Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01400 Corylus avellana HOM05D005939 ORTHO05D007412 1.4e-37 159.1 77 100.0
Haze_01405 Corylus avellana HOM05D005939 ORTHO05D007412 1.4e-18 95.9 84 65.5
Haze_01409 Corylus avellana HOM05D005939 ORTHO05D007412 1.4e-18 95.9 84 65.5
Phvul.011G051700 Phaseolus vulgaris HOM05D005939 ORTHO05D007412 1.2e-17 92.8 84 63.1
Glyma.11G124900 Glycine max HOM05D005939 ORTHO05D007412 1.6e-17 92.4 84 63.1
Glyma.12G049500 Glycine max HOM05D005939 ORTHO05D007412 1.6e-17 92.4 84 63.1
TAR365G0833 Trochodendron aralioides HOM05D005939 ORTHO05D007412 1.6e-17 92.4 84 63.1
PGR044G0374 Punica granatum HOM05D005939 ORTHO05D007412 2.1e-17 92.0 84 61.9
Sc05g0005150 Simmondsia chinensis HOM05D005939 ORTHO05D007412 2.1e-17 92.0 84 63.1
Aa31LG1G25290 Aethionema arabicum HOM05D005939 ORTHO05D007412 3.6e-17 91.3 84 60.7
Carub.0004s2605 Capsella rubella HOM05D005939 ORTHO05D007412 3.6e-17 91.3 84 60.7
Thhalv10001621m.g Eutrema salsugineum HOM05D005939 ORTHO05D007412 3.6e-17 91.3 84 60.7
Hma1.2p1_1220F.1_g268050 Hydrangea macrophylla HOM05D005939 ORTHO05D007412 3.6e-17 91.3 84 61.9
Hma1.2p1_1220F.1_g268060 Hydrangea macrophylla HOM05D005939 ORTHO05D007412 3.6e-17 91.3 84 61.9
Sp4g25670 Schrenkiella parvula HOM05D005939 ORTHO05D007412 3.6e-17 91.3 84 60.7
Ah.13g073680 Amaranthus hybridus HOM05D005939 ORTHO05D007412 6.1e-17 90.5 84 61.9
ATR0743G264 Amborella trichopoda HOM05D005939 ORTHO05D007412 6.1e-17 90.5 84 61.9
Nn1g09731 Nelumbo nucifera HOM05D005939 ORTHO05D007412 7.9e-17 90.1 100 54.0
vmacro00653 Vaccinium macrocarpon HOM05D005939 ORTHO05D007412 1.0e-16 89.7 84 61.9
BcaB06g29327 Brassica carinata HOM05D005939 ORTHO05D007412 1.3e-16 89.4 84 59.5
BcaC02g07165 Brassica carinata HOM05D005939 ORTHO05D007412 1.3e-16 89.4 84 59.5
A04p32840 Brassica napus HOM05D005939 ORTHO05D007412 1.3e-16 89.4 84 59.5
C04p70550 Brassica napus HOM05D005939 ORTHO05D007412 1.3e-16 89.4 84 59.5
BolC4t28556H Brassica oleracea HOM05D005939 ORTHO05D007412 1.3e-16 89.4 84 59.5
BraA04t18746Z Brassica rapa HOM05D005939 ORTHO05D007412 1.3e-16 89.4 84 59.5
PGR044G0222 Punica granatum HOM05D005939 ORTHO05D007412 1.3e-16 89.4 84 60.7
QL10p052591 Quercus lobata HOM05D005939 ORTHO05D007412 1.3e-16 89.4 83 60.2
Ciclev10021893m.g Citrus clementina HOM05D005939 ORTHO05D007412 2.3e-16 88.6 84 60.7
Dinv44170 Davidia involucrata HOM05D005939 ORTHO05D007412 2.3e-16 88.6 83 59.0
Lj3g0005991 Lotus japonicus HOM05D005939 ORTHO05D007412 2.3e-16 88.6 80 62.5
THA.LOC104803948 Tarenaya hassleriana HOM05D005939 ORTHO05D007412 2.3e-16 88.6 84 59.5
AL4G42360 Arabidopsis lyrata HOM05D005939 ORTHO05D007412 3.0e-16 88.2 84 58.3
PSO017G1523 Papaver somniferum HOM05D005939 ORTHO05D007412 3.0e-16 88.2 84 59.5
EL10Ac3g06033 Beta vulgaris HOM05D005939 ORTHO05D007412 3.9e-16 87.8 82 59.8
RcHm_v2.0_Chr4g0406301 Rosa chinensis HOM05D005939 ORTHO05D007412 3.9e-16 87.8 84 59.5
arahy.Tifrunner.gnm1.ann1.2A1NT4 Arachis hypogaea HOM05D005939 ORTHO05D007412 5.1e-16 87.4 84 60.7
CiPaw.01G172900 Carya illinoinensis HOM05D005939 ORTHO05D007412 5.1e-16 87.4 84 60.7
Gorai.005G125400 Gossypium raimondii HOM05D005939 ORTHO05D007412 5.1e-16 87.4 79 62.0
HanXRQChr14g0433821 Helianthus annuus HOM05D005939 ORTHO05D007412 5.1e-16 87.4 84 60.7
PSO675G4893 Papaver somniferum HOM05D005939 ORTHO05D007412 5.1e-16 87.4 84 59.5
DCAR_028412 Daucus carota HOM05D005939 ORTHO05D007412 6.7e-16 87.0 84 59.5
AT2G43560 Arabidopsis thaliana HOM05D005939 ORTHO05D007412 8.7e-16 86.7 84 58.3
CAN.G1263.30 Capsicum annuum HOM05D005939 ORTHO05D007412 8.7e-16 86.7 84 58.3
ECA238G2261 Erigeron canadensis HOM05D005939 ORTHO05D007412 8.7e-16 86.7 84 59.5
Prupe.1G203000 Prunus persica HOM05D005939 ORTHO05D007412 8.7e-16 86.7 84 59.5
VMungo1127G1625 Vigna mungo HOM05D005939 ORTHO05D007412 8.7e-16 86.7 84 60.7
ClCG07G015100 Citrullus lanatus HOM05D005939 ORTHO05D007412 1.1e-15 86.3 84 59.5
CsaV3_4G002650 Cucumis sativus L. HOM05D005939 ORTHO05D007412 1.1e-15 86.3 84 59.5
FvH4_4g10650 Fragaria vesca HOM05D005939 ORTHO05D007412 1.1e-15 86.3 84 58.3
FAN07G1487 Fragaria x ananassa HOM05D005939 ORTHO05D007412 1.1e-15 86.3 84 58.3
FAN12G1526 Fragaria x ananassa HOM05D005939 ORTHO05D007412 1.1e-15 86.3 84 58.3
FAN12G3158 Fragaria x ananassa HOM05D005939 ORTHO05D007412 1.1e-15 86.3 84 58.3
Lj2C294T20 Lonicera japonica HOM05D005939 ORTHO05D007412 1.1e-15 86.3 84 58.3
Sed0015623 Sechium edule HOM05D005939 ORTHO05D007412 1.1e-15 86.3 84 58.3
Cc06_g20200 Coffea canephora HOM05D005939 ORTHO05D007412 1.5e-15 85.9 84 60.7
Duzib212G0518 Durio zibethinus HOM05D005939 ORTHO05D007412 1.5e-15 85.9 79 60.8
Psat7g208400 Pisum sativum HOM05D005939 ORTHO05D007412 1.5e-15 85.9 84 59.5
Aqoxy2G04151 Aquilegia oxysepala HOM05D005939 ORTHO05D007412 1.9e-15 85.5 84 58.3
Manes.04G037900 Manihot esculenta HOM05D005939 ORTHO05D007412 1.9e-15 85.5 82 59.8
Nitab4.5_0006294g0010 Nicotiana tabacum HOM05D005939 ORTHO05D007412 1.9e-15 85.5 84 59.5
Sabra17G0005000 Salix brachista HOM05D005939 ORTHO05D007412 1.9e-15 85.5 84 58.3
Sabra17G0013700 Salix brachista HOM05D005939 ORTHO05D007412 1.9e-15 85.5 84 58.3
CANSAT64G1160 Cannabis sativa HOM05D005939 ORTHO05D007412 2.5e-15 85.1 82 59.8
Nitab4.5_0000147g0370 Nicotiana tabacum HOM05D005939 ORTHO05D007412 2.5e-15 85.1 84 59.5
Peaxi162Scf00811g00112 Petunia axillaris HOM05D005939 ORTHO05D007412 2.5e-15 85.1 84 59.5
arahy.Tifrunner.gnm1.ann1.K9Q8M8 Arachis hypogaea HOM05D005939 ORTHO05D007412 3.3e-15 84.7 82 59.8
AUR62002369 Chenopodium quinoa HOM05D005939 ORTHO05D007412 3.3e-15 84.7 82 59.8
AUR62023817 Chenopodium quinoa HOM05D000031 ORTHO05D007412 3.3e-15 84.7 82 59.8
Potri.017G017500 Populus trichocarpa HOM05D005939 ORTHO05D007412 3.3e-15 84.7 84 58.3
Ca_20809_v3 Cicer arietinum L. HOM05D005939 ORTHO05D007412 4.3e-15 84.3 83 57.8
Eucgr.C02176 Eucalyptus grandis HOM05D005939 ORTHO05D007412 4.3e-15 84.3 84 59.5
GSVIVG01038097001 Vitis vinifera HOM05D005939 ORTHO05D007412 4.3e-15 84.3 84 58.3
Potri.007G134600 Populus trichocarpa HOM05D005939 ORTHO05D007412 5.7e-15 84.0 84 58.3
PGSC0003DMG400015011 Solanum tuberosum HOM05D005939 ORTHO05D007412 5.7e-15 84.0 84 56.0
CSS0033753 Camellia sinensis var. sinensis HOM05D005939 ORTHO05D007412 7.4e-15 83.6 77 58.4
CARHR138670 Cardamine hirsuta HOM05D005939 ORTHO05D007412 7.4e-15 83.6 83 55.4
Lsat_1_v5_gn_2_34361 Lactuca sativa HOM05D005939 ORTHO05D007412 7.4e-15 83.6 83 59.0
Medtr4g068190 Medicago truncatula HOM05D005939 ORTHO05D007412 7.4e-15 83.6 84 56.0
TPR.G34240 Trifolium pratense HOM05D005939 ORTHO05D007412 9.7e-15 83.2 83 55.4
Lalb_Chr03g0026021 Lupinus albus HOM05D005939 ORTHO05D007412 1.6e-14 82.4 83 57.8
Oeu032137.1 Olea europaea HOM05D005939 ORTHO05D007412 1.6e-14 82.4 84 59.5
Thecc.04G170700 Theobroma cacao HOM05D005939 ORTHO05D007412 1.6e-14 82.4 79 60.8
Solyc04g015040.3 Solanum lycopersicum HOM05D005939 ORTHO05D007412 2.8e-14 81.6 84 54.8
Sopen04g007060 Solanum pennellii HOM05D005939 ORTHO05D007412 2.8e-14 81.6 84 54.8
TWI38G2333 Tripterygium wilfordii HOM05D005939 ORTHO05D007412 2.8e-14 81.6 84 57.1
Os08g0541400 Oryza sativa ssp. japonica HOM05D005939 ORTHO05D007412 3.7e-14 81.3 79 58.2
MSTRG.22020 Avicennia marina HOM05D005939 ORTHO05D007412 4.8e-14 80.9 79 58.2
Migut.N03077 Erythranthe guttata HOM05D005939 ORTHO05D007412 6.3e-14 80.5 84 58.3
Hund03189 Selenicereus undatus HOM05D005939 ORTHO05D007412 1.1e-13 79.7 84 56.0
HPP92_001251 Vanilla planifolia HOM05D005939 ORTHO05D007412 1.1e-13 79.7 79 57.0
HPP92_001268 Vanilla planifolia HOM05D005939 ORTHO05D007412 1.1e-13 79.7 79 57.0
Atru.chr4.1353 Acer truncatum HOM05D005939 ORTHO05D007412 1.4e-13 79.3 84 56.0
CDE02G1670 Ceratophyllum demersum HOM05D005939 ORTHO05D007412 2.4e-13 78.6 79 55.7
SGA_v2.0_scaffold19G08830 Striga asiatica HOM05D005939 ORTHO05D007412 5.3e-13 77.4 79 57.0
unitig_578.g16716 Utricularia gibba HOM05D005939 ORTHO05D007412 6.9e-13 77.0 79 53.2
FAN12G0599 Fragaria x ananassa HOM05D005939 ORTHO05D007412 1.2e-12 76.3 41 82.9
AagrBONN_evm.TU.Sc2ySwM_228.5810 Anthoceros agrestis HOM05D005939 ORTHO05D007412 2.6e-12 75.1 84 51.2
Pp3c4_8140 Physcomitrium patens HOM05D005939 ORTHO05D007412 2.6e-12 75.1 84 53.6
CBR_g49189 Chara braunii HOM05D005939 ORTHO05D007412 1.7e-11 72.4 83 49.4
SMO145G0045 Selaginella moellendorffii HOM05D005939 ORTHO05D007412 3.8e-11 71.2 78 50.0
Cre12.g530300 Chlamydomonas reinhardtii HOM05D005939 ORTHO05D007412 6.5e-11 70.5 82 47.6
Mapoly0034s0118 Marchantia polymorpha HOM05D005939 ORTHO05D007412 3.2e-10 68.2 83 49.4
MCO01G461 Micromonas commoda HOM05D005939 ORTHO05D007412 7.9e-09 63.5 37 75.7


User provided reference genes

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