Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01470 Corylus avellana HOM05D009134 ORTHO05D011284 4.2e-68 261.2 125 100.0
Cfa021324 Carpinus fangiana HOM05D009134 ORTHO05D011284 6.7e-58 227.3 125 85.6
QL10p050513 Quercus lobata HOM05D009134 ORTHO05D011284 3.3e-36 155.2 124 62.9
Thecc.04G176100 Theobroma cacao HOM05D009134 ORTHO05D011284 1.0e-26 123.6 125 49.6
CiPaw.01G097900 Carya illinoinensis HOM05D009134 ORTHO05D011284 2.0e-25 119.4 145 48.3
TPR.G34196 Trifolium pratense HOM05D009134 ORTHO05D011284 2.0e-25 119.4 134 50.0
Atru.chr4.1244 Acer truncatum HOM05D009134 ORTHO05D011284 7.5e-25 117.5 133 46.6
Manes.11G122300 Manihot esculenta HOM05D009134 ORTHO05D011284 3.5e-22 108.6 130 46.2
Lalb_Chr19g0138361 Lupinus albus HOM05D009134 ORTHO05D011284 3.9e-21 105.1 132 46.2
Medtr4g067330 Medicago truncatula HOM05D009134 ORTHO05D011284 5.0e-21 104.8 131 46.6
COL.COLO4_08224 Corchorus olitorius HOM05D009134 ORTHO05D011284 6.6e-21 104.4 111 48.6
TWI15G0033 Tripterygium wilfordii HOM05D009134 ORTHO05D011284 6.6e-21 104.4 99 49.5
Psat7g209480 Pisum sativum HOM05D009134 ORTHO05D011284 1.9e-20 102.8 132 43.9
Rhsim09G0024400 Rhododendron simsii HOM05D009134 ORTHO05D011284 2.1e-19 99.4 126 40.5
arahy.Tifrunner.gnm1.ann1.UEU2AI Arachis hypogaea HOM05D009134 ORTHO05D011284 2.8e-19 99.0 115 42.6
Potri.007G130200 Populus trichocarpa HOM05D009134 ORTHO05D011284 6.8e-18 94.4 98 48.0
Glyma.13G344800 Glycine max HOM05D009134 ORTHO05D011284 2.0e-17 92.8 126 46.8
vmacro00641 Vaccinium macrocarpon HOM05D009134 ORTHO05D011284 2.6e-17 92.4 125 41.6
Glyma.15G029500 Glycine max HOM05D000578 ORTHO05D000422 7.5e-17 90.9 126 45.2
MELO3C017681.2 Cucumis melo HOM05D009134 ORTHO05D011284 1.4e-15 86.7 92 47.8
CsaV3_4G003740 Cucumis sativus L. HOM05D009134 ORTHO05D011284 3.2e-15 85.5 92 47.8
Sed0000595 Sechium edule HOM05D009134 ORTHO05D011284 3.2e-15 85.5 99 44.4
CSS0032604 Camellia sinensis var. sinensis HOM05D009134 ORTHO05D011284 1.2e-14 83.6 88 47.7
VMungo1080G0302 Vigna mungo HOM05D009134 ORTHO05D011284 1.2e-14 83.6 127 42.5
ClCG07G016620 Citrullus lanatus HOM05D009134 ORTHO05D011284 2.1e-14 82.8 91 46.2
TAR365G1039 Trochodendron aralioides HOM05D009134 ORTHO05D011284 3.5e-14 82.0 94 47.9
Lj3g0025332 Lotus japonicus HOM05D000452 ORTHO05D000647 4.6e-14 81.6 130 38.5
TAR365G0166 Trochodendron aralioides HOM05D009134 ORTHO05D011284 4.6e-14 81.6 94 47.9
Eucgr.A00098 Eucalyptus grandis HOM05D009134 ORTHO05D011284 1.5e-12 76.6 113 41.6
PGR083G0717 Punica granatum HOM05D009134 ORTHO05D011284 2.5e-12 75.9 140 37.1
Nn1g09711 Nelumbo nucifera HOM05D009134 ORTHO05D011284 1.2e-11 73.6 78 51.3
arahy.Tifrunner.gnm1.ann1.9K6AGR Arachis hypogaea HOM05D009134 ORTHO05D011284 2.8e-11 72.4 137 35.8
Sabra07G0105900 Salix brachista HOM05D000578 ORTHO05D000422 6.8e-10 67.8 86 45.3
Nn7g37605 Nelumbo nucifera HOM05D009134 ORTHO05D011284 1.2e-09 67.0 104 40.4
Sc07g0007160 Simmondsia chinensis HOM05D009134 ORTHO05D011284 2.2e-08 62.8 112 34.8
Oeu034450.1 Olea europaea HOM05D009134 ORTHO05D011284 1.2e-06 57.0 90 42.2


User provided reference genes

Program Settings