Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01382 Corylus avellana HOM05D003411 ORTHO05D003914 3.3e-80 301.6 146 100.0
Haze_11665 Corylus avellana HOM05D003411 ORTHO05D003914 1.8e-49 199.5 95 94.7
Cfa008639 Carpinus fangiana HOM05D003411 ORTHO05D003914 1.6e-47 193.0 105 84.8
MD04G1018500 Malus domestica HOM05D003411 ORTHO05D003914 3.1e-46 188.7 95 89.5
Duzib212G0817 Durio zibethinus HOM05D003411 ORTHO05D003914 4.0e-46 188.3 93 89.2
QL07p010164 Quercus lobata HOM05D003411 ORTHO05D003914 4.0e-46 188.3 93 89.2
QL06p026812 Quercus lobata HOM05D003411 ORTHO05D003914 6.9e-46 187.6 93 89.2
Gohir.A10G128900 Gossypium hirsutum HOM05D003411 ORTHO05D003914 2.0e-45 186.0 93 88.2
vmacro00433 Vaccinium macrocarpon HOM05D003411 ORTHO05D003914 2.0e-45 186.0 93 88.2
CANSAT78G0444 Cannabis sativa HOM05D003411 ORTHO05D003914 3.4e-45 185.3 95 85.3
Gohir.D02G021700 Gossypium hirsutum HOM05D003411 ORTHO05D003914 3.4e-45 185.3 95 87.4
Actinidia35836 Actinidia chinensis HOM05D003411 ORTHO05D003914 4.5e-45 184.9 93 88.2
MBI07_g08879_MAGBIO Magnolia biondii HOM05D003411 ORTHO05D003914 4.5e-45 184.9 93 87.1
arahy.Tifrunner.gnm1.ann1.E7M6AK Arachis hypogaea HOM05D003411 ORTHO05D003914 5.8e-45 184.5 93 87.1
arahy.Tifrunner.gnm1.ann1.EMW6AM Arachis hypogaea HOM05D003411 ORTHO05D003914 5.8e-45 184.5 93 87.1
Duzib151G0297 Durio zibethinus HOM05D003411 ORTHO05D003914 5.8e-45 184.5 93 88.2
Gorai.005G027200 Gossypium raimondii HOM05D003411 ORTHO05D003914 5.8e-45 184.5 95 86.3
Rhsim09G0061400 Rhododendron simsii HOM05D003411 ORTHO05D003914 5.8e-45 184.5 93 87.1
Potri.017G060000 Populus trichocarpa HOM05D003411 ORTHO05D003914 7.6e-45 184.1 93 86.0
Glyma.11G254300 Glycine max HOM05D003411 ORTHO05D003914 1.0e-44 183.7 93 84.9
Manes.01G003200 Manihot esculenta HOM05D003411 ORTHO05D003914 1.0e-44 183.7 93 86.0
Thecc.04G193400 Theobroma cacao HOM05D003411 ORTHO05D003914 1.0e-44 183.7 93 87.1
arahy.Tifrunner.gnm1.ann1.MR4BJU Arachis hypogaea HOM05D003411 ORTHO05D003914 1.3e-44 183.3 93 86.0
Glyma.18G002800 Glycine max HOM05D003411 ORTHO05D003914 1.7e-44 183.0 93 84.9
Gohir.D10G137200 Gossypium hirsutum HOM05D003411 ORTHO05D003914 1.7e-44 183.0 89 91.0
Gorai.011G152400 Gossypium raimondii HOM05D003411 ORTHO05D003914 1.7e-44 183.0 89 91.0
Sabra16G0203800 Salix brachista HOM05D003411 ORTHO05D003914 1.7e-44 183.0 92 87.0
MELO3C021162.2 Cucumis melo HOM05D003411 ORTHO05D003914 2.2e-44 182.6 93 86.0
Potri.001G321600 Populus trichocarpa HOM05D003411 ORTHO05D003914 2.2e-44 182.6 93 84.9
RcHm_v2.0_Chr4g0413261 Rosa chinensis HOM05D003411 ORTHO05D003914 2.2e-44 182.6 93 88.2
Sabra17G0053800 Salix brachista HOM05D003411 ORTHO05D003914 2.2e-44 182.6 93 84.9
TPR.G28943 Trifolium pratense HOM05D003411 ORTHO05D003914 2.2e-44 182.6 93 86.0
arahy.Tifrunner.gnm1.ann1.GXY8DM Arachis hypogaea HOM05D003411 ORTHO05D003914 2.9e-44 182.2 93 84.9
CsaV3_6G001060 Cucumis sativus L. HOM05D003411 ORTHO05D003914 2.9e-44 182.2 93 86.0
ATR0602G172 Amborella trichopoda HOM05D003411 ORTHO05D003914 3.8e-44 181.8 95 84.2
ClCG06G003230 Citrullus lanatus HOM05D003411 ORTHO05D003914 3.8e-44 181.8 93 86.0
Eucgr.H02650 Eucalyptus grandis HOM05D003411 ORTHO05D003914 3.8e-44 181.8 93 87.1
FvH4_4g13170 Fragaria vesca HOM05D003411 ORTHO05D003914 4.9e-44 181.4 93 87.1
FAN07G1736 Fragaria x ananassa HOM05D003411 ORTHO05D003914 4.9e-44 181.4 93 87.1
FAN12G0475 Fragaria x ananassa HOM05D003411 ORTHO05D003914 4.9e-44 181.4 93 87.1
Nitab4.5_0000451g0080 Nicotiana tabacum HOM05D003411 ORTHO05D003914 4.9e-44 181.4 95 84.2
SGA_v2.0_scaffold19G08787 Striga asiatica HOM05D003411 ORTHO05D003914 4.9e-44 181.4 93 84.9
CAN.G1155.14 Capsicum annuum HOM05D003411 ORTHO05D003914 6.5e-44 181.0 93 84.9
Dinv18405 Davidia involucrata HOM05D003411 ORTHO05D003914 8.4e-44 180.6 93 84.9
Glyma.08G108000 Glycine max HOM05D003411 ORTHO05D003914 8.4e-44 180.6 93 84.9
Gohir.A02G018400 Gossypium hirsutum HOM05D003411 ORTHO05D003914 8.4e-44 180.6 95 85.3
Lj6g0005715 Lotus japonicus HOM05D003411 ORTHO05D003914 8.4e-44 180.6 93 84.9
Cc03_g09400 Coffea canephora HOM05D003411 ORTHO05D003914 1.1e-43 180.3 93 83.9
COL.COLO4_05435 Corchorus olitorius HOM05D003411 ORTHO05D003914 1.1e-43 180.3 93 83.9
Ca_16422_v3 Cicer arietinum L. HOM05D003411 ORTHO05D003914 1.4e-43 179.9 93 84.9
Lalb_Chr23g0278281 Lupinus albus HOM05D003411 ORTHO05D003914 1.4e-43 179.9 95 83.2
SalBow3G1551 Salvia bowleyana HOM05D003411 ORTHO05D003914 1.4e-43 179.9 93 84.9
Sed0020137 Sechium edule HOM05D003411 ORTHO05D003914 1.4e-43 179.9 93 84.9
Hund19016 Selenicereus undatus HOM05D003411 ORTHO05D003914 1.4e-43 179.9 93 86.0
AT3G23800 Arabidopsis thaliana HOM05D003411 ORTHO05D003914 1.9e-43 179.5 95 83.2
PSO017G0142 Papaver somniferum HOM05D003411 ORTHO05D003914 1.9e-43 179.5 95 82.1
PSO063G3966 Papaver somniferum HOM05D003411 ORTHO05D003914 1.9e-43 179.5 95 82.1
PGR083G0313 Punica granatum HOM05D003411 ORTHO05D003914 1.9e-43 179.5 95 83.2
TWI53G0146 Tripterygium wilfordii HOM05D003411 ORTHO05D003914 1.9e-43 179.5 93 84.9
TAR636G0144 Trochodendron aralioides HOM05D003411 ORTHO05D003914 1.9e-43 179.5 93 83.9
VMungo1383G0705 Vigna mungo HOM05D003411 ORTHO05D003914 1.9e-43 179.5 93 83.9
PSO017G4415 Papaver somniferum HOM05D003411 ORTHO05D003914 2.5e-43 179.1 95 81.1
GSVIVG01021049001 Vitis vinifera HOM05D003411 ORTHO05D003914 2.5e-43 179.1 95 84.2
Cpa.g.sc157.38 Carica papaya HOM05D003411 ORTHO05D003914 3.2e-43 178.7 93 84.9
AUR62018543 Chenopodium quinoa HOM05D003411 ORTHO05D003914 3.2e-43 178.7 95 84.2
AUR62020875 Chenopodium quinoa HOM05D003411 ORTHO05D003914 3.2e-43 178.7 95 84.2
Solyc09g092430.3 Solanum lycopersicum HOM05D003411 ORTHO05D003914 3.2e-43 178.7 93 82.8
CiPaw.01G115300 Carya illinoinensis HOM05D003411 ORTHO05D003914 4.2e-43 178.3 95 84.2
Medtr3g084410 Medicago truncatula HOM05D003411 ORTHO05D003914 4.2e-43 178.3 93 83.9
Phvul.001G265900 Phaseolus vulgaris HOM05D003411 ORTHO05D003914 4.2e-43 178.3 93 82.8
Prupe.1G167300 Prunus persica HOM05D003411 ORTHO05D003914 4.2e-43 178.3 95 82.1
CSS0031323 Camellia sinensis var. sinensis HOM05D003411 ORTHO05D003914 5.5e-43 177.9 93 84.9
DCAR_026664 Daucus carota HOM05D003411 ORTHO05D003914 5.5e-43 177.9 93 82.8
Glyma.05G151300 Glycine max HOM05D003411 ORTHO05D003914 5.5e-43 177.9 92 85.9
Peaxi162Scf00286g01031 Petunia axillaris HOM05D003411 ORTHO05D003914 5.5e-43 177.9 93 82.8
Ah.13g077880 Amaranthus hybridus HOM05D003411 ORTHO05D003914 7.1e-43 177.6 93 84.9
Carub.0003s2410 Capsella rubella HOM05D003411 ORTHO05D003914 7.1e-43 177.6 95 81.1
Gohir.D02G021800 Gossypium hirsutum HOM05D003411 ORTHO05D003914 7.1e-43 177.6 93 81.7
Atru.chr4.1551 Acer truncatum HOM05D003411 ORTHO05D003914 9.3e-43 177.2 93 81.7
CARHR099780 Cardamine hirsuta HOM05D003411 ORTHO05D003914 9.3e-43 177.2 95 81.1
Gohir.A02G018500 Gossypium hirsutum HOM05D003411 ORTHO05D003914 9.3e-43 177.2 93 81.7
BcaB06g26541 Brassica carinata HOM05D003411 ORTHO05D003914 1.2e-42 176.8 105 76.2
CANSAT78G1476 Cannabis sativa HOM05D003411 ORTHO05D003914 1.2e-42 176.8 95 81.1
Psat5g099520 Pisum sativum HOM05D003411 ORTHO05D003914 1.2e-42 176.8 93 81.7
PGSC0003DMG400020582 Solanum tuberosum HOM05D003411 ORTHO05D003914 1.2e-42 176.8 93 81.7
CDE07G1304 Ceratophyllum demersum HOM05D003411 ORTHO05D003914 1.6e-42 176.4 93 83.9
Aqoxy2G03916 Aquilegia oxysepala HOM05D003411 ORTHO05D003914 2.1e-42 176.0 95 81.1
EL10Ac3g07442 Beta vulgaris HOM05D003411 ORTHO05D003914 2.1e-42 176.0 93 83.9
BcaC06g35570 Brassica carinata HOM05D003411 ORTHO05D003914 2.1e-42 176.0 105 75.2
C07p13410 Brassica napus HOM05D003411 ORTHO05D003914 2.1e-42 176.0 105 75.2
BolC7t41836H Brassica oleracea HOM05D003411 ORTHO05D003914 2.1e-42 176.0 105 75.2
CiPaw.02G062900 Carya illinoinensis HOM05D003411 ORTHO05D003914 2.1e-42 176.0 93 82.8
Sopen09g035330 Solanum pennellii HOM05D003411 ORTHO05D003914 2.1e-42 176.0 93 81.7
BraA07t28648Z Brassica rapa HOM05D003411 ORTHO05D003914 2.7e-42 175.6 105 75.2
CiPaw.02G063100 Carya illinoinensis HOM05D003411 ORTHO05D003914 2.7e-42 175.6 93 82.8
Gohir.A02G018900 Gossypium hirsutum HOM05D003411 ORTHO05D003914 2.7e-42 175.6 93 81.7
Carub.0007s2839 Capsella rubella HOM05D003411 ORTHO05D003914 4.6e-42 174.9 93 80.6
SalBow8G4879 Salvia bowleyana HOM05D003411 ORTHO05D003914 4.6e-42 174.9 93 79.6
Sp7g11850 Schrenkiella parvula HOM05D003411 ORTHO05D003914 4.6e-42 174.9 93 80.6
THA.LOC104804791 Tarenaya hassleriana HOM05D003411 ORTHO05D003914 4.6e-42 174.9 93 79.6
AT4G14030 Arabidopsis thaliana HOM05D003411 ORTHO05D003914 6.0e-42 174.5 103 75.7
AT4G14040 Arabidopsis thaliana HOM05D003411 ORTHO05D003914 6.0e-42 174.5 93 80.6
BcaB04g18108 Brassica carinata HOM05D003411 ORTHO05D003914 6.0e-42 174.5 93 80.6
BcaC07g37715 Brassica carinata HOM05D003411 ORTHO05D003914 6.0e-42 174.5 93 80.6
A08p10280 Brassica napus HOM05D003411 ORTHO05D003914 6.0e-42 174.5 93 80.6
BolC8t48094H Brassica oleracea HOM05D003411 ORTHO05D003914 6.0e-42 174.5 93 80.6
BraA08t33026Z Brassica rapa HOM05D003411 ORTHO05D003914 6.0e-42 174.5 93 80.6
CARHR220050 Cardamine hirsuta HOM05D003411 ORTHO05D003914 6.0e-42 174.5 93 80.6
Thhalv10025040m.g Eutrema salsugineum HOM05D003411 ORTHO05D003914 6.0e-42 174.5 93 80.6
Gorai.005G027300 Gossypium raimondii HOM05D003411 ORTHO05D003914 6.0e-42 174.5 93 80.6
Lj6C367T9 Lonicera japonica HOM05D003411 ORTHO05D003914 6.0e-42 174.5 95 80.0
THA.LOC104822225 Tarenaya hassleriana HOM05D003411 ORTHO05D003914 6.0e-42 174.5 93 80.6
Gohir.D02G021500 Gossypium hirsutum HOM05D003411 ORTHO05D003914 7.9e-42 174.1 93 80.6
Hma1.2p1_2624F.1_g325610 Hydrangea macrophylla HOM05D003411 ORTHO05D003914 7.9e-42 174.1 93 82.8
SalBow8G2610 Salvia bowleyana HOM05D003411 ORTHO05D003914 7.9e-42 174.1 93 80.6
Thhalv10024991m.g Eutrema salsugineum HOM05D003411 ORTHO05D003914 1.0e-41 173.7 93 79.6
AL7G42390 Arabidopsis lyrata HOM05D003411 ORTHO05D003914 1.3e-41 173.3 93 79.6
BcaB02g08636 Brassica carinata HOM05D003411 ORTHO05D003914 1.3e-41 173.3 93 79.6
A04p08100 Brassica napus HOM05D003411 ORTHO05D003914 1.3e-41 173.3 93 79.6
A04p08110 Brassica napus HOM05D003411 ORTHO05D003914 1.3e-41 173.3 93 79.6
BraA04t16498Z Brassica rapa HOM05D003411 ORTHO05D003914 1.3e-41 173.3 93 79.6
BraA04t16500Z Brassica rapa HOM05D003411 ORTHO05D003914 1.3e-41 173.3 93 79.6
SEGI_38348 Sequoiadendron giganteum HOM05D003411 ORTHO05D003914 1.3e-41 173.3 93 79.6
BcaB02g08638 Brassica carinata HOM05D003411 ORTHO05D003914 1.8e-41 172.9 93 79.6
BcaB04g18107 Brassica carinata HOM05D003411 ORTHO05D003914 1.8e-41 172.9 93 79.6
BcaC02g09367 Brassica carinata HOM05D003411 ORTHO05D003914 1.8e-41 172.9 93 79.6
A07p08590 Brassica napus HOM05D003411 ORTHO05D003914 1.8e-41 172.9 105 74.3
C04p41770 Brassica napus HOM05D003411 ORTHO05D003914 1.8e-41 172.9 93 79.6
BolC4t25759H Brassica oleracea HOM05D003411 ORTHO05D003914 1.8e-41 172.9 93 79.6
ECA233G4116 Erigeron canadensis HOM05D003411 ORTHO05D003914 1.8e-41 172.9 93 80.6
Gorai.005G027000 Gossypium raimondii HOM05D003411 ORTHO05D003914 1.8e-41 172.9 93 80.6
Thhalv10002510m.g Eutrema salsugineum HOM05D003411 ORTHO05D003914 2.3e-41 172.6 92 81.5
Gohir.A02G018300 Gossypium hirsutum HOM05D003411 ORTHO05D003914 2.3e-41 172.6 93 80.6
Carub.0007s2838 Capsella rubella HOM05D003411 ORTHO05D003914 3.0e-41 172.2 93 78.5
AL7G42400 Arabidopsis lyrata HOM05D003411 ORTHO05D003914 3.9e-41 171.8 93 78.5
A08p10270 Brassica napus HOM05D003411 ORTHO05D003914 3.9e-41 171.8 93 78.5
BraA08t33025Z Brassica rapa HOM05D003411 ORTHO05D003914 3.9e-41 171.8 93 78.5
Ciclev10004848m.g Citrus clementina HOM05D003411 ORTHO05D003914 3.9e-41 171.8 93 80.6
Gohir.D02G021600 Gossypium hirsutum HOM05D003411 ORTHO05D003914 3.9e-41 171.8 93 80.6
Gorai.005G027100 Gossypium raimondii HOM05D003411 ORTHO05D003914 3.9e-41 171.8 93 80.6
CARHR220040 Cardamine hirsuta HOM05D003411 ORTHO05D003914 8.7e-41 170.6 93 78.5
Migut.N00427 Erythranthe guttata HOM05D003411 ORTHO05D003914 8.7e-41 170.6 93 80.6
BcaB04g18106 Brassica carinata HOM05D003411 ORTHO05D003914 1.1e-40 170.2 93 77.4
BcaC07g37697 Brassica carinata HOM05D003411 ORTHO05D003914 1.1e-40 170.2 93 77.4
A08p10260 Brassica napus HOM05D003411 ORTHO05D003914 1.1e-40 170.2 93 77.4
BolC8t48088H Brassica oleracea HOM05D003411 ORTHO05D003914 1.1e-40 170.2 93 77.4
BraA08t33023Z Brassica rapa HOM05D003411 ORTHO05D003914 1.1e-40 170.2 93 77.4
HanXRQChr02g0058461 Helianthus annuus HOM05D003411 ORTHO05D003914 1.1e-40 170.2 95 77.9
Os01g0916400 Oryza sativa ssp. japonica HOM05D003411 ORTHO05D003914 1.1e-40 170.2 94 80.9
Lsat_1_v5_gn_6_59580 Lactuca sativa HOM05D003411 ORTHO05D003914 1.5e-40 169.9 93 80.6
Sp7g11830 Schrenkiella parvula HOM05D003411 ORTHO05D003914 1.5e-40 169.9 93 78.5
BolC8t48092H Brassica oleracea HOM05D003411 ORTHO05D003914 1.9e-40 169.5 93 77.4
Aa31LG9G3320 Aethionema arabicum HOM05D003411 ORTHO05D003914 2.5e-40 169.1 93 77.4
BcaC07g37696 Brassica carinata HOM05D003411 ORTHO05D003914 2.5e-40 169.1 92 78.3
AagrBONN_evm.TU.Sc2ySwM_228.5065 Anthoceros agrestis HOM05D003411 ORTHO05D003914 3.3e-40 168.7 93 79.6
BcaC02g09366 Brassica carinata HOM05D003411 ORTHO05D003914 3.3e-40 168.7 93 77.4
BolC4t25757H Brassica oleracea HOM05D003411 ORTHO05D003914 3.3e-40 168.7 93 77.4
HanXRQChr07g0185571 Helianthus annuus HOM05D003411 ORTHO05D003914 3.3e-40 168.7 93 78.5
Zm00001eb143460 Zea mays HOM05D003411 ORTHO05D003914 7.4e-40 167.5 94 79.8
MSTRG.9788 Avicennia marina HOM05D003411 ORTHO05D003914 1.3e-39 166.8 93 78.5
Hma1.2p1_0349F.1_g131970 Hydrangea macrophylla HOM05D003411 ORTHO05D003914 2.8e-39 165.6 90 82.2
Pp3c11_15680 Physcomitrium patens HOM05D003411 ORTHO05D003914 8.2e-39 164.1 93 76.3
SMO230G0057 Selaginella moellendorffii HOM05D003411 ORTHO05D003914 1.8e-38 162.9 95 74.7
CSS0027208 Camellia sinensis var. sinensis HOM05D003411 ORTHO05D003914 2.2e-36 156.0 93 75.3
Mapoly0004s0070 Marchantia polymorpha HOM05D003411 ORTHO05D003914 2.9e-36 155.6 95 70.5
Medtr8g083160 Medicago truncatula HOM05D003411 ORTHO05D003914 1.9e-35 152.9 93 75.3
Cre03.g166050 Chlamydomonas reinhardtii HOM05D003411 ORTHO05D003914 5.1e-33 144.8 92 66.3
CSS0017016 Camellia sinensis var. sinensis HOM05D003411 ORTHO05D003914 9.1e-30 134.0 93 69.9
ATR0069G041 Amborella trichopoda HOM05D003411 ORTHO05D003914 1.6e-26 123.2 68 76.5
Cfa010561 Carpinus fangiana HOM05D003411 ORTHO05D003914 3.4e-21 105.5 69 75.4
Nn1g08155 Nelumbo nucifera HOM05D003411 ORTHO05D003914 3.4e-21 105.5 56 83.9
Aqoxy3G02005 Aquilegia oxysepala HOM05D003411 ORTHO05D003914 8.5e-20 100.9 56 75.0
Sc07g0006160 Simmondsia chinensis HOM05D003411 ORTHO05D003914 3.6e-10 68.9 37 81.1


User provided reference genes

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