Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01410 Corylus avellana HOM05D007459 ORTHO05D009234 3.7e-91 338.2 171 100.0
Haze_01404 Corylus avellana HOM05D007459 ORTHO05D009234 1.1e-87 326.6 171 97.1
Cfa015229 Carpinus fangiana HOM05D007459 ORTHO05D009234 2.7e-86 322.0 171 95.9
Haze_01399 Corylus avellana HOM05D007459 ORTHO05D009234 1.7e-75 286.2 154 94.2
CiPaw.01G173000 Carya illinoinensis HOM05D007459 ORTHO05D009234 2.2e-67 259.2 174 75.3
QL10p052586 Quercus lobata HOM05D007459 ORTHO05D009234 1.7e-64 249.6 173 74.0
MD04G1047100 Malus domestica HOM05D007459 ORTHO05D009234 1.2e-60 236.9 171 71.3
Prupe.1G201700 Prunus persica HOM05D007459 ORTHO05D009234 1.9e-58 229.6 171 67.8
MELO3C017778.2 Cucumis melo HOM05D007459 ORTHO05D009234 5.4e-58 228.0 172 68.0
RcHm_v2.0_Chr2g0138101 Rosa chinensis HOM05D007459 ORTHO05D009234 1.0e-56 223.8 169 65.7
Sed0000488 Sechium edule HOM05D007459 ORTHO05D009234 3.9e-56 221.9 171 67.3
PGR142G0909 Punica granatum HOM05D007459 ORTHO05D009234 2.5e-55 219.2 178 66.3
Atru.chr4.1350 Acer truncatum HOM05D007459 ORTHO05D009234 5.6e-55 218.0 174 63.2
Thecc.04G171000 Theobroma cacao HOM05D007459 ORTHO05D009234 9.5e-55 217.2 176 63.6
Duzib151G0483 Durio zibethinus HOM05D007459 ORTHO05D009234 1.6e-54 216.5 175 65.7
Manes.04G050800 Manihot esculenta HOM05D007459 ORTHO05D009234 1.6e-54 216.5 172 65.1
CsaV3_4G002640 Cucumis sativus L. HOM05D007459 ORTHO05D009234 2.1e-54 216.1 165 67.3
CANSAT56G1213 Cannabis sativa HOM05D007459 ORTHO05D009234 2.8e-54 215.7 171 64.9
Thhalv10001662m.g Eutrema salsugineum HOM05D007459 ORTHO05D009234 3.1e-53 212.2 170 62.9
Ciclev10022478m.g Citrus clementina HOM05D007459 ORTHO05D009234 6.8e-53 211.1 183 61.7
FvH4_6g31340 Fragaria vesca HOM05D007459 ORTHO05D009234 3.4e-52 208.8 168 64.3
FAN14G2685 Fragaria x ananassa HOM05D007459 ORTHO05D009234 3.4e-52 208.8 168 64.3
AT2G43540 Arabidopsis thaliana HOM05D007459 ORTHO05D009234 2.2e-51 206.1 169 63.3
FAN05G5726 Fragaria x ananassa HOM05D007459 ORTHO05D009234 2.2e-51 206.1 168 63.1
CARHR138660 Cardamine hirsuta HOM05D007459 ORTHO05D009234 3.7e-51 205.3 170 61.8
CSS0017730 Camellia sinensis var. sinensis HOM05D007459 ORTHO05D009234 4.9e-51 204.9 174 63.2
C04p70510 Brassica napus HOM05D007459 ORTHO05D009234 6.4e-51 204.5 169 61.5
Lalb_Chr22g0352011 Lupinus albus HOM05D007459 ORTHO05D009234 8.3e-51 204.1 172 60.5
Gohir.A02G092500 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.1e-50 203.8 176 63.1
Gohir.D02G110600 Gossypium hirsutum HOM05D007459 ORTHO05D009234 1.1e-50 203.8 176 63.1
Hma1.2p1_2359F.1_g320593 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 1.4e-50 203.4 173 62.4
TAR362G1157 Trochodendron aralioides HOM05D007459 ORTHO05D009234 3.2e-50 202.2 174 63.2
THA.LOC104805901 Tarenaya hassleriana HOM05D007459 ORTHO05D009234 4.1e-50 201.8 175 63.4
Carub.0004s2600 Capsella rubella HOM05D007459 ORTHO05D009234 5.4e-50 201.4 174 60.9
Dinv44169 Davidia involucrata HOM05D007459 ORTHO05D009234 5.4e-50 201.4 173 63.6
Gorai.005G125500 Gossypium raimondii HOM05D007459 ORTHO05D009234 5.4e-50 201.4 176 62.5
Sp4g25650 Schrenkiella parvula HOM05D007459 ORTHO05D009234 5.4e-50 201.4 173 61.3
A04p32820 Brassica napus HOM05D007459 ORTHO05D009234 1.2e-49 200.3 169 62.1
BraA04t18744Z Brassica rapa HOM05D007459 ORTHO05D009234 1.2e-49 200.3 169 62.1
BcaC02g07169 Brassica carinata HOM05D007459 ORTHO05D009234 2.1e-49 199.5 169 62.1
BcaC02g07170 Brassica carinata HOM05D007459 ORTHO05D009234 2.1e-49 199.5 169 62.1
BolC4t28553H Brassica oleracea HOM05D007459 ORTHO05D009234 2.1e-49 199.5 169 62.1
AL4G42340 Arabidopsis lyrata HOM05D007459 ORTHO05D009234 2.7e-49 199.1 169 61.5
Hma1.2p1_0554F.1_g177940 Hydrangea macrophylla HOM05D007459 ORTHO05D009234 2.7e-49 199.1 173 61.3
BcaB06g29324 Brassica carinata HOM05D007459 ORTHO05D009234 4.6e-49 198.4 169 60.9
Aa31LG1G25280 Aethionema arabicum HOM05D007459 ORTHO05D009234 1.3e-48 196.8 168 60.1
COL.COLO4_28394 Corchorus olitorius HOM05D007459 ORTHO05D009234 3.9e-48 195.3 177 61.0
Sabra07G0109100 Salix brachista HOM05D007459 ORTHO05D009234 3.9e-48 195.3 176 57.4
Potri.007G134400 Populus trichocarpa HOM05D007459 ORTHO05D009234 5.1e-48 194.9 176 57.4
TWI38G0757 Tripterygium wilfordii HOM05D007459 ORTHO05D009234 2.1e-46 189.5 173 59.5
BolC4t28554H Brassica oleracea HOM05D007459 ORTHO05D009234 4.7e-46 188.3 158 60.8
C04p70520 Brassica napus HOM05D007459 ORTHO05D009234 8.1e-46 187.6 158 61.4
Lj6A129T18 Lonicera japonica HOM05D007459 ORTHO05D009234 4.0e-45 185.3 172 55.8
Lj3g0013618 Lotus japonicus HOM05D007459 ORTHO05D009234 8.9e-45 184.1 172 54.1
Ca_01236_v3 Cicer arietinum L. HOM05D007459 ORTHO05D009234 2.0e-44 183.0 172 55.8
Nn1g09730 Nelumbo nucifera HOM05D007459 ORTHO05D009234 2.6e-44 182.6 170 56.5
Cc03_g12180 Coffea canephora HOM05D007459 ORTHO05D009234 6.4e-43 177.9 178 52.8
Nitab4.5_0013525g0010 Nicotiana tabacum HOM05D007459 ORTHO05D009234 7.1e-42 174.5 173 54.3
Phvul.005G155700 Phaseolus vulgaris HOM05D007459 ORTHO05D009234 7.1e-42 174.5 167 53.3
TPR.G6565 Trifolium pratense HOM05D007459 ORTHO05D009234 7.1e-42 174.5 169 54.4
Nitab4.5_0002553g0080 Nicotiana tabacum HOM05D007459 ORTHO05D009234 1.2e-41 173.7 171 55.6
vmacro06567 Vaccinium macrocarpon HOM05D007459 ORTHO05D009234 2.1e-41 172.9 176 53.4
TPR.G13012 Trifolium pratense HOM05D007459 ORTHO05D009234 4.6e-41 171.8 171 53.8
Peaxi162Scf00180g00063 Petunia axillaris HOM05D007459 ORTHO05D009234 6.0e-41 171.4 169 52.1
Rhsim09G0013300 Rhododendron simsii HOM05D007459 ORTHO05D009234 6.0e-41 171.4 174 53.4
PGSC0003DMG400027018 Solanum tuberosum HOM05D007459 ORTHO05D009234 7.8e-41 171.0 170 54.1
SGA_v2.0_scaffold25G10994 Striga asiatica HOM05D007459 ORTHO05D009234 7.8e-41 171.0 170 54.7
Solyc06g073170.1 Solanum lycopersicum HOM05D007459 ORTHO05D009234 1.3e-40 170.2 170 54.7
HanXRQChr14g0433791 Helianthus annuus HOM05D007459 ORTHO05D009234 2.3e-40 169.5 171 53.8
Sopen06g029540 Solanum pennellii HOM05D007459 ORTHO05D009234 2.3e-40 169.5 170 54.7
Lsat_1_v5_gn_8_158021 Lactuca sativa HOM05D007459 ORTHO05D009234 3.9e-40 168.7 171 54.4
Glyma.13G346600 Glycine max HOM05D007459 ORTHO05D009234 5.1e-40 168.3 169 53.8
BcaC02g07168 Brassica carinata HOM05D007459 ORTHO05D009234 8.7e-40 167.5 144 59.0
Medtr2g099440 Medicago truncatula HOM05D007459 ORTHO05D009234 1.5e-39 166.8 171 51.5
Psat5g291760 Pisum sativum HOM05D007459 ORTHO05D009234 2.5e-39 166.0 171 53.8
Migut.N03078 Erythranthe guttata HOM05D007459 ORTHO05D009234 4.8e-38 161.8 170 53.5
MBI11_g23942_MAGBIO Magnolia biondii HOM05D004197 ORTHO05D004975 6.9e-37 157.9 161 54.7
ClCG07G015090 Citrullus lanatus HOM05D007459 ORTHO05D009234 1.5e-36 156.8 171 53.2
Sc06g0007410 Simmondsia chinensis HOM05D007459 ORTHO05D009234 1.5e-36 156.8 169 48.5
unitig_85.g27223 Utricularia gibba HOM05D007459 ORTHO05D009234 7.6e-36 154.5 172 50.0
DCAR_028411 Daucus carota HOM05D007459 ORTHO05D009234 2.1e-33 146.4 167 50.3
Eucgr.L02147 Eucalyptus grandis HOM05D007459 ORTHO05D009234 4.6e-33 145.2 149 52.3
Os04g0495300 Oryza sativa ssp. japonica HOM05D007459 ORTHO05D009234 1.3e-32 143.7 168 47.0
EL10Ac3g06032 Beta vulgaris HOM05D007459 ORTHO05D009234 6.6e-32 141.4 169 47.9
ATR0743G068 Amborella trichopoda HOM05D007459 ORTHO05D009234 4.3e-31 138.7 171 48.0
Duzib151G0582 Durio zibethinus HOM05D007459 ORTHO05D009234 9.6e-31 137.5 122 56.6
AUR62002368 Chenopodium quinoa HOM05D007459 ORTHO05D009234 1.3e-30 137.1 169 45.0
Zm00001eb078650 Zea mays HOM05D007459 ORTHO05D009234 1.4e-29 133.7 168 49.4
HPP92_004524 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.8e-29 133.3 168 46.4
Actinidia27099 Actinidia chinensis HOM05D007459 ORTHO05D009234 4.0e-29 132.1 143 49.7
AUR62023818 Chenopodium quinoa HOM05D007459 ORTHO05D009234 4.0e-29 132.1 169 45.0
CDE09G0571 Ceratophyllum demersum HOM05D004197 ORTHO05D004975 7.6e-28 127.9 140 47.9
Ah.07g202500 Amaranthus hybridus HOM05D007459 ORTHO05D009234 2.1e-25 119.8 169 44.4
HPP92_004533 Vanilla planifolia HOM05D007459 ORTHO05D009234 1.0e-19 100.9 131 45.0
EL10Ac9g22812 Beta vulgaris HOM05D007459 ORTHO05D009234 3.8e-19 99.0 151 41.1
EL10Ac4g10228 Beta vulgaris HOM05D007459 ORTHO05D009234 1.6e-17 93.6 138 37.0
EL10Ac5g11171 Beta vulgaris HOM05D007459 ORTHO05D009234 1.0e-16 90.9 142 40.1
Pp3c17_9330 Physcomitrium patens HOM05D007459 ORTHO05D009234 7.6e-12 74.7 142 34.5
EL10Ac6g13927 Beta vulgaris HOM05D000045 ORTHO05D010054 5.0e-11 72.0 89 46.1
SEGI_40343 Sequoiadendron giganteum HOM05D007459 ORTHO05D009234 5.0e-11 72.0 133 34.6
Mapoly0038s0008 Marchantia polymorpha HOM05D007459 ORTHO05D009234 7.1e-10 68.2 159 29.6
ECA238G4467 Erigeron canadensis HOM05D007459 ORTHO05D009234 1.8e-08 63.5 75 46.7
EL10Ac3g06136 Beta vulgaris HOM05D007459 ORTHO05D009234 6.7e-08 61.6 75 44.0
Pp3c3_12780 Physcomitrium patens HOM05D007459 ORTHO05D009234 6.7e-08 61.6 182 26.9


User provided reference genes

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