Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01615 Corylus avellana HOM05D005050 ORTHO05D006198 2.3e-76 288.9 151 100.0
Cfa005552 Carpinus fangiana HOM05D005050 ORTHO05D006198 3.2e-62 241.9 141 90.8
Thecc.02G041900 Theobroma cacao HOM05D005050 ORTHO05D006198 1.2e-48 196.8 129 82.2
CiPaw.05G042200 Carya illinoinensis HOM05D005050 ORTHO05D006198 2.6e-48 195.7 119 86.6
QL11p019153 Quercus lobata HOM05D005050 ORTHO05D006198 3.8e-47 191.8 127 81.9
FAN18G3347 Fragaria x ananassa HOM05D005050 ORTHO05D006198 8.4e-47 190.7 128 78.9
FAN13G0813 Fragaria x ananassa HOM05D005050 ORTHO05D006198 1.1e-46 190.3 128 78.9
Dinv19345 Davidia involucrata HOM05D005050 ORTHO05D006198 2.5e-46 189.1 132 78.0
ClCG05G009900 Citrullus lanatus HOM05D005050 ORTHO05D006198 5.5e-46 188.0 130 76.9
FAN08G2278 Fragaria x ananassa HOM05D005050 ORTHO05D006198 5.5e-46 188.0 128 77.3
FvH4_5g29810 Fragaria vesca HOM05D005050 ORTHO05D006198 9.3e-46 187.2 128 78.1
GSVIVG01029689001 Vitis vinifera HOM05D005050 ORTHO05D006198 1.2e-45 186.8 130 75.4
RcHm_v2.0_Chr7g0223331 Rosa chinensis HOM05D005050 ORTHO05D006198 2.1e-45 186.0 128 77.3
Ciclev10001338m.g Citrus clementina HOM05D005050 ORTHO05D006198 2.7e-45 185.7 125 80.0
MD08G1227300 Malus domestica HOM05D005050 ORTHO05D006198 3.5e-45 185.3 128 76.6
FAN04G2386 Fragaria x ananassa HOM05D005050 ORTHO05D006198 6.0e-45 184.5 128 77.3
MELO3C019500.2 Cucumis melo HOM05D005050 ORTHO05D006198 7.9e-45 184.1 130 75.4
Gorai.002G001300 Gossypium raimondii HOM05D005050 ORTHO05D006198 1.0e-44 183.7 131 78.6
CSS0001826 Camellia sinensis var. sinensis HOM05D005050 ORTHO05D006198 1.3e-44 183.3 131 76.3
CsaV3_3G018690 Cucumis sativus L. HOM05D005050 ORTHO05D006198 1.8e-44 183.0 130 74.6
MD15G1419700 Malus domestica HOM05D005050 ORTHO05D006198 1.8e-44 183.0 128 75.8
Prupe.1G564400 Prunus persica HOM05D005050 ORTHO05D006198 1.8e-44 183.0 125 76.8
Gohir.D01G000800 Gossypium hirsutum HOM05D005050 ORTHO05D006198 3.0e-44 182.2 131 77.9
Duzib052G0527 Durio zibethinus HOM05D005050 ORTHO05D006198 3.9e-44 181.8 137 76.6
Duzib132G0934 Durio zibethinus HOM05D005050 ORTHO05D006198 5.1e-44 181.4 131 76.3
Actinidia39062 Actinidia chinensis HOM05D005050 ORTHO05D006198 1.9e-43 179.5 128 75.8
Cpa.g.sc2.30 Carica papaya HOM05D005050 ORTHO05D006198 7.4e-43 177.6 129 76.7
vmacro01791 Vaccinium macrocarpon HOM05D005050 ORTHO05D006198 7.4e-43 177.6 120 77.5
Atru.chr6.1005 Acer truncatum HOM05D005050 ORTHO05D006198 1.3e-42 176.8 130 76.9
HanXRQChr03g0066561 Helianthus annuus HOM05D005050 ORTHO05D006198 3.7e-42 175.3 138 70.3
Manes.10G132900 Manihot esculenta HOM05D005050 ORTHO05D006198 4.8e-42 174.9 133 75.2
Gohir.A01G001100 Gossypium hirsutum HOM05D005050 ORTHO05D006198 6.3e-42 174.5 117 81.2
Hma1.2p1_0557F.1_g178260 Hydrangea macrophylla HOM05D005050 ORTHO05D006198 8.2e-42 174.1 133 73.7
Hma1.2p1_0557F.1_g178270 Hydrangea macrophylla HOM05D005050 ORTHO05D006198 8.2e-42 174.1 133 73.7
TAR628G0295 Trochodendron aralioides HOM05D005050 ORTHO05D006198 8.2e-42 174.1 138 71.0
DCAR_029238 Daucus carota HOM05D005050 ORTHO05D006198 1.1e-41 173.7 129 70.5
ECA240G2670 Erigeron canadensis HOM05D005050 ORTHO05D006198 1.1e-41 173.7 124 76.6
Sed0002635 Sechium edule HOM05D005050 ORTHO05D006198 1.8e-41 172.9 124 74.2
Sed0013576 Sechium edule HOM05D005050 ORTHO05D006198 2.4e-41 172.6 125 72.8
TWI23G0447 Tripterygium wilfordii HOM05D005050 ORTHO05D006198 2.4e-41 172.6 129 72.1
Cc02_g22180 Coffea canephora HOM05D005050 ORTHO05D006198 4.1e-41 171.8 129 72.9
Oeu026061.1 Olea europaea HOM05D005050 ORTHO05D006198 5.3e-41 171.4 128 71.9
TAR161G0004 Trochodendron aralioides HOM05D005050 ORTHO05D006198 1.2e-40 170.2 128 72.7
Eucgr.G00618 Eucalyptus grandis HOM05D005050 ORTHO05D006198 1.5e-40 169.9 130 71.5
CiPaw.06G149400 Carya illinoinensis HOM05D005050 ORTHO05D006198 2.0e-40 169.5 116 81.9
PGR042G1149 Punica granatum HOM05D005050 ORTHO05D006198 2.6e-40 169.1 119 77.3
TWI59G1202 Tripterygium wilfordii HOM05D005050 ORTHO05D006198 5.9e-40 167.9 132 71.2
Lj6g0001640 Lotus japonicus HOM05D005050 ORTHO05D006198 1.7e-39 166.4 129 75.2
CANSAT11G1507 Cannabis sativa HOM05D005050 ORTHO05D006198 2.2e-39 166.0 129 72.9
SalBow5G1811 Salvia bowleyana HOM05D005050 ORTHO05D006198 2.2e-39 166.0 130 71.5
MSTRG.16540 Avicennia marina HOM05D005050 ORTHO05D006198 3.8e-39 165.2 130 67.7
SalBow5G5549 Salvia bowleyana HOM05D005050 ORTHO05D006198 5.0e-39 164.9 130 70.8
arahy.Tifrunner.gnm1.ann1.HMQ04Z Arachis hypogaea HOM05D005050 ORTHO05D006198 6.5e-39 164.5 141 69.5
arahy.Tifrunner.gnm1.ann1.UX2R4L Arachis hypogaea HOM05D005050 ORTHO05D006198 6.5e-39 164.5 141 69.5
CANSAT25G2757 Cannabis sativa HOM05D005050 ORTHO05D006198 8.5e-39 164.1 139 68.3
Sabra01G0160800 Salix brachista HOM05D005050 ORTHO05D006198 3.2e-38 162.2 123 72.4
Medtr2g007800 Medicago truncatula HOM05D005050 ORTHO05D006198 5.5e-38 161.4 132 72.7
Rhsim11G0132400 Rhododendron simsii HOM05D005050 ORTHO05D006198 5.5e-38 161.4 119 74.8
Lalb_Chr12g0208631 Lupinus albus HOM05D005050 ORTHO05D006198 2.7e-37 159.1 127 74.8
Lj9A312G31 Lonicera japonica HOM05D005050 ORTHO05D006198 3.6e-37 158.7 130 70.8
Aqoxy5G02481 Aquilegia oxysepala HOM05D005050 ORTHO05D006198 7.9e-37 157.5 126 65.1
TWI14G0535 Tripterygium wilfordii HOM05D005050 ORTHO05D006198 1.8e-36 156.4 140 65.7
Lsat_1_v5_gn_9_116221 Lactuca sativa HOM05D005050 ORTHO05D006198 3.0e-36 155.6 130 69.2
MBI06_g01048_MAGBIO Magnolia biondii HOM05D005050 ORTHO05D006198 5.1e-36 154.8 125 69.6
Nn5g27962 Nelumbo nucifera HOM05D005050 ORTHO05D006198 6.7e-36 154.5 131 68.7
TPR.G2134 Trifolium pratense HOM05D005050 ORTHO05D006198 2.5e-35 152.5 131 70.2
AUR62025851 Chenopodium quinoa HOM05D005050 ORTHO05D006198 5.7e-35 151.4 122 68.9
Ah.10g032530 Amaranthus hybridus HOM05D005050 ORTHO05D006198 7.4e-35 151.0 129 68.2
VMungo0251G1671 Vigna mungo HOM05D005050 ORTHO05D006198 9.7e-35 150.6 129 70.5
Phvul.006G211700 Phaseolus vulgaris HOM05D005050 ORTHO05D006198 1.3e-34 150.2 129 69.8
Peaxi162Scf00011g00032 Petunia axillaris HOM05D005050 ORTHO05D006198 1.6e-34 149.8 136 65.4
AUR62029865 Chenopodium quinoa HOM05D005050 ORTHO05D006198 2.2e-34 149.4 122 68.9
AT1G15200 Arabidopsis thaliana HOM05D005050 ORTHO05D006198 4.8e-34 148.3 141 59.6
AL1G27280 Arabidopsis lyrata HOM05D005050 ORTHO05D006198 1.1e-33 147.1 112 70.5
EL10Ac2g03230 Beta vulgaris HOM05D005050 ORTHO05D006198 1.1e-33 147.1 115 71.3
Carub.0001s1495 Capsella rubella HOM05D005050 ORTHO05D006198 2.4e-33 146.0 132 60.6
arahy.Tifrunner.gnm1.ann1.X2Y1CG Arachis hypogaea HOM05D005050 ORTHO05D006198 5.3e-33 144.8 127 67.7
arahy.Tifrunner.gnm1.ann1.V19TN9 Arachis hypogaea HOM05D005050 ORTHO05D006198 9.1e-33 144.1 133 64.7
Hund13068 Selenicereus undatus HOM05D005050 ORTHO05D006198 4.5e-32 141.7 137 62.8
SGA_v2.0_scaffold1G00335 Striga asiatica HOM05D005050 ORTHO05D006198 7.7e-32 141.0 124 62.9
Nitab4.5_0003071g0060 Nicotiana tabacum HOM05D005050 ORTHO05D006198 2.9e-31 139.0 129 64.3
BcaB03g14552 Brassica carinata HOM05D005050 ORTHO05D006198 1.4e-30 136.7 115 62.6
Glyma.08G184100 Glycine max HOM05D005050 ORTHO05D006198 1.9e-30 136.3 127 66.9
BraA09t41526Z Brassica rapa HOM05D005050 ORTHO05D006198 4.2e-30 135.2 129 57.4
Nitab4.5_0009907g0040 Nicotiana tabacum HOM05D005050 ORTHO05D006198 4.2e-30 135.2 125 64.8
Solyc01g104560.3 Solanum lycopersicum HOM05D005050 ORTHO05D006198 4.2e-30 135.2 129 61.2
Migut.B00660 Erythranthe guttata HOM05D005050 ORTHO05D006198 1.6e-29 133.3 132 62.1
unitig_699.g19082 Utricularia gibba HOM05D005050 ORTHO05D006198 2.1e-29 132.9 118 63.6
BcaB02g06585 Brassica carinata HOM05D005050 ORTHO05D006198 2.7e-29 132.5 113 63.7
Sp1g13510 Schrenkiella parvula HOM05D005050 ORTHO05D006198 1.0e-28 130.6 131 58.8
CARHR015710 Cardamine hirsuta HOM05D005050 ORTHO05D006198 2.3e-28 129.4 132 57.6
A06p11180 Brassica napus HOM05D005050 ORTHO05D006198 3.9e-28 128.6 124 60.5
CDE12G0224 Ceratophyllum demersum HOM05D005050 ORTHO05D006198 8.8e-28 127.5 122 63.9
COL.COLO4_17901 Corchorus olitorius HOM05D005050 ORTHO05D006198 1.1e-27 127.1 73 89.0
HPP92_002179 Vanilla planifolia HOM05D005050 ORTHO05D006198 5.7e-27 124.8 122 59.8
HPP92_002226 Vanilla planifolia HOM05D005050 ORTHO05D006198 5.7e-27 124.8 122 59.8
C08p45110 Brassica napus HOM05D005050 ORTHO05D006198 9.7e-27 124.0 93 66.7
Thhalv10007720m.g Eutrema salsugineum HOM05D005050 ORTHO05D006198 6.3e-26 121.3 85 70.6
PGSC0003DMG400029778 Solanum tuberosum HOM05D005050 ORTHO05D006198 8.2e-26 120.9 129 58.1
unitig_27.g24936 Utricularia gibba HOM05D000188 ORTHO05D005820 1.1e-25 120.6 97 68.0
PSO170G5110 Papaver somniferum HOM05D005050 ORTHO05D006198 1.4e-25 120.2 109 64.2
Glyma.15G048700 Glycine max HOM05D005050 ORTHO05D006198 3.1e-25 119.0 73 83.6
PSO782G5384 Papaver somniferum HOM05D005050 ORTHO05D006198 4.1e-25 118.6 109 63.3
BcaC05g25448 Brassica carinata HOM05D005050 ORTHO05D006198 5.3e-25 118.2 100 63.0
C05p13300 Brassica napus HOM05D005050 ORTHO05D006198 5.3e-25 118.2 100 63.0
Aa31LG1G10 Aethionema arabicum HOM05D005050 ORTHO05D006198 2.6e-24 115.9 134 53.0
BcaB03g14555 Brassica carinata HOM05D005050 ORTHO05D006198 4.5e-24 115.2 104 62.5
CANSAT56G3350 Cannabis sativa HOM05D005050 ORTHO05D006198 4.5e-24 115.2 80 75.0
Oeu000199.1 Olea europaea HOM05D005050 ORTHO05D006198 5.9e-24 114.8 132 56.1
Sopen01g047070 Solanum pennellii HOM05D005050 ORTHO05D006198 2.2e-23 112.8 125 56.8
CANSAT35G1170 Cannabis sativa HOM05D005050 ORTHO05D006198 3.8e-23 112.1 80 73.8
BcaB03g14557 Brassica carinata HOM05D005050 ORTHO05D006198 5.5e-22 108.2 94 62.8
SHI16611 Sapria himalayana HOM05D005050 ORTHO05D006198 2.1e-21 106.3 102 57.8
Nn1g08554 Nelumbo nucifera HOM05D005050 ORTHO05D006198 4.7e-21 105.1 68 77.9
THA.LOC104805935 Tarenaya hassleriana HOM05D005050 ORTHO05D006198 6.1e-21 104.8 114 55.3
CAN.G1352.15 Capsicum annuum HOM05D005050 ORTHO05D006198 1.0e-20 104.0 116 56.9
Potri.003G021900 Populus trichocarpa HOM05D005050 ORTHO05D006198 2.3e-20 102.8 106 57.5
Zm00001eb216800 Zea mays HOM05D005050 ORTHO05D006198 1.1e-19 100.5 132 50.0
BcaNung05518 Brassica carinata HOM05D005050 ORTHO05D006198 8.2e-18 94.4 138 44.9
ATR0121G012 Amborella trichopoda HOM05D005050 ORTHO05D006198 7.7e-16 87.8 88 56.8
CDE01G0517 Ceratophyllum demersum HOM05D005050 ORTHO05D006198 2.9e-15 85.9 122 50.0
BolC8t52058H Brassica oleracea HOM05D005050 ORTHO05D006198 3.2e-06 55.8 39 64.1


User provided reference genes

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