Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01362 Corylus avellana HOM05D006500 ORTHO05D008028 2.2e-140 502.3 253 100.0
CiPaw.01G170700 Carya illinoinensis HOM05D006500 ORTHO05D008028 1.4e-54 217.2 158 72.2
QL10p055774 Quercus lobata HOM05D006500 ORTHO05D008028 2.3e-52 209.9 158 71.5
CiPaw.02G100400 Carya illinoinensis HOM05D006500 ORTHO05D008028 1.9e-51 206.8 158 69.6
CSS0014789 Camellia sinensis var. sinensis HOM05D006500 ORTHO05D008028 2.0e-48 196.8 158 65.8
ClCG06G001100 Citrullus lanatus HOM05D006500 ORTHO05D008028 2.0e-48 196.8 147 67.3
Rhsim09G0010200 Rhododendron simsii HOM05D006500 ORTHO05D008028 2.6e-48 196.4 156 67.9
Ciclev10022516m.g Citrus clementina HOM05D006500 ORTHO05D008028 3.4e-48 196.1 159 66.0
MELO3C022425.2 Cucumis melo HOM05D006500 ORTHO05D008028 5.7e-48 195.3 147 67.3
Sed0015541 Sechium edule HOM05D006500 ORTHO05D008028 5.7e-48 195.3 147 68.0
Cpa.g.sc9.364 Carica papaya HOM05D006500 ORTHO05D008028 9.8e-48 194.5 136 74.3
Potri.019G112100 Populus trichocarpa HOM05D006500 ORTHO05D008028 1.3e-47 194.1 152 67.8
CsaV3_6G007030 Cucumis sativus L. HOM05D006500 ORTHO05D008028 2.8e-47 193.0 147 66.7
Gohir.A05G327700 Gossypium hirsutum HOM05D006500 ORTHO05D008028 3.7e-47 192.6 158 65.2
Gohir.D05G327900 Gossypium hirsutum HOM05D006500 ORTHO05D008028 3.7e-47 192.6 142 69.0
Gorai.009G351800 Gossypium raimondii HOM05D006500 ORTHO05D008028 3.7e-47 192.6 142 69.0
Dinv33205 Davidia involucrata HOM05D006500 ORTHO05D008028 4.9e-47 192.2 148 69.6
Medtr4g087310 Medicago truncatula HOM05D006500 ORTHO05D008028 4.9e-47 192.2 152 65.1
Psat7g120240 Pisum sativum HOM05D006500 ORTHO05D008028 6.3e-47 191.8 147 66.7
Prupe.1G207200 Prunus persica HOM05D006500 ORTHO05D008028 6.3e-47 191.8 158 64.6
Sed0014008 Sechium edule HOM05D006500 ORTHO05D008028 6.3e-47 191.8 147 65.3
vmacro00698 Vaccinium macrocarpon HOM05D006500 ORTHO05D008028 6.3e-47 191.8 156 66.0
Lj4g0023361 Lotus japonicus HOM05D006500 ORTHO05D008028 1.1e-46 191.0 153 65.4
Actinidia27113 Actinidia chinensis HOM05D006500 ORTHO05D008028 1.4e-46 190.7 159 64.8
Hma1.2p1_0108F.1_g051720 Hydrangea macrophylla HOM05D006500 ORTHO05D008028 1.4e-46 190.7 159 67.3
Sabra19G0108100 Salix brachista HOM05D006500 ORTHO05D008028 4.1e-46 189.1 152 65.8
Glyma.07G207800 Glycine max HOM05D006500 ORTHO05D008028 5.4e-46 188.7 153 64.1
Thecc.04G165600 Theobroma cacao HOM05D006500 ORTHO05D008028 5.4e-46 188.7 136 69.9
MD04G1049100 Malus domestica HOM05D006500 ORTHO05D008028 9.2e-46 188.0 159 63.5
MD17G1177800 Malus domestica HOM05D006500 ORTHO05D008028 9.2e-46 188.0 158 62.7
Aqoxy2G00124 Aquilegia oxysepala HOM05D006500 ORTHO05D008028 1.2e-45 187.6 149 65.1
Duzib268G0518 Durio zibethinus HOM05D006500 ORTHO05D008028 1.2e-45 187.6 137 69.3
VMungo0251G2572 Vigna mungo HOM05D006500 ORTHO05D008028 1.2e-45 187.6 153 63.4
GSVIVG01038143001 Vitis vinifera HOM05D006500 ORTHO05D008028 1.6e-45 187.2 146 67.1
COL.COLO4_08138 Corchorus olitorius HOM05D006500 ORTHO05D008028 2.0e-45 186.8 149 65.1
Potri.013G126900 Populus trichocarpa HOM05D006500 ORTHO05D008028 2.0e-45 186.8 158 62.7
CANSAT56G1821 Cannabis sativa HOM05D006500 ORTHO05D008028 2.7e-45 186.4 153 64.1
Phvul.003G296700 Phaseolus vulgaris HOM05D006500 ORTHO05D008028 2.7e-45 186.4 155 64.5
Atru.chr4.1419 Acer truncatum HOM05D006500 ORTHO05D008028 3.5e-45 186.0 154 64.3
Eucgr.A00110 Eucalyptus grandis HOM05D006500 ORTHO05D008028 3.5e-45 186.0 157 61.8
Eucgr.A00287 Eucalyptus grandis HOM05D006500 ORTHO05D008028 3.5e-45 186.0 157 61.8
Ca_18638_v3 Cicer arietinum L. HOM05D006500 ORTHO05D008028 4.5e-45 185.7 145 64.1
Duzib151G0460 Durio zibethinus HOM05D006500 ORTHO05D008028 4.5e-45 185.7 135 69.6
Manes.11G129200 Manihot esculenta HOM05D006500 ORTHO05D008028 4.5e-45 185.7 153 65.4
Glyma.02G137600 Glycine max HOM05D006500 ORTHO05D008028 5.9e-45 185.3 152 62.5
Lalb_Chr09g0328101 Lupinus albus HOM05D006500 ORTHO05D008028 5.9e-45 185.3 154 64.3
arahy.Tifrunner.gnm1.ann1.A3K5YX Arachis hypogaea HOM05D006500 ORTHO05D008028 7.8e-45 184.9 149 63.1
arahy.Tifrunner.gnm1.ann1.SHKR8E Arachis hypogaea HOM05D006500 ORTHO05D008028 7.8e-45 184.9 149 63.1
RcHm_v2.0_Chr4g0405941 Rosa chinensis HOM05D006500 ORTHO05D008028 7.8e-45 184.9 150 62.7
Nn1g09644 Nelumbo nucifera HOM05D006500 ORTHO05D008028 1.7e-44 183.7 150 66.7
Hund03202 Selenicereus undatus HOM05D006500 ORTHO05D008028 2.9e-44 183.0 158 62.0
TWI38G1400 Tripterygium wilfordii HOM05D006500 ORTHO05D008028 2.9e-44 183.0 149 63.8
Carub.0001s0507 Capsella rubella HOM05D006500 ORTHO05D008028 3.8e-44 182.6 147 63.3
SGA_v2.0_scaffold283G46959 Striga asiatica HOM05D006500 ORTHO05D008028 3.8e-44 182.6 146 63.7
TAR365G1104 Trochodendron aralioides HOM05D006500 ORTHO05D008028 8.6e-44 181.4 155 63.9
BcaC07g42119 Brassica carinata HOM05D006500 ORTHO05D008028 1.5e-43 180.6 149 61.7
Lj3A158T10 Lonicera japonica HOM05D006500 ORTHO05D008028 1.5e-43 180.6 159 61.6
Sp1g04540 Schrenkiella parvula HOM05D006500 ORTHO05D008028 1.5e-43 180.6 138 65.2
Thhalv10008926m.g Eutrema salsugineum HOM05D006500 ORTHO05D008028 1.9e-43 180.3 138 64.5
MSTRG.4301 Avicennia marina HOM05D006500 ORTHO05D008028 2.5e-43 179.9 150 63.3
CARHR005240 Cardamine hirsuta HOM05D006500 ORTHO05D008028 2.5e-43 179.9 149 63.1
Migut.G01179 Erythranthe guttata HOM05D006500 ORTHO05D008028 2.5e-43 179.9 146 62.3
HanXRQChr14g0433631 Helianthus annuus HOM05D003327 ORTHO05D004535 2.5e-43 179.9 152 63.2
BcaC07g42115 Brassica carinata HOM05D006500 ORTHO05D008028 4.3e-43 179.1 138 64.5
BcaC07g42118 Brassica carinata HOM05D006500 ORTHO05D008028 4.3e-43 179.1 138 64.5
A09p67320 Brassica napus HOM05D006500 ORTHO05D008028 4.3e-43 179.1 138 64.5
C08p51630 Brassica napus HOM05D006500 ORTHO05D008028 4.3e-43 179.1 138 64.5
BolC8t52691H Brassica oleracea HOM05D006500 ORTHO05D008028 4.3e-43 179.1 138 64.5
PSO732G0103 Papaver somniferum HOM05D006500 ORTHO05D008028 4.3e-43 179.1 147 64.6
PGR083G1262 Punica granatum HOM05D006500 ORTHO05D008028 5.6e-43 178.7 159 61.6
AL1G15630 Arabidopsis lyrata HOM05D006500 ORTHO05D008028 9.5e-43 177.9 149 60.4
AT1G05720 Arabidopsis thaliana HOM05D006500 ORTHO05D008028 9.5e-43 177.9 158 57.6
PSO675G9108 Papaver somniferum HOM05D006500 ORTHO05D008028 9.5e-43 177.9 147 63.9
SalBow3G2241 Salvia bowleyana HOM05D006500 ORTHO05D008028 9.5e-43 177.9 158 60.8
BraA09t42063Z Brassica rapa HOM05D006500 ORTHO05D008028 1.2e-42 177.6 138 63.8
CAN.G136.13 Capsicum annuum HOM05D006500 ORTHO05D008028 2.1e-42 176.8 153 62.1
DCAR_023930 Daucus carota HOM05D006500 ORTHO05D008028 3.6e-42 176.0 157 61.1
THA.LOC104800923 Tarenaya hassleriana HOM05D006500 ORTHO05D008028 3.6e-42 176.0 156 59.6
Cc03_g14120 Coffea canephora HOM05D006500 ORTHO05D008028 6.1e-42 175.3 157 61.1
Lsat_1_v5_gn_1_74920 Lactuca sativa HOM05D006500 ORTHO05D008028 6.1e-42 175.3 156 59.6
Oeu015723.1 Olea europaea HOM05D006500 ORTHO05D008028 6.1e-42 175.3 135 65.9
Solyc06g053430.4 Solanum lycopersicum HOM05D006500 ORTHO05D008028 6.1e-42 175.3 153 62.1
Sopen06g018490 Solanum pennellii HOM05D006500 ORTHO05D008028 6.1e-42 175.3 153 62.1
PGSC0003DMG400016334 Solanum tuberosum HOM05D006500 ORTHO05D008028 6.1e-42 175.3 153 62.1
AUR62023794 Chenopodium quinoa HOM05D006500 ORTHO05D008028 8.0e-42 174.9 158 60.8
FAN17G0772 Fragaria x ananassa HOM05D006500 ORTHO05D008028 8.0e-42 174.9 159 60.4
EL10Ac3g06088 Beta vulgaris HOM05D006500 ORTHO05D008028 1.0e-41 174.5 158 60.1
Sc25g0002800 Simmondsia chinensis HOM05D006500 ORTHO05D008028 1.4e-41 174.1 158 59.5
Oeu050336.1 Olea europaea HOM05D006500 ORTHO05D008028 1.8e-41 173.7 157 59.9
FAN12G2511 Fragaria x ananassa HOM05D006500 ORTHO05D008028 3.0e-41 172.9 135 65.2
BcaB03g13492 Brassica carinata HOM05D006500 ORTHO05D008028 8.9e-41 171.4 149 60.4
BcaC07g36846 Brassica carinata HOM05D006500 ORTHO05D008028 1.5e-40 170.6 138 63.0
C08p02210 Brassica napus HOM05D006500 ORTHO05D008028 1.5e-40 170.6 138 63.0
BolC8t47013H Brassica oleracea HOM05D006500 ORTHO05D008028 1.5e-40 170.6 138 63.0
AUR62002395 Chenopodium quinoa HOM05D006500 ORTHO05D008028 1.5e-40 170.6 158 60.1
HPP92_003580 Vanilla planifolia HOM05D006500 ORTHO05D008028 2.0e-40 170.2 156 56.4
FvH4_4g10450 Fragaria vesca HOM05D006500 ORTHO05D008028 2.6e-40 169.9 156 59.6
Nitab4.5_0001586g0010 Nicotiana tabacum HOM05D006500 ORTHO05D008028 2.6e-40 169.9 155 57.4
Peaxi162Scf00180g00116 Petunia axillaris HOM05D006500 ORTHO05D008028 4.4e-40 169.1 150 57.3
A08p36310 Brassica napus HOM05D006500 ORTHO05D008028 5.8e-40 168.7 138 61.6
BraA08t35535Z Brassica rapa HOM05D006500 ORTHO05D008028 5.8e-40 168.7 138 61.6
CDE04G3295 Ceratophyllum demersum HOM05D006500 ORTHO05D008028 2.9e-39 166.4 147 57.8
ATR0743G133 Amborella trichopoda HOM05D006500 ORTHO05D008028 6.4e-39 165.2 156 55.1
ECA248G2222 Erigeron canadensis HOM05D000003 ORTHO05D008028 1.1e-38 164.5 135 61.5
Nitab4.5_0002544g0040 Nicotiana tabacum HOM05D006500 ORTHO05D008028 2.4e-38 163.3 155 55.5
Os01g0894500 Oryza sativa ssp. japonica HOM05D006500 ORTHO05D008028 2.0e-37 160.2 160 54.4
FAN22G1805 Fragaria x ananassa HOM05D006500 ORTHO05D008028 5.0e-36 155.6 206 46.1
Zm00001eb144900 Zea mays HOM05D006500 ORTHO05D008028 6.6e-36 155.2 156 52.6
FAN07G0402 Fragaria x ananassa HOM05D006500 ORTHO05D008028 8.6e-36 154.8 203 47.3
FAN12G1276 Fragaria x ananassa HOM05D006500 ORTHO05D008028 1.1e-35 154.5 187 47.6
Aa31LG1G8630 Aethionema arabicum HOM05D006500 ORTHO05D008028 4.7e-34 149.1 150 54.0
SEGI_07767 Sequoiadendron giganteum HOM05D006500 ORTHO05D008028 3.1e-33 146.4 135 55.6
unitig_46.g18636 Utricularia gibba HOM05D006500 ORTHO05D008028 4.0e-33 146.0 157 49.0
TPR.G23526 Trifolium pratense HOM05D006500 ORTHO05D008028 1.2e-29 134.4 99 68.7
BcaC07g42121 Brassica carinata HOM05D006500 ORTHO05D008028 2.3e-28 130.2 110 60.9
Pp3c14_2450 Physcomitrium patens HOM05D006500 ORTHO05D008028 1.5e-27 127.5 162 44.4
SMO119G0117 Selaginella moellendorffii HOM05D006500 ORTHO05D008028 5.6e-27 125.6 132 47.7
MBI08_g33171_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 9.5e-27 124.8 99 63.6
Nn1g09666 Nelumbo nucifera HOM05D006500 ORTHO05D008028 1.4e-22 110.9 60 88.3
SHI33478 Sapria himalayana HOM05D000105 ORTHO05D000023 1.8e-17 94.0 102 48.0
Ciclev10023175m.g Citrus clementina HOM05D006500 ORTHO05D008028 1.0e-12 78.2 50 74.0
CBR_g27901 Chara braunii HOM05D006500 ORTHO05D008028 1.6e-10 70.9 146 30.8
CAN.G701.5 Capsicum annuum HOM05D006500 ORTHO05D008028 3.1e-09 66.6 57 57.9
MBI08_g33170_MAGBIO Magnolia biondii HOM05D006500 ORTHO05D008028 1.9e-06 57.4 52 59.6


User provided reference genes

Program Settings