Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01750 Corylus avellana HOM05D000159 ORTHO05D034909 1.5e-46 189.1 93 100.0
Cfa004887 Carpinus fangiana HOM05D000159 ORTHO05D002729 2.8e-24 115.2 78 76.9
Haze_05125 Corylus avellana HOM05D000159 ORTHO05D002729 3.6e-24 114.8 78 75.6
QL12p034448 Quercus lobata HOM05D000159 ORTHO05D002729 1.1e-20 103.2 77 67.5
Manes.05G010400 Manihot esculenta HOM05D000159 ORTHO05D002729 4.6e-19 97.8 75 65.3
Dinv12094 Davidia involucrata HOM05D000159 ORTHO05D002729 3.9e-18 94.7 79 62.0
Nn3g21895 Nelumbo nucifera HOM05D000159 ORTHO05D002729 6.6e-18 94.0 77 59.7
Dinv33162 Davidia involucrata HOM05D000159 ORTHO05D002729 8.6e-18 93.6 79 62.0
CiPaw.08G084300 Carya illinoinensis HOM05D000159 ORTHO05D002729 1.1e-17 93.2 77 62.3
Cpa.g.sc181.10 Carica papaya HOM05D000159 ORTHO05D002729 5.6e-17 90.9 77 61.0
Potri.002G188700 Populus trichocarpa HOM05D000159 ORTHO05D002729 1.2e-16 89.7 79 60.8
THA.LOC104827654 Tarenaya hassleriana HOM05D000159 ORTHO05D002729 1.2e-16 89.7 73 61.6
THA.LOC104827691 Tarenaya hassleriana HOM05D000159 ORTHO05D002729 1.2e-16 89.7 73 61.6
Thecc.01G323200 Theobroma cacao HOM05D000159 ORTHO05D002729 3.6e-16 88.2 77 62.3
Gohir.D11G108100 Gossypium hirsutum HOM05D000159 ORTHO05D002729 6.2e-16 87.4 77 61.0
TAR362G1270 Trochodendron aralioides HOM05D000159 ORTHO05D002729 6.2e-16 87.4 73 63.0
Actinidia21351 Actinidia chinensis HOM05D000159 ORTHO05D002729 8.1e-16 87.0 89 57.3
PGR042G3374 Punica granatum HOM05D000159 ORTHO05D002729 8.1e-16 87.0 67 65.7
Duzib133G0518 Durio zibethinus HOM05D000159 ORTHO05D002729 1.4e-15 86.3 77 61.0
Duzib211G0455 Durio zibethinus HOM05D000159 ORTHO05D002729 1.4e-15 86.3 77 62.3
TAR633G1629 Trochodendron aralioides HOM05D000159 ORTHO05D002729 1.4e-15 86.3 82 58.5
Gohir.A08G037400 Gossypium hirsutum HOM05D000159 ORTHO05D002729 1.8e-15 85.9 81 58.0
Manes.01G233400 Manihot esculenta HOM05D000159 ORTHO05D002729 1.8e-15 85.9 74 59.5
Dinv29517 Davidia involucrata HOM05D000159 ORTHO05D002729 2.4e-15 85.5 72 59.7
THA.LOC104827653 Tarenaya hassleriana HOM05D000159 ORTHO05D002729 2.4e-15 85.5 73 58.9
CSS0037326 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 3.1e-15 85.1 72 58.3
ClCG10G011820 Citrullus lanatus HOM05D000159 ORTHO05D002729 3.1e-15 85.1 80 61.2
MELO3C012909.2 Cucumis melo HOM05D000159 ORTHO05D002729 3.1e-15 85.1 80 61.2
CsaV3_3G031570 Cucumis sativus L. HOM05D000159 ORTHO05D002729 3.1e-15 85.1 80 61.2
Gorai.007G116100 Gossypium raimondii HOM05D000159 ORTHO05D002729 4.0e-15 84.7 77 59.7
Gohir.A11G103700 Gossypium hirsutum HOM05D000159 ORTHO05D002729 5.2e-15 84.3 77 58.4
Ciclev10018697m.g Citrus clementina HOM05D000159 ORTHO05D002729 8.9e-15 83.6 76 59.2
Sed0026865 Sechium edule HOM05D000159 ORTHO05D002729 8.9e-15 83.6 80 58.8
TAR365G1217 Trochodendron aralioides HOM05D000159 ORTHO05D002729 1.2e-14 83.2 72 55.6
TAR636G1610 Trochodendron aralioides HOM05D000159 ORTHO05D002729 1.5e-14 82.8 72 56.9
Gohir.D08G047700 Gossypium hirsutum HOM05D000159 ORTHO05D002729 2.0e-14 82.4 81 55.6
Gorai.004G047200 Gossypium raimondii HOM05D000159 ORTHO05D002729 2.0e-14 82.4 81 55.6
Gohir.D12G124700 Gossypium hirsutum HOM05D000159 ORTHO05D002729 2.6e-14 82.0 76 60.5
Gorai.008G135700 Gossypium raimondii HOM05D000159 ORTHO05D002729 2.6e-14 82.0 76 60.5
Duzib138G1731 Durio zibethinus HOM05D000159 ORTHO05D002729 4.4e-14 81.3 77 58.4
CiPaw.07G123900 Carya illinoinensis HOM05D000159 ORTHO05D002729 7.6e-14 80.5 72 55.6
Gohir.A12G120900 Gossypium hirsutum HOM05D000159 ORTHO05D002729 7.6e-14 80.5 76 59.2
Atru.chr4.3133 Acer truncatum HOM05D000159 ORTHO05D002729 9.9e-14 80.1 72 54.2
Hma1.2p1_0484F.1_g162900 Hydrangea macrophylla HOM05D000159 ORTHO05D002729 9.9e-14 80.1 79 55.7
Hund12248 Selenicereus undatus HOM05D000159 ORTHO05D002729 9.9e-14 80.1 78 51.3
VMungo0720G0292 Vigna mungo HOM05D000159 ORTHO05D002729 9.9e-14 80.1 71 62.0
Glyma.02G008600 Glycine max HOM05D000159 ORTHO05D002729 1.3e-13 79.7 71 62.0
Phvul.007G210600 Phaseolus vulgaris HOM05D000159 ORTHO05D002729 1.7e-13 79.3 71 62.0
Potri.014G114300 Populus trichocarpa HOM05D000159 ORTHO05D002729 2.9e-13 78.6 79 57.0
CiPaw.01G130200 Carya illinoinensis HOM05D000159 ORTHO05D002729 4.9e-13 77.8 74 54.1
Glyma.15G190200 Glycine max HOM05D000159 ORTHO05D002729 4.9e-13 77.8 68 57.4
Sabra02G0166600 Salix brachista HOM05D000159 ORTHO05D002729 4.9e-13 77.8 79 55.7
COL.COLO4_23150 Corchorus olitorius HOM05D000159 ORTHO05D002729 6.4e-13 77.4 66 65.2
Glyma.09G082000 Glycine max HOM05D000159 ORTHO05D002729 6.4e-13 77.4 71 53.5
Medtr1g086250 Medicago truncatula HOM05D000159 ORTHO05D002729 1.1e-12 76.6 71 57.7
Psat6g160520 Pisum sativum HOM05D000159 ORTHO05D002729 1.4e-12 76.3 71 56.3
arahy.Tifrunner.gnm1.ann1.5CG51V Arachis hypogaea HOM05D000159 ORTHO05D002729 1.9e-12 75.9 67 62.7
MBI19_g32725_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D002729 1.9e-12 75.9 73 47.9
Sabra14G0084400 Salix brachista HOM05D000159 ORTHO05D002729 1.9e-12 75.9 79 54.4
Manes.03G211200 Manihot esculenta HOM05D000159 ORTHO05D002729 4.2e-12 74.7 72 52.8
Haze_00782 Corylus avellana HOM05D000159 ORTHO05D002729 5.4e-12 74.3 74 51.4
Haze_00787 Corylus avellana HOM05D000159 ORTHO05D002729 5.4e-12 74.3 74 51.4
Migut.D00024 Erythranthe guttata HOM05D000159 ORTHO05D002729 5.4e-12 74.3 79 51.9
CSS0024125 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 7.1e-12 73.9 71 53.5
Cfa021286 Carpinus fangiana HOM05D000159 ORTHO05D002729 7.1e-12 73.9 74 50.0
FAN12G3930 Fragaria x ananassa HOM05D000159 ORTHO05D002729 7.1e-12 73.9 71 53.5
Sed0010875 Sechium edule HOM05D000159 ORTHO05D002729 7.1e-12 73.9 68 60.3
vmacro02366 Vaccinium macrocarpon HOM05D000159 ORTHO05D002729 7.1e-12 73.9 68 55.9
CSS0037275 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 9.3e-12 73.6 74 56.8
MSTRG.18064 Avicennia marina HOM05D000159 ORTHO05D002729 1.2e-11 73.2 79 50.6
MSTRG.24838 Avicennia marina HOM05D000159 ORTHO05D002729 1.2e-11 73.2 75 54.7
Thhalv10001295m.g Eutrema salsugineum HOM05D000159 ORTHO05D002729 2.1e-11 72.4 73 56.2
FAN07G2474 Fragaria x ananassa HOM05D000159 ORTHO05D002729 2.7e-11 72.0 71 52.1
RcHm_v2.0_Chr4g0427341 Rosa chinensis HOM05D000159 ORTHO05D002729 2.7e-11 72.0 73 52.1
Ah.02g112670 Amaranthus hybridus HOM05D000159 ORTHO05D002729 3.5e-11 71.6 76 48.7
Lj3A839T54 Lonicera japonica HOM05D000159 ORTHO05D002729 3.5e-11 71.6 72 51.4
Rhsim04G0247600 Rhododendron simsii HOM05D000159 ORTHO05D002729 3.5e-11 71.6 60 60.0
Rhsim13G0000500 Rhododendron simsii HOM05D000159 ORTHO05D002729 3.5e-11 71.6 79 49.4
Sc17g0000130 Simmondsia chinensis HOM05D000159 ORTHO05D002729 3.5e-11 71.6 67 56.7
Actinidia18503 Actinidia chinensis HOM05D000159 ORTHO05D002729 6.0e-11 70.9 68 54.4
CARHR142430 Cardamine hirsuta HOM05D000159 ORTHO05D002729 6.0e-11 70.9 82 50.0
Eucgr.A01019 Eucalyptus grandis HOM05D000159 ORTHO05D002729 6.0e-11 70.9 84 46.4
Peaxi162Scf00126g01131 Petunia axillaris HOM05D000159 ORTHO05D002729 6.0e-11 70.9 77 50.6
arahy.Tifrunner.gnm1.ann1.XS47FH Arachis hypogaea HOM05D000159 ORTHO05D002729 7.8e-11 70.5 77 44.2
Carub.0004s2981 Capsella rubella HOM05D000159 ORTHO05D002729 7.8e-11 70.5 72 54.2
Phvul.009G219200 Phaseolus vulgaris HOM05D000159 ORTHO05D002729 1.0e-10 70.1 67 52.2
Potri.010G154000 Populus trichocarpa HOM05D000159 ORTHO05D002729 1.0e-10 70.1 73 52.1
RcHm_v2.0_Chr4g0427351 Rosa chinensis HOM05D000159 ORTHO05D002729 1.0e-10 70.1 71 50.7
Thecc.04G311800 Theobroma cacao HOM05D000159 ORTHO05D002729 1.0e-10 70.1 78 47.4
VMungo1309G1463 Vigna mungo HOM05D000159 ORTHO05D002729 1.0e-10 70.1 67 52.2
MSTRG.21745 Avicennia marina HOM05D000159 ORTHO05D002729 1.3e-10 69.7 73 50.7
FAN17G0146 Fragaria x ananassa HOM05D000159 ORTHO05D002729 1.3e-10 69.7 71 49.3
FAN17G2719 Fragaria x ananassa HOM05D000159 ORTHO05D002729 1.3e-10 69.7 73 49.3
Prupe.1G106600 Prunus persica HOM05D000159 ORTHO05D002729 1.3e-10 69.7 68 52.9
Sabra10G0118600 Salix brachista HOM05D000159 ORTHO05D002729 1.3e-10 69.7 73 52.1
PGSC0003DMG400005196 Solanum tuberosum HOM05D000159 ORTHO05D002729 1.3e-10 69.7 76 52.6
AL4G46570 Arabidopsis lyrata HOM05D000159 ORTHO05D002729 1.7e-10 69.3 72 52.8
Glyma.10G009200 Glycine max HOM05D000159 ORTHO05D002729 1.7e-10 69.3 74 56.8
Lalb_Chr11g0073521 Lupinus albus HOM05D000159 ORTHO05D002729 1.7e-10 69.3 76 48.7
Prupe.1G106500 Prunus persica HOM05D000159 ORTHO05D002729 1.7e-10 69.3 72 50.0
TPR.G3043 Trifolium pratense HOM05D000159 ORTHO05D002729 1.7e-10 69.3 76 51.3
Actinidia02541 Actinidia chinensis HOM05D000159 ORTHO05D002729 2.3e-10 68.9 77 51.9
Lj5g0024810 Lotus japonicus HOM05D000159 ORTHO05D002729 2.3e-10 68.9 70 51.4
CiPaw.02G070500 Carya illinoinensis HOM05D000159 ORTHO05D002729 3.0e-10 68.6 74 50.0
MD16G1137600 Malus domestica HOM05D000159 ORTHO05D002729 3.0e-10 68.6 75 49.3
FAN12G2890 Fragaria x ananassa HOM05D000159 ORTHO05D002729 3.9e-10 68.2 73 47.9
Gorai.005G071400 Gossypium raimondii HOM05D000159 ORTHO05D002729 3.9e-10 68.2 77 48.1
Lalb_Chr02g0147041 Lupinus albus HOM05D000159 ORTHO05D002729 3.9e-10 68.2 78 51.3
vmacro08005 Vaccinium macrocarpon HOM05D000159 ORTHO05D002729 3.9e-10 68.2 60 60.0
arahy.Tifrunner.gnm1.ann1.W095Z9 Arachis hypogaea HOM05D000159 ORTHO05D002729 5.1e-10 67.8 73 43.8
EL10Ac4g09048 Beta vulgaris HOM05D000159 ORTHO05D002729 5.1e-10 67.8 80 48.8
CSS0001928 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 5.1e-10 67.8 72 51.4
CSS0037020 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D002729 5.1e-10 67.8 72 51.4
FvH4_4g21420 Fragaria vesca HOM05D000159 ORTHO05D002729 5.1e-10 67.8 71 47.9
Sopen01g030050 Solanum pennellii HOM05D000159 ORTHO05D002729 5.1e-10 67.8 74 52.7
CANSAT25G1789 Cannabis sativa HOM05D000159 ORTHO05D002729 6.6e-10 67.4 76 52.6
TWI59G0684 Tripterygium wilfordii HOM05D000159 ORTHO05D002729 8.7e-10 67.0 78 51.3
GSVIVG01028208001 Vitis vinifera HOM05D000159 ORTHO05D002729 8.7e-10 67.0 55 54.5
Lalb_Chr08g0233051 Lupinus albus HOM05D000159 ORTHO05D002729 1.1e-09 66.6 74 52.7
Potri.008G098600 Populus trichocarpa HOM05D000159 ORTHO05D002729 1.1e-09 66.6 73 52.1
Ah.11g045830 Amaranthus hybridus HOM05D000159 ORTHO05D002729 1.5e-09 66.2 76 47.4
Ciclev10004227m.g Citrus clementina HOM05D000159 ORTHO05D002729 1.5e-09 66.2 60 53.3
Lalb_Chr06g0167101 Lupinus albus HOM05D000159 ORTHO05D002729 1.5e-09 66.2 75 48.0
MBI19_g32726_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D002729 1.9e-09 65.9 72 47.2
MD13G1141300 Malus domestica HOM05D000159 ORTHO05D002729 1.9e-09 65.9 78 48.7
QL06p014060 Quercus lobata HOM05D000159 ORTHO05D002729 1.9e-09 65.9 66 53.0
FAN07G1875 Fragaria x ananassa HOM05D000159 ORTHO05D002729 2.5e-09 65.5 73 46.6
MD13G1141400 Malus domestica HOM05D000159 ORTHO05D002729 3.3e-09 65.1 71 47.9
Aa31LG10G14220 Aethionema arabicum HOM05D000159 ORTHO05D002729 4.3e-09 64.7 73 50.7
Cc03_g00210 Coffea canephora HOM05D000159 ORTHO05D002729 4.3e-09 64.7 50 58.0
Ca_10248_v3 Cicer arietinum L. HOM05D000159 ORTHO05D002729 7.3e-09 63.9 72 51.4
Cpa.g.sc146.32 Carica papaya HOM05D000159 ORTHO05D002729 9.6e-09 63.5 73 46.6
TWI14G0396 Tripterygium wilfordii HOM05D000159 ORTHO05D002729 9.6e-09 63.5 78 50.0
AUR62011728 Chenopodium quinoa HOM05D000159 ORTHO05D002729 1.3e-08 63.2 73 53.4
Lj4g0017967 Lotus japonicus HOM05D000159 ORTHO05D002729 1.6e-08 62.8 66 50.0
Sc25g0001760 Simmondsia chinensis HOM05D000159 ORTHO05D002729 1.6e-08 62.8 72 47.2
Sabra08G0074600 Salix brachista HOM05D000159 ORTHO05D002729 2.1e-08 62.4 73 47.9
Lalb_Chr21g0309801 Lupinus albus HOM05D000159 ORTHO05D002729 2.8e-08 62.0 61 47.5
Actinidia07530 Actinidia chinensis HOM05D000159 ORTHO05D002729 6.2e-08 60.8 68 48.5
Lj6C699T17 Lonicera japonica HOM05D000159 ORTHO05D002729 6.2e-08 60.8 58 53.4
GSVIVG01017678001 Vitis vinifera HOM05D000159 ORTHO05D002729 6.2e-08 60.8 54 55.6
C04p00890 Brassica napus HOM05D000159 ORTHO05D002729 8.1e-08 60.5 60 56.7
BolC4t21727H Brassica oleracea HOM05D000159 ORTHO05D002729 8.1e-08 60.5 60 56.7
MD16G1137700 Malus domestica HOM05D000159 ORTHO05D002729 8.1e-08 60.5 71 47.9
Lsat_1_v5_gn_1_39821 Lactuca sativa HOM05D000159 ORTHO05D002729 1.1e-07 60.1 73 49.3
SalBow5G5157 Salvia bowleyana HOM05D000159 ORTHO05D034909 1.1e-07 60.1 73 45.2
DCAR_002547 Daucus carota HOM05D000159 ORTHO05D002729 1.4e-07 59.7 61 50.8
SHI19771 Sapria himalayana HOM05D000159 ORTHO05D000148 1.4e-07 59.7 64 46.9
Glyma.07G234200 Glycine max HOM05D000159 ORTHO05D002729 1.8e-07 59.3 66 45.5
Lj1C10G2 Lonicera japonica HOM05D000159 ORTHO05D002729 2.4e-07 58.9 76 48.7
AT2G47070 Arabidopsis thaliana HOM05D000159 ORTHO05D002729 5.3e-07 57.8 63 54.0
Lsat_1_v5_gn_6_117840 Lactuca sativa HOM05D000159 ORTHO05D002729 5.3e-07 57.8 65 47.7
Phvul.003G120700 Phaseolus vulgaris HOM05D000159 ORTHO05D002729 5.3e-07 57.8 59 52.5
SalBow6G7168 Salvia bowleyana HOM05D000159 ORTHO05D002729 5.3e-07 57.8 62 51.6
Oeu038065.1 Olea europaea HOM05D000159 ORTHO05D002729 6.9e-07 57.4 79 41.8
Sp4g29060 Schrenkiella parvula HOM05D000159 ORTHO05D002729 6.9e-07 57.4 53 50.9
VMungo1215G1958 Vigna mungo HOM05D000159 ORTHO05D002729 1.5e-06 56.2 67 44.8
EL10Ac5g10644 Beta vulgaris HOM05D000159 ORTHO05D002729 2.0e-06 55.8 60 53.3
CAN.G100.32 Capsicum annuum HOM05D000159 ORTHO05D002729 2.0e-06 55.8 49 51.0
Psat1g018120 Pisum sativum HOM05D000159 ORTHO05D002729 2.0e-06 55.8 45 53.3
DCAR_026953 Daucus carota HOM05D000159 ORTHO05D002729 2.6e-06 55.5 58 48.3
Medtr2g046550 Medicago truncatula HOM05D000159 ORTHO05D002729 2.6e-06 55.5 41 53.7
Sopen05g031750 Solanum pennellii HOM05D000159 ORTHO05D002729 2.6e-06 55.5 67 44.8
Solyc05g053240.4 Solanum lycopersicum HOM05D000159 ORTHO05D002729 3.4e-06 55.1 67 44.8
PGSC0003DMG400027151 Solanum tuberosum HOM05D000159 ORTHO05D002729 3.4e-06 55.1 67 44.8
Ah.07g203730 Amaranthus hybridus HOM05D000159 ORTHO05D002729 4.4e-06 54.7 43 55.8
HanXRQChr05g0148371 Helianthus annuus HOM05D000159 ORTHO05D002729 4.4e-06 54.7 57 45.6
Peaxi162Scf00164g00523 Petunia axillaris HOM05D000159 ORTHO05D002729 5.8e-06 54.3 64 46.9
unitig_8.g3102 Utricularia gibba HOM05D000159 ORTHO05D002729 5.8e-06 54.3 52 48.1
ECA246G0490 Erigeron canadensis HOM05D000159 ORTHO05D002729 7.6e-06 53.9 48 52.1
AUR62029984 Chenopodium quinoa HOM05D000159 ORTHO05D002729 9.9e-06 53.5 50 52.0


User provided reference genes

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