Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01510 Corylus avellana HOM05D003486 ORTHO05D004600 3.2e-73 278.5 156 100.0
Cfa015169 Carpinus fangiana HOM05D003486 ORTHO05D004600 1.9e-54 216.1 133 89.5
CiPaw.01G100300 Carya illinoinensis HOM05D003486 ORTHO05D004600 6.9e-52 207.6 135 84.4
QL10p048816 Quercus lobata HOM05D003486 ORTHO05D004600 3.8e-50 201.8 133 86.5
VMungo1127G0960 Vigna mungo HOM05D003486 ORTHO05D004600 1.8e-44 183.0 133 74.4
Ciclev10019579m.g Citrus clementina HOM05D003486 ORTHO05D004600 3.1e-44 182.2 112 81.2
Prupe.1G194100 Prunus persica HOM05D003486 ORTHO05D004600 2.0e-43 179.5 104 82.7
Phvul.011G054400 Phaseolus vulgaris HOM05D003486 ORTHO05D004600 7.6e-43 177.6 133 71.4
Lj3g0017553 Lotus japonicus HOM05D003486 ORTHO05D004600 4.9e-42 174.9 133 72.9
Gohir.A10G137350 Gossypium hirsutum HOM05D003486 ORTHO05D004600 8.4e-42 174.1 110 79.1
Manes.11G120800 Manihot esculenta HOM05D003486 ORTHO05D004600 1.1e-41 173.7 133 74.4
Gorai.011G142600 Gossypium raimondii HOM05D003486 ORTHO05D004600 1.4e-41 173.3 110 79.1
Atru.chr3.1489 Acer truncatum HOM05D003486 ORTHO05D004600 1.9e-41 172.9 133 78.2
Gohir.D10G129301 Gossypium hirsutum HOM05D003486 ORTHO05D004600 4.2e-41 171.8 110 78.2
Hma1.2p1_0847F.1_g227860 Hydrangea macrophylla HOM05D003486 ORTHO05D004600 5.5e-41 171.4 133 75.9
MD04G1040400 Malus domestica HOM05D003486 ORTHO05D004600 7.1e-41 171.0 104 78.8
Ca_20787_v3 Cicer arietinum L. HOM05D003486 ORTHO05D004600 9.3e-41 170.6 134 71.6
Duzib151G0706 Durio zibethinus HOM05D003486 ORTHO05D004600 1.6e-40 169.9 112 75.9
Sp5g03730 Schrenkiella parvula HOM05D003486 ORTHO05D004600 2.7e-40 169.1 133 66.2
RcHm_v2.0_Chr4g0406781 Rosa chinensis HOM05D003486 ORTHO05D004600 4.6e-40 168.3 104 79.8
CARHR169800 Cardamine hirsuta HOM05D003486 ORTHO05D004600 7.9e-40 167.5 134 64.2
arahy.Tifrunner.gnm1.ann1.Q0VLRE Arachis hypogaea HOM05D003486 ORTHO05D004600 1.0e-39 167.2 133 75.9
arahy.Tifrunner.gnm1.ann1.NQA14U Arachis hypogaea HOM05D003486 ORTHO05D004600 1.8e-39 166.4 133 75.2
Carub.0005s2615 Capsella rubella HOM05D003486 ORTHO05D004600 1.8e-39 166.4 133 63.9
Psat7g214880 Pisum sativum HOM05D003486 ORTHO05D004600 1.8e-39 166.4 134 68.7
Dinv44191 Davidia involucrata HOM05D003486 ORTHO05D004600 8.7e-39 164.1 133 71.4
Potri.007G128300 Populus trichocarpa HOM05D003486 ORTHO05D004600 8.7e-39 164.1 133 73.7
AL5G41310 Arabidopsis lyrata HOM05D003486 ORTHO05D004600 2.5e-38 162.5 107 71.0
PGR083G0732 Punica granatum HOM05D003486 ORTHO05D004600 7.4e-38 161.0 111 72.1
Sabra07G0104700 Salix brachista HOM05D003486 ORTHO05D004600 7.4e-38 161.0 133 71.4
AT3G59410 Arabidopsis thaliana HOM05D003486 ORTHO05D004600 9.7e-38 160.6 107 72.0
FAN07G1795 Fragaria x ananassa HOM05D003486 ORTHO05D004600 1.3e-37 160.2 104 76.0
THA.LOC104803678 Tarenaya hassleriana HOM05D003486 ORTHO05D004600 2.2e-37 159.5 107 69.2
Thhalv10005755m.g Eutrema salsugineum HOM05D003486 ORTHO05D004600 3.7e-37 158.7 105 71.4
CANSAT78G0197 Cannabis sativa HOM05D003486 ORTHO05D004600 4.8e-37 158.3 137 68.6
TPR.G34255 Trifolium pratense HOM05D003486 ORTHO05D004600 6.3e-37 157.9 112 68.8
Aa31LG10G13760 Aethionema arabicum HOM05D003486 ORTHO05D004600 1.1e-36 157.1 134 61.2
FvH4_4g10800 Fragaria vesca HOM05D003486 ORTHO05D004600 1.4e-36 156.8 104 76.0
BcaC07g40280 Brassica carinata HOM05D003486 ORTHO05D004600 1.8e-36 156.4 109 71.6
CSS0039550 Camellia sinensis var. sinensis HOM05D003486 ORTHO05D004600 1.8e-36 156.4 134 69.4
CAN.G336.8 Capsicum annuum HOM05D003486 ORTHO05D004600 1.2e-35 153.7 132 67.4
Sopen11g020460 Solanum pennellii HOM05D003486 ORTHO05D004600 1.2e-35 153.7 133 62.4
Rhsim02G0076900 Rhododendron simsii HOM05D003486 ORTHO05D004600 1.5e-35 153.3 133 69.2
GSVIVG01010755001 Vitis vinifera HOM05D003486 ORTHO05D004600 2.0e-35 152.9 136 69.1
A09p51690 Brassica napus HOM05D003486 ORTHO05D004600 4.5e-35 151.8 110 70.9
C08p34420 Brassica napus HOM05D003486 ORTHO05D004600 4.5e-35 151.8 110 70.9
BolC8t51043H Brassica oleracea HOM05D003486 ORTHO05D004600 4.5e-35 151.8 110 70.9
BraA09t40605Z Brassica rapa HOM05D003486 ORTHO05D004600 4.5e-35 151.8 110 70.9
Actinidia11303 Actinidia chinensis HOM05D003486 ORTHO05D004600 5.9e-35 151.4 103 75.7
EL10Ac3g05937 Beta vulgaris HOM05D003486 ORTHO05D004600 2.2e-34 149.4 110 65.5
Sc19g0002660 Simmondsia chinensis HOM05D003486 ORTHO05D004600 3.8e-34 148.7 112 67.9
DCAR_023939 Daucus carota HOM05D003486 ORTHO05D004600 6.5e-34 147.9 132 67.4
AUR62015385 Chenopodium quinoa HOM05D003486 ORTHO05D004600 3.2e-33 145.6 133 56.4
MELO3C011660.2 Cucumis melo HOM05D003486 ORTHO05D004600 3.2e-33 145.6 133 59.4
PSO017G7170 Papaver somniferum HOM05D003486 ORTHO05D004600 9.4e-33 144.1 113 64.6
PSO675G4708 Papaver somniferum HOM05D003486 ORTHO05D004600 9.4e-33 144.1 113 64.6
CsaV3_6G003940 Cucumis sativus L. HOM05D003486 ORTHO05D004600 1.6e-32 143.3 133 54.9
Sed0025407 Sechium edule HOM05D003486 ORTHO05D004600 1.6e-32 143.3 133 62.4
Medtr4g067160 Medicago truncatula HOM05D003486 ORTHO05D004600 4.6e-32 141.7 91 73.6
Oeu061594.1 Olea europaea HOM05D003486 ORTHO05D004600 4.6e-32 141.7 107 70.1
SalBow3G2610 Salvia bowleyana HOM05D003486 ORTHO05D004600 4.6e-32 141.7 102 70.6
Eucgr.L02279 Eucalyptus grandis HOM05D003486 ORTHO05D004600 6.1e-32 141.4 111 65.8
HPP92_023710 Vanilla planifolia HOM05D003486 ORTHO05D004600 2.3e-31 139.4 134 55.2
Lalb_Chr01g0003151 Lupinus albus HOM05D003486 ORTHO05D004600 3.9e-31 138.7 113 64.6
Lsat_1_v5_gn_3_115420 Lactuca sativa HOM05D003486 ORTHO05D004600 8.8e-31 137.5 133 58.6
Migut.G01067 Erythranthe guttata HOM05D003486 ORTHO05D004600 3.3e-30 135.6 106 64.2
ECA240G0242 Erigeron canadensis HOM05D003486 ORTHO05D004600 9.7e-30 134.0 102 68.6
Cc03_g12950 Coffea canephora HOM05D003486 ORTHO05D004600 2.2e-29 132.9 133 60.2
SGA_v2.0_scaffold17G08091 Striga asiatica HOM05D003486 ORTHO05D004600 2.8e-29 132.5 133 56.4
Nn1g09587 Nelumbo nucifera HOM05D003486 ORTHO05D004600 1.8e-28 129.8 112 61.6
HanXRQChr03g0091131 Helianthus annuus HOM05D003486 ORTHO05D004600 5.3e-28 128.3 133 56.4
Hund03158 Selenicereus undatus HOM05D003486 ORTHO05D004600 2.6e-27 125.9 168 46.4
Aqoxy2G04161 Aquilegia oxysepala HOM05D003486 ORTHO05D004600 5.9e-27 124.8 133 52.6
Lj6A53G34 Lonicera japonica HOM05D003486 ORTHO05D004600 1.4e-25 120.2 88 67.0
TWI15G0158 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.4e-25 120.2 133 60.9
TWI15G0580 Tripterygium wilfordii HOM05D003486 ORTHO05D004600 1.4e-25 120.2 133 60.9
Nitab4.5_0001940g0010 Nicotiana tabacum HOM05D003486 ORTHO05D004600 5.5e-25 118.2 80 72.5
Nitab4.5_0001263g0030 Nicotiana tabacum HOM05D003486 ORTHO05D004600 2.1e-24 116.3 84 67.9
CDE02G1871 Ceratophyllum demersum HOM05D003486 ORTHO05D004600 7.9e-24 114.4 112 52.7
BcaC07g40457 Brassica carinata HOM05D003486 ORTHO05D004600 1.5e-22 110.2 63 76.2
AUR62002305 Chenopodium quinoa HOM05D003486 ORTHO05D004600 2.0e-22 109.8 133 48.1
ATR0824G223 Amborella trichopoda HOM05D003486 ORTHO05D004600 1.1e-20 104.0 112 51.8
SEGI_39220 Sequoiadendron giganteum HOM05D003486 ORTHO05D004600 1.4e-20 103.6 91 58.2
Os04g0492500 Oryza sativa ssp. japonica HOM05D003486 ORTHO05D004600 3.5e-19 99.0 103 49.5
Thecc.04G179700 Theobroma cacao HOM05D003486 ORTHO05D004600 3.8e-18 95.5 51 84.3
Glyma.12G052400 Glycine max HOM05D003486 ORTHO05D004600 2.1e-16 89.7 51 78.4
Zm00001eb078800 Zea mays HOM05D003486 ORTHO05D004600 2.1e-16 89.7 56 67.9
Pp3c26_5370 Physcomitrium patens HOM05D003486 ORTHO05D004600 6.7e-15 84.7 111 43.2
Mapoly0088s0047 Marchantia polymorpha HOM05D003486 ORTHO05D004600 5.3e-12 75.1 111 38.7
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 5.9e-11 71.6 89 42.7
Ah.07g202020 Amaranthus hybridus HOM05D003486 ORTHO05D004600 8.5e-10 67.8 133 36.8
unitig_747.g21328 Utricularia gibba HOM05D003486 ORTHO05D004600 1.1e-09 67.4 106 34.9


User provided reference genes

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