Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01428 Corylus avellana HOM05D001196 ORTHO05D005911 3.5e-72 275.0 136 100.0
Haze_01431 Corylus avellana HOM05D001196 ORTHO05D005911 3.5e-72 275.0 136 100.0
Cfa015208 Carpinus fangiana HOM05D001196 ORTHO05D005911 3.5e-64 248.4 176 75.6
CiPaw.01G095000 Carya illinoinensis HOM05D001196 ORTHO05D005911 6.6e-47 191.0 176 60.2
TAR362G0635 Trochodendron aralioides HOM05D001196 ORTHO05D005911 4.4e-43 178.3 175 56.6
Dinv05090 Davidia involucrata HOM05D001196 ORTHO05D005911 7.1e-41 171.0 180 55.6
GSVIVG01004096001 Vitis vinifera HOM05D001196 ORTHO05D005911 1.3e-39 166.8 173 56.1
CSS0044723 Camellia sinensis var. sinensis HOM05D001196 ORTHO05D005911 2.3e-39 166.0 176 50.6
Actinidia26499 Actinidia chinensis HOM05D001196 ORTHO05D005911 8.7e-39 164.1 176 51.7
Lj3C116T2 Lonicera japonica HOM05D001196 ORTHO05D005911 3.3e-38 162.2 155 55.5
Dinv44162 Davidia involucrata HOM05D001196 ORTHO05D005911 7.3e-38 161.0 182 52.2
ECA240G1795 Erigeron canadensis HOM05D001196 ORTHO05D005911 3.6e-37 158.7 172 50.6
Hma1.2p1_0487F.1_g163530 Hydrangea macrophylla HOM05D001196 ORTHO05D005911 8.1e-37 157.5 180 50.6
MD04G1046500 Malus domestica HOM05D001196 ORTHO05D005911 1.8e-36 156.4 174 51.1
Lj3C109T1 Lonicera japonica HOM05D001196 ORTHO05D005911 3.1e-36 155.6 176 49.4
Potri.007G132900 Populus trichocarpa HOM05D001196 ORTHO05D005911 2.6e-35 152.5 176 49.4
Lsat_1_v5_gn_3_111301 Lactuca sativa HOM05D001196 ORTHO05D005911 3.4e-35 152.1 141 56.7
Nn7g37564 Nelumbo nucifera HOM05D001196 ORTHO05D005911 7.6e-35 151.0 172 51.7
Prupe.1G200000 Prunus persica HOM05D001196 ORTHO05D005911 7.6e-35 151.0 164 54.3
Rhsim02G0082700 Rhododendron simsii HOM05D001196 ORTHO05D005911 9.9e-35 150.6 177 46.9
TWI15G0546 Tripterygium wilfordii HOM05D001196 ORTHO05D005911 8.4e-34 147.5 178 48.3
Sabra07G0107900 Salix brachista HOM05D001196 ORTHO05D005911 1.1e-33 147.1 190 46.3
Sabra07G0119700 Salix brachista HOM05D001196 ORTHO05D005911 1.1e-33 147.1 190 46.3
Potri.017G023200 Populus trichocarpa HOM05D001196 ORTHO05D005911 5.4e-33 144.8 177 47.5
Thecc.04G172200 Theobroma cacao HOM05D001196 ORTHO05D005911 5.4e-33 144.8 164 51.2
Solyc03g058470.3 Solanum lycopersicum HOM05D001196 ORTHO05D005911 1.2e-32 143.7 174 46.6
Sopen03g012120 Solanum pennellii HOM05D001196 ORTHO05D005911 1.2e-32 143.7 174 46.6
Nitab4.5_0006380g0010 Nicotiana tabacum HOM05D001196 ORTHO05D005911 2.1e-32 142.9 183 45.4
QL10p051768 Quercus lobata HOM05D001196 ORTHO05D005911 2.7e-32 142.5 109 65.1
HanXRQChr03g0089131 Helianthus annuus HOM05D001196 ORTHO05D005911 1.0e-31 140.6 169 46.2
Migut.G01291 Erythranthe guttata HOM05D001196 ORTHO05D005911 1.8e-31 139.8 174 44.8
Ciclev10018989m.g Citrus clementina HOM05D001196 ORTHO05D005911 5.1e-31 138.3 176 46.0
Peaxi162Scf00058g01216 Petunia axillaris HOM05D001196 ORTHO05D005911 2.5e-30 136.0 136 52.2
Sed0017758 Sechium edule HOM05D001196 ORTHO05D005911 3.3e-30 135.6 175 46.3
MELO3C017792.2 Cucumis melo HOM05D001196 ORTHO05D005911 5.6e-30 134.8 170 48.2
Duzib151G0336 Durio zibethinus HOM05D001196 ORTHO05D005911 7.4e-30 134.4 167 49.1
Lj3g0006119 Lotus japonicus HOM05D001196 ORTHO05D005911 7.4e-30 134.4 191 42.4
Actinidia34576 Actinidia chinensis HOM05D001196 ORTHO05D005911 2.1e-29 132.9 172 44.8
GSVIVG01004111001 Vitis vinifera HOM05D001196 ORTHO05D005911 4.8e-29 131.7 172 48.3
PSO017G4546 Papaver somniferum HOM05D001196 ORTHO05D005911 8.1e-29 131.0 180 44.4
Nn1g09558 Nelumbo nucifera HOM05D001196 ORTHO05D005911 1.1e-28 130.6 96 63.5
Gohir.A02G092901 Gossypium hirsutum HOM05D001196 ORTHO05D005911 1.8e-28 129.8 176 42.6
Gohir.D02G111200 Gossypium hirsutum HOM05D001196 ORTHO05D005911 6.9e-28 127.9 176 42.6
Manes.11G126700 Manihot esculenta HOM05D001196 ORTHO05D005911 1.5e-27 126.7 178 42.1
Nitab4.5_0000115g0020 Nicotiana tabacum HOM05D001196 ORTHO05D005911 1.5e-27 126.7 165 44.8
Gohir.A10G141100 Gossypium hirsutum HOM05D001196 ORTHO05D005911 4.5e-27 125.2 176 44.9
Phvul.005G155000 Phaseolus vulgaris HOM05D001196 ORTHO05D005911 5.8e-27 124.8 186 42.5
MSTRG.9746 Avicennia marina HOM05D001196 ORTHO05D005911 1.3e-26 123.6 175 42.9
Gorai.005G126100 Gossypium raimondii HOM05D001196 ORTHO05D005911 1.7e-26 123.2 164 43.9
EL10Ac3g06026 Beta vulgaris HOM05D001196 ORTHO05D005911 2.2e-26 122.9 168 43.5
Gohir.D10G125800 Gossypium hirsutum HOM05D001196 ORTHO05D005911 2.2e-26 122.9 176 44.9
Gorai.011G138800 Gossypium raimondii HOM05D001196 ORTHO05D005911 2.2e-26 122.9 176 44.9
Atru.chr4.1298 Acer truncatum HOM05D001196 ORTHO05D005911 2.9e-26 122.5 96 63.5
Cc03_g12480 Coffea canephora HOM05D001196 ORTHO05D005911 2.9e-26 122.5 239 33.5
SalBow2G0725 Salvia bowleyana HOM05D001196 ORTHO05D005911 8.4e-26 120.9 145 46.2
Eucgr.H00337 Eucalyptus grandis HOM05D001196 ORTHO05D005911 1.4e-25 120.2 165 42.4
MBI07_g05956_MAGBIO Magnolia biondii HOM05D001196 ORTHO05D005911 1.4e-25 120.2 164 47.0
Psat5g290800 Pisum sativum HOM05D001196 ORTHO05D005911 2.5e-25 119.4 185 40.5
Sc13g0007940 Simmondsia chinensis HOM05D001196 ORTHO05D005911 2.5e-25 119.4 165 45.5
unitig_52.g17673 Utricularia gibba HOM05D001196 ORTHO05D005911 5.5e-25 118.2 174 39.7
Glyma.13G346200 Glycine max HOM05D001196 ORTHO05D005911 7.1e-25 117.9 185 41.1
Ca_01241_v3 Cicer arietinum L. HOM05D001196 ORTHO05D005911 1.2e-24 117.1 186 41.4
TPR.G6502 Trifolium pratense HOM05D001196 ORTHO05D005911 6.0e-24 114.8 189 38.1
COL.COLO4_06574 Corchorus olitorius HOM05D001196 ORTHO05D005911 2.3e-23 112.8 100 55.0
Lalb_Chr14g0372601 Lupinus albus HOM05D001196 ORTHO05D005911 5.1e-23 111.7 187 41.2
CDE02G4724 Ceratophyllum demersum HOM05D001196 ORTHO05D005911 1.9e-22 109.8 176 38.1
Oeu015640.1 Olea europaea HOM05D001196 ORTHO05D005911 1.6e-21 106.7 98 52.0
CDE09G1175 Ceratophyllum demersum HOM05D001196 ORTHO05D005911 4.8e-21 105.1 164 39.0
CsaV3_4G002540 Cucumis sativus L. HOM05D001196 ORTHO05D005911 6.2e-21 104.8 95 57.9
CAN.G316.11 Capsicum annuum HOM05D001196 ORTHO05D005911 2.4e-20 102.8 91 53.8
Glyma.15G028000 Glycine max HOM05D001196 ORTHO05D005911 2.4e-20 102.8 109 49.5
PSO837G0034 Papaver somniferum HOM05D001196 ORTHO05D005911 2.4e-20 102.8 110 50.0
ATR0743G212 Amborella trichopoda HOM05D001196 ORTHO05D005911 6.9e-20 101.3 172 36.6
Os01g0100100 Oryza sativa ssp. japonica HOM05D001196 ORTHO05D005911 1.3e-18 97.1 167 37.1
HPP92_004649 Vanilla planifolia HOM05D001196 ORTHO05D005911 5.0e-18 95.1 190 35.3
AL5G41500 Arabidopsis lyrata HOM05D001196 ORTHO05D005911 6.5e-18 94.7 189 33.3
Lalb_Chr24g0396671 Lupinus albus HOM05D001196 ORTHO05D005911 1.1e-17 94.0 219 32.9
DCAR_029914 Daucus carota HOM05D001196 ORTHO05D005911 1.4e-17 93.6 98 46.9
Sp4g25580 Schrenkiella parvula HOM05D001196 ORTHO05D005911 1.4e-17 93.6 197 36.0
SGA_v2.0_scaffold283G46997 Striga asiatica HOM05D001196 ORTHO05D005911 1.4e-17 93.6 96 47.9
AT3G59570 Arabidopsis thaliana HOM05D001196 ORTHO05D005911 2.5e-17 92.8 184 34.2
THA.LOC104802319 Tarenaya hassleriana HOM05D001196 ORTHO05D005911 7.1e-17 91.3 197 35.0
AUR62002362 Chenopodium quinoa HOM05D001196 ORTHO05D005911 2.7e-16 89.4 99 48.5
AL4G42240 Arabidopsis lyrata HOM05D001196 ORTHO05D005911 3.5e-16 89.0 201 33.8
Aa31LG1G25230 Aethionema arabicum HOM05D001196 ORTHO05D005911 4.6e-16 88.6 189 32.8
Carub.0004s2595 Capsella rubella HOM05D001196 ORTHO05D005911 4.6e-16 88.6 196 34.2
AUR62023823 Chenopodium quinoa HOM05D001196 ORTHO05D005911 4.6e-16 88.6 99 47.5
VMungo1080G0844 Vigna mungo HOM05D001196 ORTHO05D005911 4.6e-16 88.6 109 44.0
Manes.04G048209 Manihot esculenta HOM05D001196 ORTHO05D005911 7.9e-16 87.8 95 50.5
Sp5g03580 Schrenkiella parvula HOM05D001196 ORTHO05D005911 1.3e-15 87.0 192 32.3
Thhalv10001327m.g Eutrema salsugineum HOM05D001196 ORTHO05D005911 1.8e-15 86.7 196 34.7
arahy.Tifrunner.gnm1.ann1.DI4MXM Arachis hypogaea HOM05D001196 ORTHO05D005911 2.3e-15 86.3 109 45.0
AT2G43490 Arabidopsis thaliana HOM05D001196 ORTHO05D005911 3.0e-15 85.9 201 33.3
BolC4t28549H Brassica oleracea HOM05D001196 ORTHO05D005911 5.1e-15 85.1 204 33.3
A04p32740 Brassica napus HOM05D001196 ORTHO05D005911 6.7e-15 84.7 204 33.3
BraA04t18738Z Brassica rapa HOM05D001196 ORTHO05D005911 6.7e-15 84.7 204 33.3
CARHR138580 Cardamine hirsuta HOM05D001196 ORTHO05D005911 8.7e-15 84.3 202 32.2
BcaB02g08936 Brassica carinata HOM05D001196 ORTHO05D005911 1.1e-14 84.0 193 34.2
BcaC02g07175 Brassica carinata HOM05D001196 ORTHO05D005911 1.1e-14 84.0 196 33.7
C04p70450 Brassica napus HOM05D001196 ORTHO05D005911 1.1e-14 84.0 196 33.7
SEGI_38230 Sequoiadendron giganteum HOM05D001196 ORTHO05D005911 1.5e-14 83.6 169 34.3
BcaB06g29316 Brassica carinata HOM05D001196 ORTHO05D005911 1.9e-14 83.2 199 32.2
BcaC07g40467 Brassica carinata HOM05D001196 ORTHO05D005911 1.9e-14 83.2 194 34.0
arahy.Tifrunner.gnm1.ann1.KT0MEF Arachis hypogaea HOM05D001196 ORTHO05D005911 2.5e-14 82.8 109 43.1
Medtr2g099185 Medicago truncatula HOM05D001196 ORTHO05D005911 4.3e-14 82.0 109 43.1
THA.LOC104805352 Tarenaya hassleriana HOM05D001196 ORTHO05D005911 5.7e-14 81.6 199 33.2
Zm00001eb127200 Zea mays HOM05D001196 ORTHO05D005911 5.7e-14 81.6 167 35.3
A05p03800 Brassica napus HOM05D001196 ORTHO05D005911 7.4e-14 81.3 204 32.8
BraA05t19368Z Brassica rapa HOM05D001196 ORTHO05D005911 7.4e-14 81.3 204 32.8
BcaC02g12388 Brassica carinata HOM05D001196 ORTHO05D005911 9.7e-14 80.9 208 31.7
A09p51840 Brassica napus HOM05D001196 ORTHO05D005911 1.6e-13 80.1 195 32.8
BcaB06g29318 Brassica carinata HOM05D001196 ORTHO05D005911 2.8e-13 79.3 129 39.5
C04p04500 Brassica napus HOM05D001196 ORTHO05D005911 2.8e-13 79.3 204 31.9
BolC4t22083H Brassica oleracea HOM05D001196 ORTHO05D005911 2.8e-13 79.3 204 31.9
C08p34560 Brassica napus HOM05D001196 ORTHO05D005911 3.7e-13 79.0 209 32.1
BcaC07g40484 Brassica carinata HOM05D001196 ORTHO05D005911 4.8e-13 78.6 210 31.9
BolC8t51058H Brassica oleracea HOM05D001196 ORTHO05D005911 4.8e-13 78.6 210 31.9
CARHR169960 Cardamine hirsuta HOM05D001196 ORTHO05D005911 4.8e-13 78.6 167 36.5
BraA09t40619Z Brassica rapa HOM05D001196 ORTHO05D005911 6.3e-13 78.2 195 32.3
BcaC07g40482 Brassica carinata HOM05D001196 ORTHO05D005911 3.8e-10 68.9 147 35.4
CSS0010815 Camellia sinensis var. sinensis HOM05D001196 ORTHO05D005911 6.5e-10 68.2 42 69.0
SMO146G0333 Selaginella moellendorffii HOM05D001196 ORTHO05D005911 9.4e-09 64.3 183 28.4
Oeu020783.1 Olea europaea HOM05D001196 ORTHO05D005911 5.1e-07 58.5 71 42.3


User provided reference genes

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