Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01788 Corylus avellana HOM05D005454 ORTHO05D006781 2.8e-35 151.4 75 100.0
Haze_08480 Corylus avellana HOM05D005454 ORTHO05D006781 2.2e-32 141.7 70 97.1
Cfa017755 Carpinus fangiana HOM05D005454 ORTHO05D006781 3.8e-32 141.0 68 100.0
Haze_18487 Corylus avellana HOM05D005454 ORTHO05D006781 5.0e-32 140.6 70 97.1
COL.COLO4_19518 Corchorus olitorius HOM05D005454 ORTHO05D006781 1.4e-29 132.5 72 84.7
Thecc.02G245200 Theobroma cacao HOM05D005454 ORTHO05D006781 1.5e-28 129.0 72 80.6
Gohir.A02G014000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 2.0e-28 128.6 72 79.2
Gohir.D01G133900 Gossypium hirsutum HOM05D005454 ORTHO05D006781 3.3e-28 127.9 72 79.2
Gorai.002G165600 Gossypium raimondii HOM05D005454 ORTHO05D006781 3.3e-28 127.9 72 79.2
CiPaw.15G112200 Carya illinoinensis HOM05D005454 ORTHO05D006781 1.7e-27 125.6 71 80.3
Duzib251G0225 Durio zibethinus HOM05D005454 ORTHO05D006781 2.8e-27 124.8 72 76.4
Duzib248G0167 Durio zibethinus HOM05D005454 ORTHO05D006781 3.7e-27 124.4 72 77.8
Potri.008G081400 Populus trichocarpa HOM05D005454 ORTHO05D006781 3.7e-27 124.4 72 76.4
CiPaw.15G112600 Carya illinoinensis HOM05D005454 ORTHO05D006781 4.8e-27 124.0 67 83.6
CiPaw.15G112400 Carya illinoinensis HOM05D005454 ORTHO05D006781 1.4e-26 122.5 68 80.9
QL04p094645 Quercus lobata HOM05D005454 ORTHO05D006781 1.4e-26 122.5 72 76.4
QL04p094846 Quercus lobata HOM05D005454 ORTHO05D006781 1.4e-26 122.5 72 76.4
TWI59G0830 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 1.4e-26 122.5 72 75.0
CAN.G710.29 Capsicum annuum HOM05D005454 ORTHO05D006781 2.4e-26 121.7 72 75.0
Atru.chr1.44 Acer truncatum HOM05D005454 ORTHO05D006781 3.1e-26 121.3 72 73.6
Gohir.A03G171875 Gossypium hirsutum HOM05D005454 ORTHO05D006781 5.3e-26 120.6 72 76.4
TWI38G1327 Tripterygium wilfordii HOM05D005454 ORTHO05D006781 5.3e-26 120.6 72 73.6
BcaC08g45360 Brassica carinata HOM05D005454 ORTHO05D006781 7.0e-26 120.2 72 70.8
A07p27170 Brassica napus HOM05D005454 ORTHO05D006781 7.0e-26 120.2 72 70.8
C06p29920 Brassica napus HOM05D005454 ORTHO05D006781 7.0e-26 120.2 72 70.8
BraA07t30361Z Brassica rapa HOM05D005454 ORTHO05D006781 7.0e-26 120.2 72 70.8
Manes.16G045300 Manihot esculenta HOM05D005454 ORTHO05D006781 9.1e-26 119.8 72 73.6
BolC6t38153H Brassica oleracea HOM05D005454 ORTHO05D006781 1.5e-25 119.0 72 70.8
PGSC0003DMG400011901 Solanum tuberosum HOM05D005454 ORTHO05D006781 1.5e-25 119.0 72 72.2
GSVIVG01036708001 Vitis vinifera HOM05D005454 ORTHO05D006781 1.5e-25 119.0 72 72.2
Thhalv10019255m.g Eutrema salsugineum HOM05D005454 ORTHO05D006781 2.0e-25 118.6 72 69.4
Sabra10G0134500 Salix brachista HOM05D005454 ORTHO05D006781 2.0e-25 118.6 68 77.9
BcaB02g07212 Brassica carinata HOM05D005454 ORTHO05D006781 2.6e-25 118.2 72 69.4
BraA07t31955Z Brassica rapa HOM05D005454 ORTHO05D006781 2.6e-25 118.2 72 69.4
Peaxi162Scf00286g00452 Petunia axillaris HOM05D005454 ORTHO05D006781 2.6e-25 118.2 72 72.2
BcaC08g47498 Brassica carinata HOM05D005454 ORTHO05D006781 3.5e-25 117.9 72 69.4
C06p53270 Brassica napus HOM05D005454 ORTHO05D006781 3.5e-25 117.9 72 69.4
BolC6t40345H Brassica oleracea HOM05D005454 ORTHO05D006781 3.5e-25 117.9 72 69.4
Nn7g38402 Nelumbo nucifera HOM05D005454 ORTHO05D006781 3.5e-25 117.9 71 73.2
TAR626G0894 Trochodendron aralioides HOM05D005454 ORTHO05D006781 4.5e-25 117.5 72 69.4
Solyc09g098140.4 Solanum lycopersicum HOM05D005454 ORTHO05D006781 5.9e-25 117.1 72 70.8
Sopen09g036090 Solanum pennellii HOM05D005454 ORTHO05D006781 5.9e-25 117.1 72 70.8
Actinidia00854 Actinidia chinensis HOM05D005454 ORTHO05D006781 1.0e-24 116.3 74 67.6
A07p44460 Brassica napus HOM05D005454 ORTHO05D006781 1.0e-24 116.3 68 73.5
ClCG02G018790 Citrullus lanatus HOM05D005454 ORTHO05D006781 1.0e-24 116.3 72 72.2
SGA_v2.0_scaffold186G40175 Striga asiatica HOM05D005454 ORTHO05D006781 1.0e-24 116.3 72 72.2
Cpa.g.sc32.137 Carica papaya HOM05D005454 ORTHO05D006781 1.3e-24 115.9 72 66.7
Hma1.2p1_0151F.1_g066990 Hydrangea macrophylla HOM05D005454 ORTHO05D006781 1.7e-24 115.5 68 76.5
Oeu029453.1 Olea europaea HOM05D005454 ORTHO05D006781 1.7e-24 115.5 72 69.4
Ciclev10006210m.g Citrus clementina HOM05D005454 ORTHO05D006781 2.2e-24 115.2 72 66.7
Sabra08G0060600 Salix brachista HOM05D005454 ORTHO05D006781 2.9e-24 114.8 72 69.4
unitig_32.g11075 Utricularia gibba HOM05D005454 ORTHO05D006781 2.9e-24 114.8 72 66.7
Carub.0002s2625 Capsella rubella HOM05D005454 ORTHO05D006781 3.8e-24 114.4 72 68.1
Aa31LG4G1640 Aethionema arabicum HOM05D005454 ORTHO05D006781 5.0e-24 114.0 72 66.7
CSS0036802 Camellia sinensis var. sinensis HOM05D005454 ORTHO05D006781 5.0e-24 114.0 67 73.1
Migut.M01498 Erythranthe guttata HOM05D005454 ORTHO05D006781 5.0e-24 114.0 72 68.1
Rhsim04G0003500 Rhododendron simsii HOM05D005454 ORTHO05D006781 6.5e-24 113.6 68 75.0
Sed0024280 Sechium edule HOM05D005454 ORTHO05D006781 6.5e-24 113.6 71 70.4
PGR102G3369 Punica granatum HOM05D005454 ORTHO05D006781 8.5e-24 113.2 72 66.7
vmacro09764 Vaccinium macrocarpon HOM05D005454 ORTHO05D006781 8.5e-24 113.2 72 69.4
CANSAT56G0738 Cannabis sativa HOM05D005454 ORTHO05D006781 1.1e-23 112.8 69 68.1
CANSAT56G1199 Cannabis sativa HOM05D005454 ORTHO05D006781 1.1e-23 112.8 69 68.1
Cc00_g09040 Coffea canephora HOM05D005454 ORTHO05D006781 1.1e-23 112.8 72 65.3
Nitab4.5_0004200g0060 Nicotiana tabacum HOM05D005454 ORTHO05D006781 1.1e-23 112.8 72 66.7
Nitab4.5_0006630g0030 Nicotiana tabacum HOM05D005454 ORTHO05D006781 1.1e-23 112.8 72 66.7
SalBow8G4406 Salvia bowleyana HOM05D005454 ORTHO05D006781 1.4e-23 112.5 72 66.7
SalBow8G5040 Salvia bowleyana HOM05D005454 ORTHO05D006781 1.4e-23 112.5 72 66.7
THA.LOC104808143 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 1.4e-23 112.5 72 68.1
THA.LOC104812391 Tarenaya hassleriana HOM05D005454 ORTHO05D006781 1.9e-23 112.1 72 68.1
Eucgr.F04477 Eucalyptus grandis HOM05D005454 ORTHO05D006781 2.5e-23 111.7 72 69.4
Nn7g38396 Nelumbo nucifera HOM05D005454 ORTHO05D006781 3.2e-23 111.3 65 75.4
HanXRQChr13g0408901 Helianthus annuus HOM05D005454 ORTHO05D006781 4.2e-23 110.9 72 66.7
HanXRQChr13g0408931 Helianthus annuus HOM05D005454 ORTHO05D006781 4.2e-23 110.9 72 66.7
Prupe.4G126700 Prunus persica HOM05D005454 ORTHO05D006781 4.2e-23 110.9 72 68.1
Os02g0495900 Oryza sativa ssp. japonica HOM05D005454 ORTHO05D006781 5.5e-23 110.5 72 66.7
Zm00001eb241290 Zea mays HOM05D005454 ORTHO05D006781 5.5e-23 110.5 72 68.1
AT1G79390 Arabidopsis thaliana HOM05D005454 ORTHO05D006781 7.2e-23 110.2 72 63.9
CsaV3_6G013400 Cucumis sativus L. HOM05D005454 ORTHO05D006781 2.1e-22 108.6 72 65.3
Lsat_1_v5_gn_5_184081 Lactuca sativa HOM05D005454 ORTHO05D006781 2.1e-22 108.6 72 63.9
Glyma.01G216400 Glycine max HOM05D005454 ORTHO05D006781 3.6e-22 107.8 63 74.6
Glyma.11G026500 Glycine max HOM05D005454 ORTHO05D006781 4.7e-22 107.5 63 73.0
MD10G1217600 Malus domestica HOM05D005454 ORTHO05D006781 4.7e-22 107.5 72 66.7
Phvul.002G154100 Phaseolus vulgaris HOM05D005454 ORTHO05D006781 8.0e-22 106.7 63 73.0
AL2G40000 Arabidopsis lyrata HOM05D005454 ORTHO05D006781 1.0e-21 106.3 69 63.8
arahy.Tifrunner.gnm1.ann1.TLTS2V Arachis hypogaea HOM05D005454 ORTHO05D006781 1.0e-21 106.3 63 74.6
arahy.Tifrunner.gnm1.ann1.DLUG3E Arachis hypogaea HOM05D005454 ORTHO05D006781 1.8e-21 105.5 58 79.3
MSTRG.16083 Avicennia marina HOM05D005454 ORTHO05D006781 1.8e-21 105.5 65 70.8
HPP92_015989 Vanilla planifolia HOM05D005454 ORTHO05D006781 2.3e-21 105.1 72 63.9
Aqoxy1G01376 Aquilegia oxysepala HOM05D005454 ORTHO05D006781 3.9e-21 104.4 67 67.2
Dinv42456 Davidia involucrata HOM05D005454 ORTHO05D006781 6.7e-21 103.6 63 71.4
VMungo1215G2509 Vigna mungo HOM05D005454 ORTHO05D006781 6.7e-21 103.6 63 71.4
CARHR073040 Cardamine hirsuta HOM05D005454 ORTHO05D006781 8.8e-21 103.2 59 78.0
MELO3C019617.2 Cucumis melo HOM05D005454 ORTHO05D006781 1.1e-20 102.8 67 70.1
Psat4g141200 Pisum sativum HOM05D005454 ORTHO05D006781 1.5e-20 102.4 63 69.8
RcHm_v2.0_Chr5g0023201 Rosa chinensis HOM05D005454 ORTHO05D006781 1.5e-20 102.4 69 66.7
Lalb_Chr03g0031911 Lupinus albus HOM05D005454 ORTHO05D006781 2.0e-20 102.1 63 71.4
Ah.02g115510 Amaranthus hybridus HOM05D005454 ORTHO05D006781 2.6e-20 101.7 72 59.7
ATR0820G041 Amborella trichopoda HOM05D005454 ORTHO05D006781 2.6e-20 101.7 72 59.7
PSO675G7587 Papaver somniferum HOM05D005454 ORTHO05D006781 5.7e-20 100.5 69 62.3
Lj3g0001328 Lotus japonicus HOM05D005454 ORTHO05D006781 9.7e-20 99.8 63 68.3
Hund10936 Selenicereus undatus HOM05D005454 ORTHO05D006781 9.7e-20 99.8 69 59.4
TPR.G8202 Trifolium pratense HOM05D005454 ORTHO05D006781 9.7e-20 99.8 63 66.7
Ca_26272_v3 Cicer arietinum L. HOM05D005454 ORTHO05D006781 1.3e-19 99.4 63 66.7
ECA240G0828 Erigeron canadensis HOM05D005454 ORTHO05D006781 1.7e-19 99.0 72 59.7
Medtr8g447300 Medicago truncatula HOM05D005454 ORTHO05D006781 1.7e-19 99.0 63 66.7
FvH4_3g13970 Fragaria vesca HOM05D005454 ORTHO05D006781 3.7e-19 97.8 69 62.3
FAN11G3450 Fragaria x ananassa HOM05D005454 ORTHO05D006781 3.7e-19 97.8 69 62.3
FAN16G0850 Fragaria x ananassa HOM05D005454 ORTHO05D006781 3.7e-19 97.8 69 62.3
FAN21G1174 Fragaria x ananassa HOM05D005454 ORTHO05D006781 3.7e-19 97.8 69 62.3
Sc18g0003140 Simmondsia chinensis HOM05D005454 ORTHO05D006781 8.2e-19 96.7 66 60.6
EL10Ac5g12502 Beta vulgaris HOM05D005454 ORTHO05D006781 2.4e-18 95.1 72 56.9
AUR62030518 Chenopodium quinoa HOM05D005454 ORTHO05D006781 2.4e-18 95.1 72 59.7
AUR62030774 Chenopodium quinoa HOM05D005454 ORTHO05D006781 3.1e-18 94.7 72 58.3
FAN25G3791 Fragaria x ananassa HOM05D005454 ORTHO05D006781 7.0e-18 93.6 69 59.4
MD05G1239400 Malus domestica HOM05D005454 ORTHO05D006781 9.1e-18 93.2 62 64.5
MBI13_g09219_MAGBIO Magnolia biondii HOM05D005454 ORTHO05D006781 3.5e-17 91.3 78 55.1
SEGI_00588 Sequoiadendron giganteum HOM05D005454 ORTHO05D006781 2.7e-14 81.6 72 47.2
RcHm_v2.0_Chr5g0023191 Rosa chinensis HOM05D005454 ORTHO05D006781 3.0e-13 78.2 69 53.6
AagrBONN_evm.TU.Sc2ySwM_117.1988 Anthoceros agrestis HOM05D005454 ORTHO05D006781 9.1e-10 66.6 74 41.9
Pp3c27_5100 Physcomitrium patens HOM05D005454 ORTHO05D006781 5.9e-09 63.9 72 40.3
SGA_v2.0_scaffold29G12256 Striga asiatica HOM05D005454 ORTHO05D006781 1.9e-07 58.9 46 56.5
Gohir.A04G138000 Gossypium hirsutum HOM05D005454 ORTHO05D006781 5.5e-07 57.4 58 50.0
Mapoly0011s0156 Marchantia polymorpha HOM05D005454 ORTHO05D006781 9.4e-07 56.6 72 33.3
DCAR_013713 Daucus carota HOM05D005454 ORTHO05D006781 1.2e-06 56.2 57 47.4


User provided reference genes

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