Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01571 Corylus avellana HOM05D007103 ORTHO05D008948 5.6e-248 860.5 449 100.0
Cfa015108 Carpinus fangiana HOM05D007103 ORTHO05D008948 8.7e-241 836.6 452 96.9
QL03p041867 Quercus lobata HOM05D007103 ORTHO05D008948 1.1e-195 686.8 455 82.4
GSVIVG01010248001 Vitis vinifera HOM05D007103 ORTHO05D008948 5.7e-192 674.5 460 80.2
TWI74G0969 Tripterygium wilfordii HOM05D007103 ORTHO05D008948 1.6e-186 656.4 457 75.9
Manes.10G065901 Manihot esculenta HOM05D007103 ORTHO05D008948 6.1e-186 654.4 452 77.0
TAR371G1171 Trochodendron aralioides HOM05D007103 ORTHO05D008948 2.3e-180 636.0 456 75.0
Prupe.1G342500 Prunus persica HOM05D007103 ORTHO05D008948 1.1e-179 633.6 464 73.3
Dinv06214 Davidia involucrata HOM05D007103 ORTHO05D008948 3.4e-176 622.1 450 74.7
Sed0022925 Sechium edule HOM05D007103 ORTHO05D008948 3.4e-176 622.1 452 73.7
MELO3C005211.2 Cucumis melo HOM05D007103 ORTHO05D008948 1.3e-175 620.2 452 74.3
CsaV3_5G017430 Cucumis sativus L. HOM05D007103 ORTHO05D008948 5.4e-174 614.8 452 72.8
Thecc.02G296200 Theobroma cacao HOM05D007103 ORTHO05D008948 2.1e-170 602.8 455 72.7
CANSAT78G0644 Cannabis sativa HOM05D007103 ORTHO05D008948 2.3e-169 599.4 452 73.7
Glyma.05G135400 Glycine max HOM05D007103 ORTHO05D008948 8.9e-169 597.4 456 71.1
COL.COLO4_27515 Corchorus olitorius HOM05D007103 ORTHO05D008948 4.4e-168 595.1 451 70.5
Sabra08G0108900 Salix brachista HOM05D007103 ORTHO05D008948 1.3e-167 593.6 440 69.8
RcHm_v2.0_Chr4g0446051 Rosa chinensis HOM05D007103 ORTHO05D008948 2.4e-166 589.3 467 72.2
PGR044G1063 Punica granatum HOM05D007103 ORTHO05D008948 2.7e-165 585.9 453 71.7
Nn3g18722 Nelumbo nucifera HOM05D007103 ORTHO05D008948 1.7e-164 583.2 430 73.5
Eucgr.B02623 Eucalyptus grandis HOM05D007103 ORTHO05D008948 7.3e-163 577.8 458 71.4
Lj3A854G74 Lonicera japonica HOM05D007103 ORTHO05D008948 3.6e-162 575.5 476 67.9
CSS0049146 Camellia sinensis var. sinensis HOM05D007103 ORTHO05D008948 1.8e-161 573.2 441 69.2
Potri.008G143700 Populus trichocarpa HOM05D007103 ORTHO05D008948 3.1e-161 572.4 418 71.1
arahy.Tifrunner.gnm1.ann1.U7H2Z0 Arachis hypogaea HOM05D007103 ORTHO05D008948 4.0e-161 572.0 450 69.6
arahy.Tifrunner.gnm1.ann1.CDY64E Arachis hypogaea HOM05D007103 ORTHO05D008948 8.9e-161 570.9 450 69.3
Gohir.D01G137900 Gossypium hirsutum HOM05D007103 ORTHO05D008948 8.9e-161 570.9 455 69.7
Gohir.A01G145152 Gossypium hirsutum HOM05D007103 ORTHO05D008948 4.4e-160 568.5 455 69.2
Gorai.002G168100 Gossypium raimondii HOM05D007103 ORTHO05D008948 2.2e-159 566.2 455 69.2
THA.LOC104805941 Tarenaya hassleriana HOM05D007103 ORTHO05D008948 1.7e-156 556.6 454 68.9
MD13G1010500 Malus domestica HOM05D007103 ORTHO05D008948 2.3e-156 556.2 472 67.8
Ciclev10005118m.g Citrus clementina HOM05D007103 ORTHO05D008948 6.6e-156 554.7 393 77.9
Rhsim04G0168800 Rhododendron simsii HOM05D007103 ORTHO05D008948 2.8e-154 549.3 520 59.4
HanXRQChr14g0446891 Helianthus annuus HOM05D007103 ORTHO05D008948 6.2e-154 548.1 450 66.7
PSO478G2004 Papaver somniferum HOM05D007103 ORTHO05D008948 6.8e-153 544.7 458 66.6
CiPaw.05G161900 Carya illinoinensis HOM05D007103 ORTHO05D008948 3.4e-152 542.3 312 86.9
ATR0618G149 Amborella trichopoda HOM05D007103 ORTHO05D008948 7.6e-152 541.2 457 65.6
Lj4g0001083 Lotus japonicus HOM05D007103 ORTHO05D008948 1.4e-150 537.0 456 65.8
Ca_18212_v3 Cicer arietinum L. HOM05D007103 ORTHO05D008948 3.2e-150 535.8 452 65.7
MSTRG.2093 Avicennia marina HOM05D007103 ORTHO05D008948 7.3e-147 524.6 460 63.3
FAN17G1256 Fragaria x ananassa HOM05D007103 ORTHO05D008948 8.1e-146 521.2 474 65.2
Lalb_Chr13g0293061 Lupinus albus HOM05D007103 ORTHO05D008948 1.4e-145 520.4 453 64.0
PGSC0003DMG400031375 Solanum tuberosum HOM05D007103 ORTHO05D008948 2.4e-145 519.6 456 64.5
HPP92_022082 Vanilla planifolia HOM05D007103 ORTHO05D008948 2.4e-145 519.6 456 64.3
Solyc04g008560.3 Solanum lycopersicum HOM05D007103 ORTHO05D008948 3.1e-145 519.2 456 64.5
FAN07G2615 Fragaria x ananassa HOM05D007103 ORTHO05D008948 5.3e-145 518.5 473 64.5
Sopen04g003720 Solanum pennellii HOM05D007103 ORTHO05D008948 6.9e-145 518.1 456 64.5
FAN12G1264 Fragaria x ananassa HOM05D007103 ORTHO05D008948 3.4e-144 515.8 473 64.7
CDE08G0078 Ceratophyllum demersum HOM05D007103 ORTHO05D008948 9.9e-144 514.2 448 59.6
MBI06_g12320_MAGBIO Magnolia biondii HOM05D007103 ORTHO05D008948 1.7e-143 513.5 312 82.4
Psat7g086680 Pisum sativum HOM05D007103 ORTHO05D008948 2.4e-142 509.6 454 62.3
Nitab4.5_0000129g0430 Nicotiana tabacum HOM05D007103 ORTHO05D008948 1.0e-140 504.2 456 63.8
ClCG01G007020 Citrullus lanatus HOM05D007103 ORTHO05D008948 3.9e-140 502.3 336 74.4
Peaxi162Scf00329g00938 Petunia axillaris HOM05D007103 ORTHO05D008948 3.9e-140 502.3 454 63.7
Glyma.08G090600 Glycine max HOM05D007103 ORTHO05D008948 3.3e-139 499.2 389 68.4
CAN.G458.2 Capsicum annuum HOM05D007103 ORTHO05D008948 1.3e-138 497.3 399 66.7
Carub.0005s0121 Capsella rubella HOM05D007103 ORTHO05D008948 4.8e-138 495.4 465 61.7
AL5G11410 Arabidopsis lyrata HOM05D007103 ORTHO05D008948 1.4e-137 493.8 465 62.4
Nitab4.5_0007973g0020 Nicotiana tabacum HOM05D007103 ORTHO05D008948 1.4e-137 493.8 454 61.9
DCAR_030327 Daucus carota HOM05D007103 ORTHO05D008948 6.9e-137 491.5 456 59.4
Migut.E00576 Erythranthe guttata HOM05D007103 ORTHO05D008948 9.0e-137 491.1 484 57.0
SGA_v2.0_scaffold127G33990 Striga asiatica HOM05D007103 ORTHO05D008948 2.0e-136 490.0 456 60.5
TPR.G34765 Trifolium pratense HOM05D007103 ORTHO05D008948 8.4e-135 484.6 451 61.2
Sp2g13560 Schrenkiella parvula HOM05D007103 ORTHO05D008948 1.9e-134 483.4 469 61.4
Aa31LG2G7810 Aethionema arabicum HOM05D007103 ORTHO05D008948 4.2e-134 482.3 460 60.9
ECA246G2851 Erigeron canadensis HOM05D007103 ORTHO05D008948 1.9e-131 473.4 439 57.9
unitig_8.g4025 Utricularia gibba HOM05D007103 ORTHO05D008948 1.6e-130 470.3 452 58.2
AT2G02148 Arabidopsis thaliana HOM05D007103 ORTHO05D008948 3.7e-130 469.2 456 62.3
Lsat_1_v5_gn_3_27560 Lactuca sativa HOM05D007103 ORTHO05D008948 2.0e-128 463.4 452 60.4
BcaC04g21529 Brassica carinata HOM05D007103 ORTHO05D008948 2.6e-128 463.0 455 60.4
Aqoxy3G00022 Aquilegia oxysepala HOM05D007103 ORTHO05D008948 1.3e-127 460.7 493 56.8
C09p30690 Brassica napus HOM05D007103 ORTHO05D008948 1.3e-127 460.7 455 59.8
Phvul.002G186800 Phaseolus vulgaris HOM05D007103 ORTHO05D008948 2.2e-127 459.9 450 58.2
BraA09t37988Z Brassica rapa HOM05D007103 ORTHO05D008948 2.5e-126 456.4 455 58.9
Sc03g0005470 Simmondsia chinensis HOM05D007103 ORTHO05D008948 2.7e-125 453.0 455 56.9
BolC9t55934H Brassica oleracea HOM05D007103 ORTHO05D008948 3.5e-125 452.6 460 59.1
CARHR144820 Cardamine hirsuta HOM05D007103 ORTHO05D008948 4.6e-125 452.2 462 59.3
A09p23820 Brassica napus HOM05D007103 ORTHO05D008948 1.3e-124 450.7 459 58.6
BcaB07g30707 Brassica carinata HOM05D007103 ORTHO05D008948 1.9e-123 446.8 466 57.9
Thhalv10004194m.g Eutrema salsugineum HOM05D007103 ORTHO05D008948 3.3e-123 446.0 469 58.4
Actinidia32355 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.6e-122 443.7 330 70.3
AUR62003469 Chenopodium quinoa HOM05D007103 ORTHO05D008948 1.8e-121 440.3 420 57.1
vmacro08589 Vaccinium macrocarpon HOM05D007103 ORTHO05D008948 1.8e-121 440.3 343 67.6
Ciclev10010767m.g Citrus clementina HOM05D007103 ORTHO05D008948 6.0e-117 425.2 251 83.3
PSO017G4620 Papaver somniferum HOM05D007103 ORTHO05D008948 6.3e-114 415.2 378 60.8
EL10Ac6g15409 Beta vulgaris HOM05D007103 ORTHO05D008948 2.4e-113 413.3 518 47.9
FvH4_4g36300 Fragaria vesca HOM05D007103 ORTHO05D008948 3.1e-113 412.9 349 64.2
VMungo0251G2627 Vigna mungo HOM05D007103 ORTHO05D008948 6.5e-111 405.2 391 59.1
FAN22G0934 Fragaria x ananassa HOM05D007103 ORTHO05D008948 4.2e-110 402.5 414 54.8
AUR62017776 Chenopodium quinoa HOM05D007103 ORTHO05D008948 4.6e-109 399.1 410 54.4
Zm00001eb228800 Zea mays HOM05D007103 ORTHO05D008948 4.2e-102 375.9 392 54.1
Atru.chr11.1054 Acer truncatum HOM05D007103 ORTHO05D008948 4.7e-101 372.5 424 55.2
Mapoly0001s0015 Marchantia polymorpha HOM05D007103 ORTHO05D008948 3.1e-97 359.8 495 47.1
BcaB07g30709 Brassica carinata HOM05D007103 ORTHO05D008948 1.3e-95 354.4 437 51.3
SalBow2G1702 Salvia bowleyana HOM05D007103 ORTHO05D008948 7.4e-91 338.6 277 66.1
SEGI_34932 Sequoiadendron giganteum HOM05D007103 ORTHO05D008948 3.5e-88 329.7 312 56.4
Pp3c6_26300 Physcomitrium patens HOM05D007103 ORTHO05D008948 2.3e-84 317.0 483 44.9
Pp3c5_2140 Physcomitrium patens HOM05D007103 ORTHO05D008948 4.0e-84 316.2 480 45.0
SMO358G0481 Selaginella moellendorffii HOM05D007103 ORTHO05D008948 3.1e-81 306.6 455 41.8
Actinidia25204 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.0e-68 265.0 178 74.7
Cpa.g.sc2.105 Carica papaya HOM05D007103 ORTHO05D008948 1.0e-68 265.0 217 67.3
Actinidia31381 Actinidia chinensis HOM05D007103 ORTHO05D008948 1.5e-67 261.2 395 48.4
AagrBONN_evm.TU.Sc2ySwM_368.3256 Anthoceros agrestis HOM05D007103 ORTHO05D008948 7.8e-56 222.2 208 51.9
CBR_g70721 Chara braunii HOM05D007103 ORTHO05D008948 4.7e-53 213.0 204 49.0
Medtr5g010860 Medicago truncatula HOM05D007103 ORTHO05D008948 5.4e-49 199.5 197 57.9
Pp3c6_29570 Physcomitrium patens HOM05D007103 ORTHO05D008948 1.7e-39 167.9 185 49.7
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 2.7e-24 117.5 228 41.7
Hund18263 Selenicereus undatus HOM05D007103 ORTHO05D008948 3.0e-23 114.0 179 42.5
Aa31LG1G6410 Aethionema arabicum HOM05D007103 ORTHO05D008948 2.3e-15 87.8 103 50.5
Cpa.g.sc2.103 Carica papaya HOM05D007103 ORTHO05D008948 3.9e-15 87.0 73 60.3
Ciclev10006333m.g Citrus clementina HOM05D007103 ORTHO05D008948 8.7e-15 85.9 67 74.6
Medtr6g043130 Medicago truncatula HOM05D007103 ORTHO05D008948 1.8e-12 78.2 42 83.3
CAN.G166.15 Capsicum annuum HOM05D007103 ORTHO05D008948 3.8e-10 70.5 91 41.8


User provided reference genes

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