Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01682 Corylus avellana HOM05D006950 ORTHO05D043621 2.8e-47 191.4 85 100.0
CiPaw.04G042300 Carya illinoinensis HOM05D006950 ORTHO05D008798 7.2e-11 70.5 30 93.3
Haze_14155 Corylus avellana HOM05D006950 ORTHO05D008798 7.2e-11 70.5 30 93.3
Cfa005542 Carpinus fangiana HOM05D006950 ORTHO05D043621 1.2e-10 69.7 37 78.4
Cfa007922 Carpinus fangiana HOM05D006950 ORTHO05D008798 1.4e-09 66.2 28 92.9
ClCG03G006740 Citrullus lanatus HOM05D006950 ORTHO05D008798 3.0e-09 65.1 30 86.7
MELO3C002748.2 Cucumis melo HOM05D006950 ORTHO05D008798 3.0e-09 65.1 30 86.7
CsaV3_1G032300 Cucumis sativus L. HOM05D006950 ORTHO05D008798 3.9e-09 64.7 30 83.3
Manes.02G068900 Manihot esculenta HOM05D006950 ORTHO05D008798 3.9e-09 64.7 30 80.0
QL02p051313 Quercus lobata HOM05D006950 ORTHO05D008798 3.9e-09 64.7 30 83.3
TWI53G1811 Tripterygium wilfordii HOM05D006950 ORTHO05D008798 3.9e-09 64.7 30 83.3
Eucgr.G03073 Eucalyptus grandis HOM05D006950 ORTHO05D008798 6.7e-09 63.9 30 83.3
Sc11g0008340 Simmondsia chinensis HOM05D006950 ORTHO05D008798 6.7e-09 63.9 30 83.3
Duzib138G1034 Durio zibethinus HOM05D006950 ORTHO05D008798 8.8e-09 63.5 30 83.3
Eucgr.G03074 Eucalyptus grandis HOM05D006950 ORTHO05D008798 1.1e-08 63.2 30 83.3
MBI16_g34414_MAGBIO Magnolia biondii HOM05D006950 ORTHO05D008798 1.5e-08 62.8 30 76.7
MD17G1244700 Malus domestica HOM05D006950 ORTHO05D008798 1.5e-08 62.8 30 80.0
Phvul.008G006100 Phaseolus vulgaris HOM05D006950 ORTHO05D008798 1.5e-08 62.8 30 80.0
PGR142G3639 Punica granatum HOM05D006950 ORTHO05D008798 1.5e-08 62.8 30 83.3
Sed0021084 Sechium edule HOM05D006950 ORTHO05D008798 1.5e-08 62.8 30 83.3
VMungo1383G3190 Vigna mungo HOM05D006950 ORTHO05D008798 1.5e-08 62.8 30 80.0
Ciclev10012146m.g Citrus clementina HOM05D006950 ORTHO05D008798 1.9e-08 62.4 30 80.0
GSVIVG01031019001 Vitis vinifera HOM05D006950 ORTHO05D008798 1.9e-08 62.4 30 83.3
Gohir.A11G163600 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.5e-08 62.0 30 80.0
Gohir.D11G169900 Gossypium hirsutum HOM05D006950 ORTHO05D008798 2.5e-08 62.0 30 80.0
Gorai.007G181600 Gossypium raimondii HOM05D006950 ORTHO05D008798 2.5e-08 62.0 30 80.0
Potri.004G099300 Populus trichocarpa HOM05D006950 ORTHO05D008798 2.5e-08 62.0 30 83.3
Prupe.3G142000 Prunus persica HOM05D006950 ORTHO05D008798 2.5e-08 62.0 30 76.7
Sabra04G0080700 Salix brachista HOM05D006950 ORTHO05D008798 2.5e-08 62.0 30 83.3
CANSAT78G2296 Cannabis sativa HOM05D006950 ORTHO05D008798 3.3e-08 61.6 30 80.0
Glyma.18G296400 Glycine max HOM05D006950 ORTHO05D008798 3.3e-08 61.6 30 83.3
arahy.Tifrunner.gnm1.ann1.J0JTFL Arachis hypogaea HOM05D006950 ORTHO05D008798 4.3e-08 61.2 30 80.0
arahy.Tifrunner.gnm1.ann1.QXSY6T Arachis hypogaea HOM05D006950 ORTHO05D008798 4.3e-08 61.2 30 80.0
Peaxi162Scf00394g00061 Petunia axillaris HOM05D006950 ORTHO05D008798 4.3e-08 61.2 47 59.6
Atru.chr1.1690 Acer truncatum HOM05D006950 ORTHO05D008798 5.7e-08 60.8 30 80.0
Aa31LG9G17120 Aethionema arabicum HOM05D006950 ORTHO05D008798 5.7e-08 60.8 56 55.4
Aqoxy3G00267 Aquilegia oxysepala HOM05D006950 ORTHO05D008798 5.7e-08 60.8 30 80.0
Lj1g0016691 Lotus japonicus HOM05D006950 ORTHO05D008798 5.7e-08 60.8 30 76.7
Lalb_Chr17g0335791 Lupinus albus HOM05D006950 ORTHO05D008798 5.7e-08 60.8 30 76.7
AagrBONN_evm.TU.Sc2ySwM_362.1440 Anthoceros agrestis HOM05D006950 ORTHO05D008798 7.4e-08 60.5 30 83.3
BcaB02g08012 Brassica carinata HOM05D006950 ORTHO05D008798 7.4e-08 60.5 30 83.3
BcaC08g44377 Brassica carinata HOM05D006950 ORTHO05D008798 7.4e-08 60.5 30 83.3
C06p18110 Brassica napus HOM05D006950 ORTHO05D008798 7.4e-08 60.5 30 83.3
BolC6t37017H Brassica oleracea HOM05D006950 ORTHO05D008798 7.4e-08 60.5 30 83.3
Cpa.g.sc282.6 Carica papaya HOM05D006950 ORTHO05D008798 7.4e-08 60.5 30 80.0
Thhalv10027821m.g Eutrema salsugineum HOM05D006950 ORTHO05D008798 7.4e-08 60.5 30 83.3
Sp7g03690 Schrenkiella parvula HOM05D006950 ORTHO05D008798 7.4e-08 60.5 30 83.3
AL686U10010 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 9.7e-08 60.1 30 80.0
AL7G52260 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 9.7e-08 60.1 30 80.0
AL7G52280 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 9.7e-08 60.1 30 80.0
AL7G52300 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 9.7e-08 60.1 30 80.0
AL7G52430 Arabidopsis lyrata HOM05D006950 ORTHO05D008798 9.7e-08 60.1 30 80.0
Psat3g205440 Pisum sativum HOM05D006950 ORTHO05D008798 9.7e-08 60.1 48 56.2
THA.LOC104805569 Tarenaya hassleriana HOM05D006950 ORTHO05D008798 9.7e-08 60.1 30 80.0
TAR629G2916 Trochodendron aralioides HOM05D006950 ORTHO05D008798 9.7e-08 60.1 30 76.7
Hma1.2p1_0136F.1_g062250 Hydrangea macrophylla HOM05D006950 ORTHO05D008798 1.3e-07 59.7 30 76.7
PSO017G6790 Papaver somniferum HOM05D006950 ORTHO05D008798 1.3e-07 59.7 30 80.0
CAN.G625.25 Capsicum annuum HOM05D006950 ORTHO05D008798 1.7e-07 59.3 30 76.7
DCAR_017190 Daucus carota HOM05D006950 ORTHO05D008798 1.7e-07 59.3 30 76.7
Lj4A191T50 Lonicera japonica HOM05D006950 ORTHO05D008798 1.7e-07 59.3 30 76.7
Nitab4.5_0000659g0020 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.7e-07 59.3 30 76.7
Nitab4.5_0000912g0220 Nicotiana tabacum HOM05D006950 ORTHO05D008798 1.7e-07 59.3 30 76.7
Pp3c2_1510 Physcomitrium patens HOM05D006950 ORTHO05D008798 1.7e-07 59.3 30 76.7
PGSC0003DMG400026406 Solanum tuberosum HOM05D006950 ORTHO05D008798 1.7e-07 59.3 30 76.7
vmacro05553 Vaccinium macrocarpon HOM05D006950 ORTHO05D008798 1.7e-07 59.3 30 76.7
Hund13713 Selenicereus undatus HOM05D006950 ORTHO05D008798 2.2e-07 58.9 30 76.7
CDE06G1236 Ceratophyllum demersum HOM05D006950 ORTHO05D008798 2.8e-07 58.5 30 76.7
Actinidia36323 Actinidia chinensis HOM05D006950 ORTHO05D008798 3.7e-07 58.2 30 76.7
A07p19680 Brassica napus HOM05D006950 ORTHO05D008798 3.7e-07 58.2 30 80.0
BraA07t29668Z Brassica rapa HOM05D006950 ORTHO05D008798 3.7e-07 58.2 30 80.0
Cc07_g08790 Coffea canephora HOM05D006950 ORTHO05D008798 3.7e-07 58.2 30 73.3
Medtr7g007310 Medicago truncatula HOM05D006950 ORTHO05D008798 4.8e-07 57.8 30 73.3
TPR.G9714 Trifolium pratense HOM05D006950 ORTHO05D008798 4.8e-07 57.8 39 61.5
unitig_0.g2608 Utricularia gibba HOM05D005540 ORTHO05D006932 4.8e-07 57.8 30 76.7
AT5G38360 Arabidopsis thaliana HOM05D006950 ORTHO05D008798 6.3e-07 57.4 30 76.7
MSTRG.15296 Avicennia marina HOM05D006950 ORTHO05D008798 6.3e-07 57.4 30 76.7
Carub.0007s3770 Capsella rubella HOM05D006950 ORTHO05D008798 6.3e-07 57.4 30 73.3
Migut.L00319 Erythranthe guttata HOM05D006950 ORTHO05D008798 6.3e-07 57.4 30 76.7
ATR1125G044 Amborella trichopoda HOM05D006950 ORTHO05D008798 8.2e-07 57.0 30 73.3
CSS0013921 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 8.2e-07 57.0 30 73.3
CSS0023207 Camellia sinensis var. sinensis HOM05D006950 ORTHO05D008798 8.2e-07 57.0 30 73.3
ECA246G0391 Erigeron canadensis HOM05D006950 ORTHO05D008798 1.1e-06 56.6 30 76.7
Lsat_1_v5_gn_3_79740 Lactuca sativa HOM05D006950 ORTHO05D008798 1.1e-06 56.6 30 76.7
AUR62023300 Chenopodium quinoa HOM05D006950 ORTHO05D008798 1.4e-06 56.2 30 73.3
Dinv33949 Davidia involucrata HOM05D006950 ORTHO05D008798 1.4e-06 56.2 30 66.7
PSO478G4580 Papaver somniferum HOM05D006950 ORTHO05D008798 1.4e-06 56.2 30 76.7
Oeu007452.1 Olea europaea HOM05D006950 ORTHO05D008798 2.4e-06 55.5 30 73.3
Sopen02g030760 Solanum pennellii HOM05D006950 ORTHO05D008798 2.4e-06 55.5 30 73.3
Os04g0381400 Oryza sativa ssp. japonica HOM05D006950 ORTHO05D008798 3.1e-06 55.1 30 70.0
Thecc.04G133400 Theobroma cacao HOM05D006950 ORTHO05D008798 3.1e-06 55.1 30 76.7
Mapoly0010s0040 Marchantia polymorpha HOM05D006950 ORTHO05D008798 5.3e-06 54.3 29 69.0
Nn3g17879 Nelumbo nucifera HOM05D006950 ORTHO05D008798 5.3e-06 54.3 30 70.0
SMO232G0122 Selaginella moellendorffii HOM05D006950 ORTHO05D008798 5.3e-06 54.3 52 46.2
EL10Ac2g04564 Beta vulgaris HOM05D006950 ORTHO05D008798 9.1e-06 53.5 30 66.7
HanXRQChr15g0471491 Helianthus annuus HOM05D006950 ORTHO05D008798 9.1e-06 53.5 30 70.0


User provided reference genes

Program Settings