Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01434 Corylus avellana HOM05D001166 ORTHO05D000992 3.3e-86 321.6 159 100.0
Haze_01437 Corylus avellana HOM05D001166 ORTHO05D000992 2.3e-58 229.2 112 100.0
Cfa015205 Carpinus fangiana HOM05D001166 ORTHO05D000992 9.6e-25 117.5 63 92.1
CiPaw.01G095200 Carya illinoinensis HOM05D001166 ORTHO05D000992 1.8e-23 113.2 73 79.5
CiPaw.01G095300 Carya illinoinensis HOM05D001166 ORTHO05D000992 1.6e-19 100.1 62 79.0
RcHm_v2.0_Chr2g0125981 Rosa chinensis HOM05D001166 ORTHO05D000992 2.6e-14 82.8 77 67.5
Prupe.1G199800 Prunus persica HOM05D001166 ORTHO05D000992 2.2e-13 79.7 81 65.4
FvH4_6g25710 Fragaria vesca HOM05D001166 ORTHO05D000992 2.9e-13 79.3 77 62.3
FAN02G1113 Fragaria x ananassa HOM05D001166 ORTHO05D000992 2.9e-13 79.3 77 62.3
FAN09G4338 Fragaria x ananassa HOM05D001166 ORTHO05D000992 2.9e-13 79.3 77 62.3
FAN05G4094 Fragaria x ananassa HOM05D001166 ORTHO05D000992 6.4e-13 78.2 77 61.0
Nn7g37565 Nelumbo nucifera HOM05D001166 ORTHO05D000992 8.4e-13 77.8 71 62.0
QL10p051694 Quercus lobata HOM05D001166 ORTHO05D000992 1.1e-12 77.4 83 60.2
MD04G1046300 Malus domestica HOM05D001166 ORTHO05D000992 1.4e-12 77.0 81 64.2
MD13G1256700 Malus domestica HOM05D001166 ORTHO05D000992 1.4e-12 77.0 81 63.0
Sed0000827 Sechium edule HOM05D001166 ORTHO05D000992 2.1e-11 73.2 81 58.0
ClCG07G011690 Citrullus lanatus HOM05D001166 ORTHO05D000992 1.0e-10 70.9 81 58.0
MELO3C017793.2 Cucumis melo HOM05D001166 ORTHO05D000992 1.0e-10 70.9 81 58.0
CsaV3_4G002520 Cucumis sativus L. HOM05D001166 ORTHO05D000992 1.0e-10 70.9 81 58.0
CANSAT78G1110 Cannabis sativa HOM05D001166 ORTHO05D000992 1.3e-10 70.5 81 56.8
Gohir.A10G141000 Gossypium hirsutum HOM05D001166 ORTHO05D000992 1.3e-10 70.5 75 60.0
Gohir.D10G125900 Gossypium hirsutum HOM05D001166 ORTHO05D000992 1.3e-10 70.5 75 60.0
Gorai.011G138900 Gossypium raimondii HOM05D001166 ORTHO05D000992 1.3e-10 70.5 75 60.0
Thecc.04G172400 Theobroma cacao HOM05D001166 ORTHO05D000992 1.7e-10 70.1 76 57.9
Hund12399 Selenicereus undatus HOM05D001166 ORTHO05D000992 2.3e-10 69.7 68 61.8
EL10Ac3g06023 Beta vulgaris HOM05D001166 ORTHO05D000992 5.1e-10 68.6 74 55.4
Potri.017G023300 Populus trichocarpa HOM05D001166 ORTHO05D000992 1.9e-09 66.6 77 51.9
Nn1g09565 Nelumbo nucifera HOM05D001166 ORTHO05D000992 2.5e-09 66.2 78 52.6
Thecc.04G172700 Theobroma cacao HOM05D001166 ORTHO05D000992 3.3e-09 65.9 76 56.6
Duzib212G0869 Durio zibethinus HOM05D001166 ORTHO05D000992 4.3e-09 65.5 67 58.2
Glyma.13G346000 Glycine max HOM05D001166 ORTHO05D000992 4.3e-09 65.5 74 54.1
PGR142G2872 Punica granatum HOM05D001166 ORTHO05D000992 5.6e-09 65.1 76 57.9
arahy.Tifrunner.gnm1.ann1.X8XU5X Arachis hypogaea HOM05D001166 ORTHO05D000992 7.3e-09 64.7 75 56.0
AUR62023826 Chenopodium quinoa HOM05D001166 ORTHO05D000992 7.3e-09 64.7 75 50.7
Dinv44161 Davidia involucrata HOM05D001166 ORTHO05D000992 7.3e-09 64.7 87 46.0
Glyma.15G028300 Glycine max HOM05D001166 ORTHO05D000992 7.3e-09 64.7 73 54.8
Duzib151G0299 Durio zibethinus HOM05D001166 ORTHO05D000992 9.6e-09 64.3 69 55.1
Sed0024255 Sechium edule HOM05D001166 ORTHO05D000992 9.6e-09 64.3 73 54.8
arahy.Tifrunner.gnm1.ann1.WF9MFL Arachis hypogaea HOM05D001166 ORTHO05D000992 1.6e-08 63.5 75 54.7
COL.COLO4_06572 Corchorus olitorius HOM05D001166 ORTHO05D000992 1.6e-08 63.5 65 58.5
Manes.04G047900 Manihot esculenta HOM05D001166 ORTHO05D000992 1.6e-08 63.5 67 53.7
Phvul.005G154800 Phaseolus vulgaris HOM05D001166 ORTHO05D000992 1.6e-08 63.5 73 54.8
Potri.007G132700 Populus trichocarpa HOM05D001166 ORTHO05D000992 1.6e-08 63.5 76 52.6
VMungo1080G0792 Vigna mungo HOM05D001166 ORTHO05D000992 1.6e-08 63.5 73 54.8
Cpa.g.sc9.326 Carica papaya HOM05D001166 ORTHO05D000992 2.1e-08 63.2 67 58.2
Sabra17G0001900 Salix brachista HOM05D001166 ORTHO05D000992 2.1e-08 63.2 77 50.6
Sabra17G0014900 Salix brachista HOM05D001166 ORTHO05D000992 2.1e-08 63.2 77 50.6
TAR362G1296 Trochodendron aralioides HOM05D001166 ORTHO05D000992 2.8e-08 62.8 68 54.4
Sabra07G0107700 Salix brachista HOM05D001166 ORTHO05D000992 3.6e-08 62.4 66 59.1
Sabra07G0119500 Salix brachista HOM05D001166 ORTHO05D000992 3.6e-08 62.4 66 59.1
TPR.G18625 Trifolium pratense HOM05D001166 ORTHO05D000992 6.2e-08 61.6 79 50.6
Glyma.11G125700 Glycine max HOM05D001166 ORTHO05D000992 1.4e-07 60.5 66 51.5
TAR365G0651 Trochodendron aralioides HOM05D001166 ORTHO05D000992 1.4e-07 60.5 66 54.5
Ah.07g202420 Amaranthus hybridus HOM05D001166 ORTHO05D000992 1.8e-07 60.1 74 51.4
Hund03183 Selenicereus undatus HOM05D001166 ORTHO05D000992 1.8e-07 60.1 68 55.9
Lalb_Chr22g0352041 Lupinus albus HOM05D001166 ORTHO05D000992 2.4e-07 59.7 73 54.8
Glyma.12G050300 Glycine max HOM05D001166 ORTHO05D000992 3.1e-07 59.3 66 51.5
Lalb_Chr14g0372581 Lupinus albus HOM05D001166 ORTHO05D000992 3.1e-07 59.3 72 51.4
VMungo1127G1453 Vigna mungo HOM05D001166 ORTHO05D000992 3.1e-07 59.3 66 51.5
Lj3g0019971 Lotus japonicus HOM05D001166 ORTHO05D000992 4.0e-07 58.9 73 49.3
Actinidia11653 Actinidia chinensis HOM05D001166 ORTHO05D000992 6.9e-07 58.2 72 45.8
Phvul.011G052401 Phaseolus vulgaris HOM05D001166 ORTHO05D000992 6.9e-07 58.2 66 50.0
MBI07_g05953_MAGBIO Magnolia biondii HOM05D001166 ORTHO05D000992 9.0e-07 57.8 79 51.9
THA.LOC104802318 Tarenaya hassleriana HOM05D001166 ORTHO05D000992 9.0e-07 57.8 67 49.3
Atru.chr4.1288 Acer truncatum HOM05D001166 ORTHO05D000992 1.5e-06 57.0 64 56.2
Gohir.D09G206000 Gossypium hirsutum HOM05D001166 ORTHO05D000992 1.5e-06 57.0 80 50.0
Lalb_Chr24g0396711 Lupinus albus HOM05D001166 ORTHO05D000992 1.5e-06 57.0 62 56.5
Medtr2g099155 Medicago truncatula HOM05D001166 ORTHO05D000992 1.5e-06 57.0 72 50.0
Eucgr.G02017 Eucalyptus grandis HOM05D001166 ORTHO05D000992 2.0e-06 56.6 78 46.2
Ca_01243_v3 Cicer arietinum L. HOM05D001166 ORTHO05D000992 2.6e-06 56.2 80 48.8
Gorai.006G229900 Gossypium raimondii HOM05D001166 ORTHO05D000992 2.6e-06 56.2 71 52.1
TWI63G0212 Tripterygium wilfordii HOM05D001166 ORTHO05D000992 4.5e-06 55.5 66 48.5
Gohir.A09G212500 Gossypium hirsutum HOM05D001166 ORTHO05D000992 5.8e-06 55.1 71 50.7
Ciclev10021850m.g Citrus clementina HOM05D001166 ORTHO05D000992 7.6e-06 54.7 77 50.6
Sc25g0002610 Simmondsia chinensis HOM05D001166 ORTHO05D000992 9.9e-06 54.3 76 47.4


User provided reference genes

Program Settings