Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01407 Corylus avellana HOM05D003590 ORTHO05D004290 2.2e-169 599.0 321 100.0
Cfa015230 Carpinus fangiana HOM05D003590 ORTHO05D004290 7.6e-122 441.0 321 80.4
CiPaw.01G172800 Carya illinoinensis HOM05D003590 ORTHO05D004290 2.8e-116 422.5 322 76.7
CiPaw.02G102900 Carya illinoinensis HOM05D003590 ORTHO05D004290 2.6e-114 416.0 322 75.5
COL.COLO4_10136 Corchorus olitorius HOM05D003590 ORTHO05D004290 6.7e-110 401.4 322 72.0
MD00G1019200 Malus domestica HOM05D003590 ORTHO05D004290 1.5e-109 400.2 321 72.0
Prupe.1G203200 Prunus persica HOM05D003590 ORTHO05D004290 1.5e-109 400.2 322 72.7
Glyma.12G049400 Glycine max HOM05D003590 ORTHO05D004290 4.3e-109 398.7 321 72.0
CANSAT64G0301 Cannabis sativa HOM05D003590 ORTHO05D004290 9.7e-109 397.5 322 72.4
Duzib268G1650 Durio zibethinus HOM05D003590 ORTHO05D004290 9.7e-109 397.5 322 71.4
Glyma.11G124800 Glycine max HOM05D003590 ORTHO05D004290 1.3e-108 397.1 321 71.7
GSVIVG01019065001 Vitis vinifera HOM05D003590 ORTHO05D004290 1.3e-108 397.1 321 72.0
Duzib151G0409 Durio zibethinus HOM05D003590 ORTHO05D004290 2.2e-108 396.4 321 70.4
RcHm_v2.0_Chr6g0285711 Rosa chinensis HOM05D003590 ORTHO05D004290 3.7e-108 395.6 322 71.1
Lj3g0023284 Lotus japonicus HOM05D003590 ORTHO05D004290 1.4e-107 393.7 321 71.7
FvH4_2g19990 Fragaria vesca HOM05D003590 ORTHO05D004290 2.4e-107 392.9 322 70.5
Dinv33190 Davidia involucrata HOM05D003590 ORTHO05D004290 3.1e-107 392.5 322 71.4
Dinv15385 Davidia involucrata HOM05D003590 ORTHO05D004290 5.3e-107 391.7 322 70.2
Thecc.04G169500 Theobroma cacao HOM05D003590 ORTHO05D004290 5.3e-107 391.7 322 70.2
ClCG07G015120 Citrullus lanatus HOM05D003590 ORTHO05D004290 1.2e-106 390.6 321 70.7
Phvul.008G099200 Phaseolus vulgaris HOM05D003590 ORTHO05D004290 1.2e-106 390.6 321 71.3
Ca_20810_v3 Cicer arietinum L. HOM05D003590 ORTHO05D004290 2.0e-106 389.8 321 71.3
Sed0008844 Sechium edule HOM05D003590 ORTHO05D004290 2.0e-106 389.8 321 71.3
VMungo1383G1305 Vigna mungo HOM05D003590 ORTHO05D004290 2.0e-106 389.8 321 71.0
Sed0014148 Sechium edule HOM05D003590 ORTHO05D004290 3.4e-106 389.0 321 70.7
RcHm_v2.0_Chr2g0122441 Rosa chinensis HOM05D003590 ORTHO05D004290 7.7e-106 387.9 321 69.5
TAR362G0082 Trochodendron aralioides HOM05D003590 ORTHO05D004290 1.0e-105 387.5 322 70.8
Ciclev10021047m.g Citrus clementina HOM05D003590 ORTHO05D004290 1.3e-105 387.1 322 71.1
arahy.Tifrunner.gnm1.ann1.SY3MF3 Arachis hypogaea HOM05D003590 ORTHO05D004290 2.9e-105 386.0 322 70.8
MELO3C017774.2 Cucumis melo HOM05D003590 ORTHO05D004290 3.8e-105 385.6 321 70.1
Dinv29086 Davidia involucrata HOM05D003590 ORTHO05D004290 5.0e-105 385.2 322 69.6
arahy.Tifrunner.gnm1.ann1.YL8857 Arachis hypogaea HOM05D003590 ORTHO05D004290 6.5e-105 384.8 322 70.5
CsaV3_4G002670 Cucumis sativus L. HOM05D003590 ORTHO05D004290 8.5e-105 384.4 321 70.1
Potri.006G123600 Populus trichocarpa HOM05D003590 ORTHO05D004290 8.5e-105 384.4 321 69.5
TWI36G1101 Tripterygium wilfordii HOM05D003590 ORTHO05D004290 8.5e-105 384.4 322 69.6
CSS0039108 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 1.9e-104 383.3 322 68.9
Gohir.A10G141800 Gossypium hirsutum HOM05D003590 ORTHO05D004290 2.5e-104 382.9 322 68.6
Lalb_Chr19g0138461 Lupinus albus HOM05D003590 ORTHO05D004290 2.5e-104 382.9 321 69.8
MBI17_g21475_MAGBIO Magnolia biondii HOM05D003590 ORTHO05D004290 2.5e-104 382.9 322 69.9
MD17G1177400 Malus domestica HOM05D003590 ORTHO05D004290 2.5e-104 382.9 359 64.1
Atru.chr4.1363 Acer truncatum HOM05D003590 ORTHO05D004290 3.2e-104 382.5 321 70.4
Actinidia27105 Actinidia chinensis HOM05D003590 ORTHO05D004290 3.2e-104 382.5 322 70.5
Gohir.D02G109000 Gossypium hirsutum HOM05D003590 ORTHO05D004290 3.2e-104 382.5 321 69.8
Gorai.005G124600 Gossypium raimondii HOM05D003590 ORTHO05D004290 3.2e-104 382.5 321 69.8
Rhsim09G0012200 Rhododendron simsii HOM05D003590 ORTHO05D004290 3.2e-104 382.5 324 70.4
Medtr4g068210 Medicago truncatula HOM05D003590 ORTHO05D004290 4.2e-104 382.1 321 70.1
Gohir.A02G091600 Gossypium hirsutum HOM05D003590 ORTHO05D004290 7.2e-104 381.3 321 69.8
Gohir.D10G124700 Gossypium hirsutum HOM05D003590 ORTHO05D004290 7.2e-104 381.3 322 68.3
Gorai.011G137800 Gossypium raimondii HOM05D003590 ORTHO05D004290 7.2e-104 381.3 322 68.3
CDE08G0825 Ceratophyllum demersum HOM05D003590 ORTHO05D004290 1.2e-103 380.6 322 69.9
Eucgr.K00001 Eucalyptus grandis HOM05D003590 ORTHO05D004290 1.6e-103 380.2 321 67.3
Eucgr.A00018 Eucalyptus grandis HOM05D003590 ORTHO05D004290 3.6e-103 379.0 321 69.8
Cc09_g03870 Coffea canephora HOM05D003590 ORTHO05D004290 4.6e-103 378.6 323 69.0
Nn7g37627 Nelumbo nucifera HOM05D003590 ORTHO05D004290 4.6e-103 378.6 322 69.6
Potri.016G099400 Populus trichocarpa HOM05D003590 ORTHO05D004290 4.6e-103 378.6 322 69.9
PGR119G1440 Punica granatum HOM05D003590 ORTHO05D004290 4.6e-103 378.6 321 67.9
Duzib212G0521 Durio zibethinus HOM05D003590 ORTHO05D004290 1.0e-102 377.5 322 68.0
FAN27G0950 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.4e-102 377.1 350 64.6
Lalb_Chr07g0192831 Lupinus albus HOM05D003590 ORTHO05D004290 1.8e-102 376.7 321 68.5
Eucgr.B01427 Eucalyptus grandis HOM05D003590 ORTHO05D004290 3.0e-102 375.9 321 66.4
TPR.G34214 Trifolium pratense HOM05D003590 ORTHO05D004290 5.1e-102 375.2 322 68.9
vmacro00650 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 5.1e-102 375.2 322 69.3
vmacro00679 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 5.1e-102 375.2 322 69.3
Manes.11G128000 Manihot esculenta HOM05D003590 ORTHO05D004290 6.7e-102 374.8 321 68.2
GSVIVG01038103001 Vitis vinifera HOM05D003590 ORTHO05D004290 6.7e-102 374.8 320 68.4
DCAR_023942 Daucus carota HOM05D003590 ORTHO05D004290 8.8e-102 374.4 320 69.4
FAN15G3511 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.1e-101 374.0 360 63.1
FAN24G1875 Fragaria x ananassa HOM05D003590 ORTHO05D004290 2.0e-101 373.2 362 62.7
Lj3A152T20 Lonicera japonica HOM05D003590 ORTHO05D004290 2.0e-101 373.2 321 67.9
Sc06g0005010 Simmondsia chinensis HOM05D003590 ORTHO05D004290 2.5e-101 372.9 322 68.0
MSTRG.8205 Avicennia marina HOM05D003590 ORTHO05D004290 5.7e-101 371.7 321 68.5
MBI07_g22611_MAGBIO Magnolia biondii HOM05D003590 ORTHO05D004290 1.7e-100 370.2 322 67.7
ATR0743G202 Amborella trichopoda HOM05D003590 ORTHO05D004290 6.3e-100 368.2 322 67.4
Aqoxy2G04149 Aquilegia oxysepala HOM05D003590 ORTHO05D004290 6.3e-100 368.2 322 66.1
SalBow6G6444 Salvia bowleyana HOM05D003590 ORTHO05D004290 6.3e-100 368.2 321 68.5
Solyc11g008990.2 Solanum lycopersicum HOM05D003590 ORTHO05D004290 6.3e-100 368.2 322 67.1
Sopen11g004770 Solanum pennellii HOM05D003590 ORTHO05D004290 6.3e-100 368.2 322 67.1
PGSC0003DMG400016231 Solanum tuberosum HOM05D003590 ORTHO05D004290 6.3e-100 368.2 322 67.1
Os01g0895100 Oryza sativa ssp. japonica HOM05D003590 ORTHO05D004290 8.2e-100 367.9 321 67.9
PGR042G3827 Punica granatum HOM05D003590 ORTHO05D004290 1.1e-99 367.5 321 67.3
CAN.G1177.3 Capsicum annuum HOM05D003590 ORTHO05D004290 1.4e-99 367.1 322 67.1
PSO339G4307 Papaver somniferum HOM05D003590 ORTHO05D004290 1.8e-99 366.7 321 67.0
Lsat_1_v5_gn_8_26121 Lactuca sativa HOM05D003590 ORTHO05D004290 2.4e-99 366.3 323 65.9
Manes.04G049785 Manihot esculenta HOM05D003590 ORTHO05D004290 2.4e-99 366.3 321 67.6
Oeu064494.2 Olea europaea HOM05D003590 ORTHO05D004290 2.4e-99 366.3 322 67.7
Peaxi162Scf00074g01833 Petunia axillaris HOM05D003590 ORTHO05D004290 2.4e-99 366.3 322 67.4
Nitab4.5_0004390g0060 Nicotiana tabacum HOM05D003590 ORTHO05D004290 4.1e-99 365.5 322 67.1
PSO384G2196 Papaver somniferum HOM05D003590 ORTHO05D004290 9.1e-99 364.4 321 66.4
Zm00001eb144840 Zea mays HOM05D003590 ORTHO05D004290 1.2e-98 364.0 321 67.6
FAN26G3423 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.5e-98 363.6 334 65.0
HanXRQChr16g0500391 Helianthus annuus HOM05D003590 ORTHO05D004290 4.5e-98 362.1 320 66.2
Actinidia03270 Actinidia chinensis HOM05D003590 ORTHO05D004290 7.7e-98 361.3 322 67.7
CANSAT54G1837 Cannabis sativa HOM05D003590 ORTHO05D004290 1.0e-97 360.9 321 66.4
Rhsim05G0167200 Rhododendron simsii HOM05D003590 ORTHO05D004290 1.3e-97 360.5 373 60.6
HPP92_009006 Vanilla planifolia HOM05D003590 ORTHO05D004290 1.7e-97 360.1 322 65.5
AUR62006641 Chenopodium quinoa HOM05D003590 ORTHO05D004290 3.8e-97 359.0 336 64.3
Carub.0006s2551 Capsella rubella HOM05D003590 ORTHO05D004290 6.5e-97 358.2 321 64.5
SGA_v2.0_scaffold62G21494 Striga asiatica HOM05D004200 ORTHO05D004996 8.5e-97 357.8 321 66.0
Zm00001eb365760 Zea mays HOM05D003590 ORTHO05D004290 8.5e-97 357.8 321 66.7
AT1G65260 Arabidopsis thaliana HOM05D003590 ORTHO05D004290 1.9e-96 356.7 321 64.2
Nn1g09673 Nelumbo nucifera HOM05D003590 ORTHO05D004290 1.9e-96 356.7 322 66.8
AL2G20260 Arabidopsis lyrata HOM05D003590 ORTHO05D004290 2.5e-96 356.3 321 64.2
Sp5g19930 Schrenkiella parvula HOM05D003590 ORTHO05D004290 1.2e-95 354.0 321 63.6
HanXRQChr05g0149811 Helianthus annuus HOM05D003590 ORTHO05D004290 2.7e-95 352.8 321 64.5
Sabra06G0097800 Salix brachista HOM05D003590 ORTHO05D004290 2.7e-95 352.8 339 65.8
THA.LOC104805702 Tarenaya hassleriana HOM05D003590 ORTHO05D004290 2.7e-95 352.8 321 65.4
CARHR056900 Cardamine hirsuta HOM05D003590 ORTHO05D004290 4.7e-95 352.1 321 63.2
EL10Ac4g10000 Beta vulgaris HOM05D003590 ORTHO05D004290 6.1e-95 351.7 349 61.9
BcaB05g24099 Brassica carinata HOM05D003590 ORTHO05D004290 1.0e-94 350.9 321 63.2
C02p21260 Brassica napus HOM05D003590 ORTHO05D004290 1.4e-94 350.5 321 63.2
BolC2t08266H Brassica oleracea HOM05D003590 ORTHO05D004290 2.3e-94 349.7 321 62.9
Aa31LG2G2380 Aethionema arabicum HOM05D003590 ORTHO05D004290 3.9e-94 349.0 321 62.9
DCAR_002151 Daucus carota HOM05D003590 ORTHO05D004290 3.9e-94 349.0 321 63.6
BcaC03g14688 Brassica carinata HOM05D003590 ORTHO05D004290 6.7e-94 348.2 321 62.9
A02p13120 Brassica napus HOM05D003590 ORTHO05D004290 2.6e-93 346.3 321 62.6
BraA02t06368Z Brassica rapa HOM05D003590 ORTHO05D004290 2.6e-93 346.3 321 62.6
unitig_52.g17513 Utricularia gibba HOM05D003590 ORTHO05D004290 2.6e-93 346.3 321 64.2
Thhalv10018833m.g Eutrema salsugineum HOM05D003590 ORTHO05D004290 2.8e-92 342.8 322 62.4
Sabra16G0098800 Salix brachista HOM05D003590 ORTHO05D004290 8.2e-92 341.3 332 63.9
Glyma.18G243700 Glycine max HOM05D003590 ORTHO05D004290 1.1e-91 340.9 321 62.0
Phvul.008G052900 Phaseolus vulgaris HOM05D003590 ORTHO05D004290 1.4e-91 340.5 318 61.9
Lj1A579G41 Lonicera japonica HOM05D003590 ORTHO05D004290 3.1e-91 339.3 352 59.9
Lsat_1_v5_gn_9_37260 Lactuca sativa HOM05D003590 ORTHO05D004290 7.0e-91 338.2 322 63.0
QL10p052769 Quercus lobata HOM05D003590 ORTHO05D004290 7.0e-91 338.2 197 94.4
Psat7g208480 Pisum sativum HOM05D003590 ORTHO05D004290 1.2e-90 337.4 283 70.7
Cpa.g.sc9.339 Carica papaya HOM05D003590 ORTHO05D004290 5.9e-90 335.1 321 63.6
Lj1g0027383 Lotus japonicus HOM05D003590 ORTHO05D004290 2.5e-88 329.7 321 60.4
SEGI_22814 Sequoiadendron giganteum HOM05D003590 ORTHO05D004290 1.0e-86 324.3 321 58.3
Pp3c2_28040 Physcomitrium patens HOM05D003590 ORTHO05D004290 1.8e-86 323.6 324 58.3
Ah.06g195400 Amaranthus hybridus HOM05D003590 ORTHO05D004290 3.9e-86 322.4 282 67.4
Pp3c7_13570 Physcomitrium patens HOM05D003590 ORTHO05D004290 3.9e-86 322.4 324 58.3
Migut.F01864 Erythranthe guttata HOM05D003590 ORTHO05D004290 1.1e-85 320.9 278 68.7
Nitab4.5_0009796g0040 Nicotiana tabacum HOM05D003590 ORTHO05D004290 4.4e-85 318.9 300 65.3
SGA_v2.0_scaffold122G33190 Striga asiatica HOM05D003590 ORTHO05D004290 3.7e-84 315.8 376 54.5
Mapoly0058s0048 Marchantia polymorpha HOM05D003590 ORTHO05D004290 2.4e-83 313.2 325 57.2
Hund21913 Selenicereus undatus HOM05D003590 ORTHO05D004290 7.7e-82 308.1 321 58.9
ECA246G2345 Erigeron canadensis HOM05D003590 ORTHO05D004290 2.2e-81 306.6 287 63.8
FvH4_6g53380 Fragaria vesca HOM05D003590 ORTHO05D004290 2.9e-81 306.2 321 58.3
AagrBONN_evm.TU.Sc2ySwM_228.379 Anthoceros agrestis HOM05D003590 ORTHO05D004290 6.5e-81 305.1 323 55.4
SMO115G0200 Selaginella moellendorffii HOM05D003590 ORTHO05D004290 3.6e-79 299.3 322 55.3
Hund07359 Selenicereus undatus HOM05D003590 ORTHO05D004290 2.3e-78 296.6 321 55.8
RcHm_v2.0_Chr5g0028111 Rosa chinensis HOM05D003590 ORTHO05D004290 1.2e-77 294.3 319 58.6
FvH4_3g16870 Fragaria vesca HOM05D003590 ORTHO05D004290 2.8e-76 289.7 320 57.5
PSO478G1249 Papaver somniferum HOM05D003590 ORTHO05D004290 7.0e-75 285.0 321 55.5
CSS0008581 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 2.0e-74 283.5 174 87.9
CBR_g79424 Chara braunii HOM05D003590 ORTHO05D004290 2.0e-74 283.5 329 51.7
Oeu010166.1 Olea europaea HOM05D003590 ORTHO05D004290 2.7e-74 283.1 174 88.5
CSS0013807 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 3.2e-72 276.2 174 86.2
PSO782G1591 Papaver somniferum HOM05D003590 ORTHO05D004290 1.2e-71 274.2 293 58.7
PRCOL_00001168 Prasinoderma coloniale HOM05D003590 ORTHO05D004290 2.0e-61 240.4 321 47.0
FAN11G2382 Fragaria x ananassa HOM05D003590 ORTHO05D004290 9.2e-59 231.5 285 54.4
Cpa.g.sc123.34 Carica papaya HOM05D003590 ORTHO05D004290 8.6e-57 224.9 321 48.0
Dinv15392 Davidia involucrata HOM05D003590 ORTHO05D004290 2.1e-55 220.3 229 59.4
vmacro19565 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 4.7e-55 219.2 224 60.3
TWI36G0235 Tripterygium wilfordii HOM05D003590 ORTHO05D004290 8.0e-55 218.4 218 61.0
Pp3c10_14840 Physcomitrium patens HOM05D003590 ORTHO05D004290 3.4e-53 213.0 197 56.9
SHI32795 Sapria himalayana HOM05D003590 ORTHO05D004290 1.9e-51 207.2 210 59.5
Actinidia06797 Actinidia chinensis HOM05D003590 ORTHO05D004290 6.8e-46 188.7 269 50.6
FAN16G0742 Fragaria x ananassa HOM05D003590 ORTHO05D004290 2.2e-44 183.7 285 47.4
Lsat_1_v5_gn_1_99340 Lactuca sativa HOM05D003590 ORTHO05D004290 2.9e-44 183.3 126 81.0
AagrBONN_evm.TU.Sc2ySwM_228.2375 Anthoceros agrestis HOM05D003590 ORTHO05D004290 1.5e-40 171.0 174 54.0
Cre11.g468050 Chlamydomonas reinhardtii HOM05D003590 ORTHO05D004290 7.3e-40 168.7 184 51.6
Cre13.g583550 Chlamydomonas reinhardtii HOM05D003590 ORTHO05D004290 7.3e-40 168.7 155 58.7
Hma1.2p1_0831F.1_g225440 Hydrangea macrophylla HOM05D003590 ORTHO05D004290 2.1e-39 167.2 99 91.9
vmacro19566 Vaccinium macrocarpon HOM05D003590 ORTHO05D004290 2.1e-39 167.2 98 87.8
ECA246G3922 Erigeron canadensis HOM05D003590 ORTHO05D004290 4.7e-39 166.0 311 39.9
CBR_g16972 Chara braunii HOM05D003590 ORTHO05D004290 8.1e-39 165.2 295 38.0
MD15G1434500 Malus domestica HOM05D003590 ORTHO05D004290 1.3e-36 157.9 93 88.2
CBR_g29875 Chara braunii HOM05D003594 ORTHO05D000497 9.2e-35 151.8 122 68.0
FAN19G0667 Fragaria x ananassa HOM05D003590 ORTHO05D004290 1.7e-33 147.5 98 80.6
Lj4g0013306 Lotus japonicus HOM05D003590 ORTHO05D004290 2.5e-32 143.7 94 80.9
MCO10G215 Micromonas commoda HOM05D003590 ORTHO05D004290 2.5e-32 143.7 323 36.2
AUR62000295 Chenopodium quinoa HOM05D003590 ORTHO05D004290 6.0e-26 122.5 167 47.3
QL11p022255 Quercus lobata HOM05D003590 ORTHO05D004290 1.5e-24 117.9 70 92.9
CSS0007792 Camellia sinensis var. sinensis HOM05D003590 ORTHO05D004290 4.9e-20 102.8 147 46.3
GSVIVG01036624001 Vitis vinifera HOM05D003590 ORTHO05D004290 8.4e-20 102.1 75 69.3
Ca_29066_v3 Cicer arietinum L. HOM05D003590 ORTHO05D147848 4.6e-18 96.3 186 31.7
Oeu010165.1 Olea europaea HOM05D003590 ORTHO05D004290 5.6e-16 89.4 145 42.8
AL2G21120 Arabidopsis lyrata HOM05D003590 ORTHO05D004290 2.1e-15 87.4 50 88.0
AL2G21940 Arabidopsis lyrata HOM05D003590 ORTHO05D004290 4.8e-15 86.3 49 87.8
arahy.Tifrunner.gnm1.ann1.Z3LWFH Arachis hypogaea HOM05D000145 ORTHO05D000115 3.4e-13 80.1 51 90.2
FAN19G0592 Fragaria x ananassa HOM05D003590 ORTHO05D004290 3.4e-13 80.1 47 83.0
CiPaw.09G006800 Carya illinoinensis HOM05D003590 ORTHO05D004290 1.1e-11 75.1 128 45.3
EL10Ac4g08485 Beta vulgaris HOM05D003590 ORTHO05D004290 1.9e-11 74.3 48 79.2
EL10Ac4g08487 Beta vulgaris HOM05D003590 ORTHO05D004290 1.9e-11 74.3 48 79.2
Rhsim05G0167400 Rhododendron simsii HOM05D003590 ORTHO05D004290 2.4e-06 57.4 40 70.0


User provided reference genes

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