461 52.3
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 1.4e-119 434.1 480 50.2
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 1.5e-115 420.6 467 51.4
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 7.4e-110 401.7 510 48.6
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.2e-107 394.4 353 60.9
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 3.5e-107 392.9 335 63.3
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 2.8e-101 373.2 361 55.7
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 1.7e-98 364.0 323 62.8
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 1.4e-87 327.8 267 65.2
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 5.7e-86 322.4 343 54.2
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 3.8e-82 309.7 482 38.4
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 6.6e-82 308.9 219 70.8
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 2.1e-72 277.3 431 40.8
RcHm_v2.0_Chr6g0252951 Rosa chinensis HOM05D006261 ORTHO05D007979 7.8e-67 258.8 342 50.0
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 6.4e-61 239.2 484 35.3
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 1.0e-50 205.3 160 67.5
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 2.5e-49 200.7 490 32.4
Glyma.20G009900 Glycine max HOM05D006261 ORTHO05D007979 1.8e-47 194.5 197 56.3
MBI15_g16863_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 9.0e-31 139.0 126 61.9
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 1.2e-27 128.6 500 25.0
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 8.7e-26 122.5 143 50.3
Dinv42128 Davidia involucrata HOM05D006261 ORTHO05D007979 1.9e-25 121.3 380 32.1
DCAR_022063 Daucus carota HOM05D006261 ORTHO05D007979 1.1e-23 115.5 84 70.2
BcaB01g01387 Brassica carinata HOM05D006261 ORTHO05D007979 3.1e-23 114.0 81 69.1
BcaB01g01385 Brassica carinata HOM05D006261 ORTHO05D007979 1.2e-22 112.1 81 69.1
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 1.2e-22 112.1 396 25.8
BcaB06g27277 Brassica carinata HOM05D006261 ORTHO05D007979 2.6e-22 110.9 82 70.7
CBR_g53672 Chara braunii HOM05D000019 ORTHO05D000353 2.2e-21 107.8 430 24.2
SHI05383 Sapria himalayana HOM05D006261 ORTHO05D007979 2.3e-18 97.8 100 54.0
CAN.G93.11 Capsicum annuum HOM05D006261 ORTHO05D007979 2.0e-14 84.7 102 47.1
Lj1g0009361 Lotus japonicus HOM05D041574 ORTHO05D236155 5.5e-12 76.6 72 54.2
Lj5g0023620 Lotus japonicus HOM05D041574 ORTHO05D236101 1.3e-10 72.0 72 51.4
SEGI_04453 Sequoiadendron giganteum HOM05D006261 ORTHO05D386652 7.7e-06 56.2 40 67.5


User provided reference genes

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