Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 5.5e-136 487.6 251 100.0
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 9.5e-120 433.7 248 86.3
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 1.6e-119 433.0 248 85.9
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 3.6e-119 431.8 248 85.9
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 3.1e-118 428.7 248 87.1
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 1.5e-117 426.4 248 84.7
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 1.7e-116 422.9 248 84.3
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 4.1e-115 418.3 243 86.0
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 5.4e-115 417.9 248 83.1
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 1.6e-114 416.4 248 81.9
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 2.1e-114 416.0 248 82.3
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 2.7e-114 415.6 247 83.8
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.7e-114 415.6 248 81.9
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 3.5e-114 415.2 248 81.9
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 6.0e-114 414.5 242 83.5
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.7e-113 412.9 243 83.1
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 3.9e-113 411.8 248 81.5
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 3.9e-113 411.8 248 81.0
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 6.6e-113 411.0 239 85.4
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 2.5e-112 409.1 242 82.6
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 3.3e-112 408.7 242 82.2
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 4.3e-112 408.3 246 82.9
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 7.3e-112 407.5 242 82.6
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 9.5e-112 407.1 242 81.4
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 1.2e-111 406.8 242 81.0
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 1.6e-111 406.4 243 82.7
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 2.1e-111 406.0 251 77.7
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 2.1e-111 406.0 251 77.3
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 2.8e-111 405.6 242 82.6
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 2.8e-111 405.6 242 82.2
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 3.6e-111 405.2 243 82.3
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 4.7e-111 404.8 248 78.6
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 4.7e-111 404.8 248 78.6
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 4.7e-111 404.8 248 78.6
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 8.1e-111 404.1 249 79.5
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 8.1e-111 404.1 249 79.9
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 1.1e-110 403.7 244 79.5
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 1.1e-110 403.7 244 79.5
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 1.4e-110 403.3 247 78.9
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 1.4e-110 403.3 248 77.4
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 2.3e-110 402.5 247 78.9
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 3.1e-110 402.1 242 81.4
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 5.2e-110 401.4 247 77.3
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 5.2e-110 401.4 248 77.8
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 5.2e-110 401.4 248 77.8
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 8.9e-110 400.6 248 77.8
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 2.0e-109 399.4 243 81.1
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 2.0e-109 399.4 242 80.6
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 9.9e-109 397.1 243 78.6
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 2.9e-108 395.6 246 78.9
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 3.7e-108 395.2 247 77.3
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 8.3e-108 394.0 242 78.9
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 1.1e-107 393.7 243 79.4
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 1.4e-107 393.3 247 77.7
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.9e-107 392.9 247 79.4
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 4.1e-107 391.7 243 78.2
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 5.4e-107 391.3 248 75.4
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 7.1e-107 391.0 246 76.8
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 1.2e-106 390.2 247 75.7
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 1.2e-106 390.2 243 78.2
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 3.5e-106 388.7 255 75.3
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 6.0e-106 387.9 250 78.0
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 5.1e-105 384.8 243 77.8
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 5.1e-105 384.8 243 79.8
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 6.6e-105 384.4 243 77.8
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 1.5e-104 383.3 248 77.0
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 5.6e-104 381.3 264 71.2
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 1.4e-102 376.7 245 75.5
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 2.4e-102 375.9 242 77.7
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 3.4e-101 372.1 247 72.9
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 7.6e-101 370.9 243 72.8
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 9.9e-101 370.5 243 74.1
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 1.1e-99 367.1 247 72.9
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 1.0e-97 360.5 234 75.2
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 3.0e-97 359.0 202 88.1
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 3.9e-97 358.6 202 89.6
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 6.6e-97 357.8 243 72.4
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 1.1e-96 357.1 239 70.3
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 2.5e-96 355.9 248 71.0
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 9.6e-96 354.0 243 71.2
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 2.0e-93 346.3 250 69.6
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 2.9e-92 342.4 202 82.7
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 8.4e-92 340.9 212 82.1
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.4e-91 340.1 244 69.7
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 1.9e-91 339.7 244 69.7
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 2.4e-91 339.3 243 67.1
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 3.2e-91 339.0 249 67.5
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 5.4e-91 338.2 217 77.4
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 7.1e-91 337.8 251 69.7
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 8.7e-89 330.9 184 90.2
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 3.6e-87 325.5 196 76.0
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 1.8e-86 323.2 243 64.2
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 2.0e-85 319.7 202 82.7
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 3.4e-85 318.9 251 66.5
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 1.3e-84 317.0 196 74.5
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 5.3e-78 295.0 267 64.4
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 9.3e-75 284.3 243 62.6
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 3.9e-73 278.9 242 60.7
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 3.7e-71 272.3 242 56.6
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 6.7e-65 251.5 242 49.6
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 6.7e-65 251.5 238 55.5
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 5.7e-64 248.4 158 74.7
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.4e-62 243.8 240 51.7
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 3.8e-60 235.7 202 63.9
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 4.2e-59 232.3 242 46.3
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 5.9e-53 211.8 152 69.1
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 6.5e-52 208.4 152 67.8
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 6.5e-52 208.4 158 66.5
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.9e-51 206.8 157 63.7
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 1.1e-48 197.6 114 85.1
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 7.4e-48 194.9 127 78.7
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 2.8e-47 193.0 159 60.4
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 1.2e-34 151.0 119 63.0
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 6.1e-34 148.7 95 73.7
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 3.0e-33 146.4 92 77.2
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 1.5e-32 144.1 89 77.5
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 2.6e-32 143.3 231 38.1
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 6.1e-18 95.5 171 41.5
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 8.9e-17 91.7 71 62.0
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 5.8e-08 62.4 39 66.7
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 3.7e-07 59.7 38 84.2


User provided reference genes

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