Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01447 Corylus avellana HOM05D001295 ORTHO05D005319 2.0e-45 185.3 85 100.0
Cfa015203 Carpinus fangiana HOM05D001295 ORTHO05D005319 8.4e-36 153.3 72 93.1
CiPaw.01G095500 Carya illinoinensis HOM05D001295 ORTHO05D005319 3.5e-34 147.9 72 90.3
Atru.chr4.1272 Acer truncatum HOM05D001295 ORTHO05D005319 7.9e-34 146.7 72 86.1
Psat5g290520 Pisum sativum HOM05D001295 ORTHO05D005319 5.1e-33 144.1 72 83.3
CAN.G65.159 Capsicum annuum HOM05D001295 ORTHO05D005319 1.1e-32 142.9 72 86.1
Peaxi162Scf00180g00045 Petunia axillaris HOM05D001295 ORTHO05D005319 1.1e-32 142.9 72 83.3
CSS0006680 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 1.9e-32 142.1 72 81.9
CSS0045865 Camellia sinensis var. sinensis HOM05D001295 ORTHO05D005319 2.5e-32 141.7 72 80.6
VMungo1080G0958 Vigna mungo HOM05D001295 ORTHO05D005319 4.3e-32 141.0 72 84.7
Nitab4.5_0001586g0250 Nicotiana tabacum HOM05D001295 ORTHO05D005319 5.6e-32 140.6 72 81.9
TPR.G6512 Trifolium pratense HOM05D001295 ORTHO05D005319 5.6e-32 140.6 72 81.9
Lj3g0016601 Lotus japonicus HOM05D001295 ORTHO05D005319 9.6e-32 139.8 72 80.6
PGSC0003DMG400026920 Solanum tuberosum HOM05D001295 ORTHO05D005319 4.8e-31 137.5 72 81.9
Sed0017723 Sechium edule HOM05D001295 ORTHO05D005319 6.2e-31 137.1 72 77.8
DCAR_028425 Daucus carota HOM05D001295 ORTHO05D005319 1.4e-30 136.0 74 79.7
Solyc06g073130.4 Solanum lycopersicum HOM05D001295 ORTHO05D005319 1.8e-30 135.6 72 81.9
Sopen06g029480 Solanum pennellii HOM05D001295 ORTHO05D005319 1.8e-30 135.6 72 81.9
Glyma.15G028500 Glycine max HOM05D001295 ORTHO05D005319 2.4e-30 135.2 72 80.6
Medtr2g099125 Medicago truncatula HOM05D001295 ORTHO05D005319 2.4e-30 135.2 72 79.2
Oeu020777.1 Olea europaea HOM05D001295 ORTHO05D005319 3.1e-30 134.8 72 75.0
GSVIVG01004102001 Vitis vinifera HOM05D001295 ORTHO05D005319 3.1e-30 134.8 72 77.8
Nn1g09559 Nelumbo nucifera HOM05D001295 ORTHO05D005319 6.9e-30 133.7 72 77.8
Prupe.1G199500 Prunus persica HOM05D001295 ORTHO05D005319 1.2e-29 132.9 72 79.2
Cc03_g12290 Coffea canephora HOM05D001295 ORTHO05D005319 2.0e-29 132.1 72 80.6
Potri.007G132100 Populus trichocarpa HOM05D001295 ORTHO05D005319 2.6e-29 131.7 72 77.8
TAR633G1947 Trochodendron aralioides HOM05D001295 ORTHO05D005319 7.6e-29 130.2 72 76.4
AL4G42200 Arabidopsis lyrata HOM05D001295 ORTHO05D005319 9.9e-29 129.8 72 75.0
Thhalv10001762m.g Eutrema salsugineum HOM05D001295 ORTHO05D005319 2.2e-28 128.6 72 72.2
RhsimUnG0137700 Rhododendron simsii HOM05D001295 ORTHO05D005319 2.2e-28 128.6 72 75.0
COL.COLO4_09274 Corchorus olitorius HOM05D001295 ORTHO05D005319 3.8e-28 127.9 72 76.4
Nitab4.5_0002553g0060 Nicotiana tabacum HOM05D001295 ORTHO05D005319 4.9e-28 127.5 91 64.8
Manes.11G126000 Manihot esculenta HOM05D001295 ORTHO05D005319 6.4e-28 127.1 77 74.0
THA.LOC104803837 Tarenaya hassleriana HOM05D001295 ORTHO05D005319 6.4e-28 127.1 72 70.8
Carub.0004s2592 Capsella rubella HOM05D001295 ORTHO05D005319 1.1e-27 126.3 72 70.8
PGR142G2463 Punica granatum HOM05D001295 ORTHO05D005319 1.1e-27 126.3 72 77.8
BraA05t19365Z Brassica rapa HOM05D001295 ORTHO05D005319 1.4e-27 125.9 72 73.6
Thecc.04G173300 Theobroma cacao HOM05D001295 ORTHO05D005319 1.4e-27 125.9 72 73.6
EL10Ac3g06020 Beta vulgaris HOM05D001295 ORTHO05D005319 1.9e-27 125.6 72 73.6
PSO837G0039 Papaver somniferum HOM05D001295 ORTHO05D005319 4.2e-27 124.4 72 72.2
Lalb_Chr14g0372561 Lupinus albus HOM05D001295 ORTHO05D005319 5.5e-27 124.0 64 81.2
Rhsim09G0020700 Rhododendron simsii HOM05D001295 ORTHO05D005319 9.3e-27 123.2 84 64.3
HanXRQChr13g0419451 Helianthus annuus HOM05D001295 ORTHO05D005319 1.2e-26 122.9 72 72.2
Gorai.005G126300 Gossypium raimondii HOM05D001295 ORTHO05D005319 2.1e-26 122.1 72 75.0
MD04G1046100 Malus domestica HOM05D001295 ORTHO05D005319 2.1e-26 122.1 72 75.0
Lsat_1_v5_gn_3_110661 Lactuca sativa HOM05D001295 ORTHO05D005319 2.7e-26 121.7 72 68.1
Aa31LG1G25200 Aethionema arabicum HOM05D001295 ORTHO05D005319 7.9e-26 120.2 72 68.1
Gohir.A02G093300 Gossypium hirsutum HOM05D001295 ORTHO05D005319 1.3e-25 119.4 72 73.6
Gohir.D02G111400 Gossypium hirsutum HOM05D001295 ORTHO05D005319 3.0e-25 118.2 72 73.6
AUR62023829 Chenopodium quinoa HOM05D001295 ORTHO05D005319 5.1e-25 117.5 76 65.8
SalBow8G2942 Salvia bowleyana HOM05D001295 ORTHO05D005319 6.7e-25 117.1 72 66.7
Migut.G01307 Erythranthe guttata HOM05D001295 ORTHO05D005319 5.6e-24 114.0 72 63.9
ATR0743G262 Amborella trichopoda HOM05D001295 ORTHO05D005319 1.3e-23 112.8 68 67.6
Migut.G01326 Erythranthe guttata HOM05D001295 ORTHO05D005319 1.6e-23 112.5 72 63.9
Migut.G01305 Erythranthe guttata HOM05D001295 ORTHO05D005319 2.8e-23 111.7 70 64.3
AUR62002356 Chenopodium quinoa HOM05D001295 ORTHO05D005319 2.4e-22 108.6 95 52.6
unitig_37.g12026 Utricularia gibba HOM05D001295 ORTHO05D005319 3.1e-22 108.2 72 61.1
QL10p051312 Quercus lobata HOM05D001295 ORTHO05D005319 5.3e-22 107.5 55 81.8
HPP92_007597 Vanilla planifolia HOM05D001295 ORTHO05D005319 7.6e-21 103.6 68 60.3
Ca_01246_v3 Cicer arietinum L. HOM05D001295 ORTHO05D005319 6.5e-20 100.5 64 68.8
AagrBONN_evm.TU.Sc2ySwM_228.190 Anthoceros agrestis HOM05D001295 ORTHO05D005319 1.4e-19 99.4 69 58.0
ClCG06G001010 Citrullus lanatus HOM05D001295 ORTHO05D005319 1.4e-19 99.4 52 76.9
SMO337G0100 Selaginella moellendorffii HOM05D001295 ORTHO05D005319 3.2e-19 98.2 72 54.2
arahy.Tifrunner.gnm1.ann1.982DXJ Arachis hypogaea HOM05D001295 ORTHO05D005319 9.3e-19 96.7 52 78.8
arahy.Tifrunner.gnm1.ann1.CA0DYB Arachis hypogaea HOM05D001295 ORTHO05D005319 9.3e-19 96.7 52 78.8
arahy.Tifrunner.gnm1.ann1.1HI5HP Arachis hypogaea HOM05D001295 ORTHO05D005319 2.1e-18 95.5 52 78.8
Sabra07G0119100 Salix brachista HOM05D001295 ORTHO05D005319 4.6e-18 94.4 53 77.4
Sp4g25550 Schrenkiella parvula HOM05D001295 ORTHO05D005319 1.0e-17 93.2 52 71.2
MELO3C022439.2 Cucumis melo HOM05D001295 ORTHO05D005319 1.8e-17 92.4 60 65.0
vmacro00676 Vaccinium macrocarpon HOM05D001295 ORTHO05D005319 1.8e-17 92.4 52 73.1
BcaC02g12392 Brassica carinata HOM05D001295 ORTHO05D005319 1.1e-16 89.7 52 69.2
C04p04470 Brassica napus HOM05D001295 ORTHO05D005319 1.1e-16 89.7 52 69.2
BolC4t22080H Brassica oleracea HOM05D001295 ORTHO05D005319 1.1e-16 89.7 52 69.2
A05p03770 Brassica napus HOM05D001295 ORTHO05D005319 2.5e-16 88.6 52 71.2
BcaB02g08938 Brassica carinata HOM05D001295 ORTHO05D005319 4.3e-16 87.8 54 66.7
Hund12401 Selenicereus undatus HOM05D001295 ORTHO05D005319 2.2e-15 85.5 52 69.2
Duzib212G0222 Durio zibethinus HOM05D001295 ORTHO05D005319 1.4e-14 82.8 84 53.6
SGA_v2.0_scaffold12G06175 Striga asiatica HOM05D001295 ORTHO05D005319 1.4e-14 82.8 52 63.5
Mapoly0209s0009 Marchantia polymorpha HOM05D001295 ORTHO05D005319 3.1e-14 81.6 69 58.0
Sc21g0002910 Simmondsia chinensis HOM05D001295 ORTHO05D005319 2.2e-12 75.5 66 54.5
Medtr2g027210 Medicago truncatula HOM05D001295 ORTHO05D005319 9.1e-06 53.5 29 75.9


User provided reference genes

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