Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01332 Corylus avellana HOM05D007634 ORTHO05D004310 1.1e-102 377.1 255 100.0
Haze_01337 Corylus avellana HOM05D007634 ORTHO05D004310 9.1e-102 374.0 255 99.6
Cfa015285 Carpinus fangiana HOM05D007634 ORTHO05D004310 6.7e-97 357.8 255 95.7
CiPaw.02G072900 Carya illinoinensis HOM05D007634 ORTHO05D004310 7.5e-56 221.5 256 71.5
QL06p012814 Quercus lobata HOM05D007634 ORTHO05D004310 2.8e-50 203.0 238 71.8
Prupe.1G113900 Prunus persica HOM05D007634 ORTHO05D004310 2.2e-47 193.4 255 64.3
CiPaw.01G136100 Carya illinoinensis HOM05D007634 ORTHO05D004310 2.7e-45 186.4 256 66.0
MD13G1149900 Malus domestica HOM05D007634 ORTHO05D004310 7.3e-43 178.3 255 62.0
MD16G1150300 Malus domestica HOM05D007634 ORTHO05D004310 9.6e-43 177.9 255 60.4
RcHm_v2.0_Chr4g0425851 Rosa chinensis HOM05D007634 ORTHO05D004310 1.1e-41 174.5 253 59.7
FAN12G0129 Fragaria x ananassa HOM05D007634 ORTHO05D004310 1.5e-40 170.6 253 58.1
FAN07G0504 Fragaria x ananassa HOM05D007634 ORTHO05D004310 5.8e-40 168.7 253 58.5
FvH4_4g20190 Fragaria vesca HOM05D007634 ORTHO05D004310 1.3e-39 167.5 253 58.1
TWI09G0962 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 6.9e-33 145.2 253 57.7
CANSAT78G1884 Cannabis sativa HOM05D007634 ORTHO05D004310 1.2e-32 144.4 257 59.9
Ciclev10005745m.g Citrus clementina HOM05D007634 ORTHO05D004310 5.8e-32 142.1 254 59.8
TAR362G0031 Trochodendron aralioides HOM05D007634 ORTHO05D004310 5.8e-32 142.1 257 56.4
TAR365G0785 Trochodendron aralioides HOM05D007634 ORTHO05D004310 3.8e-31 139.4 236 61.4
Manes.15G001900 Manihot esculenta HOM05D007634 ORTHO05D004310 1.1e-30 137.9 244 60.7
Potri.010G148200 Populus trichocarpa HOM05D007634 ORTHO05D004310 1.9e-30 137.1 244 57.0
Lalb_Chr18g0058621 Lupinus albus HOM05D007634 ORTHO05D004310 3.2e-30 136.3 256 56.2
VMungo0540G1967 Vigna mungo HOM05D007634 ORTHO05D004310 5.4e-30 135.6 257 54.9
Glyma.09G033800 Glycine max HOM05D007634 ORTHO05D004310 1.0e-28 131.3 262 55.0
COL.COLO4_34582 Corchorus olitorius HOM05D007634 ORTHO05D004310 1.3e-28 131.0 262 54.6
Sabra10G0114400 Salix brachista HOM05D007634 ORTHO05D004310 1.3e-28 131.0 244 57.4
Lj6A693T64 Lonicera japonica HOM05D007634 ORTHO05D004310 2.3e-28 130.2 257 50.2
Potri.008G102700 Populus trichocarpa HOM05D007634 ORTHO05D004310 6.6e-28 128.6 241 57.3
Duzib212G0210 Durio zibethinus HOM05D007634 ORTHO05D004310 1.3e-26 124.4 249 57.4
Ca_00964_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 2.8e-26 123.2 253 55.7
Glyma.15G138500 Glycine max HOM05D007634 ORTHO05D004310 3.6e-26 122.9 233 57.9
TWI73G1001 Tripterygium wilfordii HOM05D007634 ORTHO05D004310 6.2e-26 122.1 253 56.5
Atru.chr4.3053 Acer truncatum HOM05D007634 ORTHO05D004310 8.1e-26 121.7 224 61.2
Manes.03G206900 Manihot esculenta HOM05D007634 ORTHO05D004310 2.4e-25 120.2 251 57.8
Thecc.04G304600 Theobroma cacao HOM05D007634 ORTHO05D004310 4.5e-24 115.9 253 53.0
Lalb_Chr07g0181961 Lupinus albus HOM05D007634 ORTHO05D004310 7.6e-24 115.2 229 55.0
Lalb_Chr13g0298591 Lupinus albus HOM05D007634 ORTHO05D004310 7.6e-24 115.2 256 53.9
GSVIVG01034962001 Vitis vinifera HOM05D007634 ORTHO05D004310 2.2e-23 113.6 255 48.6
TAR636G1196 Trochodendron aralioides HOM05D007634 ORTHO05D004310 4.9e-23 112.5 185 65.4
Aqoxy5G02697 Aquilegia oxysepala HOM05D009154 ORTHO05D004310 6.4e-23 112.1 261 37.5
Duzib151G0484 Durio zibethinus HOM05D007634 ORTHO05D004310 1.4e-22 110.9 256 51.2
Sabra08G0077600 Salix brachista HOM05D007634 ORTHO05D004310 3.2e-22 109.8 286 47.9
Cpa.g.sc9.28 Carica papaya HOM05D007634 ORTHO05D004310 2.1e-21 107.1 256 53.9
Psat1g162160 Pisum sativum HOM05D007634 ORTHO05D004310 2.1e-21 107.1 256 52.0
Phvul.006G119700 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 3.5e-21 106.3 248 52.8
CSS0049682 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 4.6e-21 105.9 246 52.4
Lj6g0019253 Lotus japonicus HOM05D007634 ORTHO05D004310 6.0e-21 105.5 256 53.1
Lalb_Chr15g0089131 Lupinus albus HOM05D007634 ORTHO05D004310 6.0e-21 105.5 230 55.7
Dinv44263 Davidia involucrata HOM05D007634 ORTHO05D004310 1.5e-19 100.9 198 59.6
Hma1.2p1_1400F.1_g280910 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 3.3e-19 99.8 251 52.2
Dinv15141 Davidia involucrata HOM05D007634 ORTHO05D004310 7.4e-19 98.6 185 66.5
Dinv10123 Davidia involucrata HOM05D009814 ORTHO05D004310 2.8e-18 96.7 249 51.8
Aqoxy2G02664 Aquilegia oxysepala HOM05D007634 ORTHO05D004310 8.1e-18 95.1 255 51.4
Lj3A834G63 Lonicera japonica HOM05D007634 ORTHO05D004310 1.1e-17 94.7 241 46.1
arahy.Tifrunner.gnm1.ann1.E7T2Z7 Arachis hypogaea HOM05D007634 ORTHO05D004310 1.4e-17 94.4 255 51.0
arahy.Tifrunner.gnm1.ann1.X0JG6N Arachis hypogaea HOM05D007634 ORTHO05D004310 1.4e-17 94.4 255 51.0
MBI18_g35543_MAGBIO Magnolia biondii HOM05D007634 ORTHO05D004310 1.4e-17 94.4 252 52.4
Medtr2g033650 Medicago truncatula HOM05D007634 ORTHO05D004310 2.4e-17 93.6 255 53.7
Phvul.003G116800 Phaseolus vulgaris HOM05D007634 ORTHO05D004310 6.9e-17 92.0 258 52.3
MBI19_g03266_MAGBIO Magnolia biondii HOM05D003564 ORTHO05D005332 2.0e-16 90.5 257 48.6
Psat4g021760 Pisum sativum HOM05D007634 ORTHO05D004310 2.6e-16 90.1 224 52.2
Hund03138 Selenicereus undatus HOM05D007634 ORTHO05D004310 2.6e-16 90.1 270 47.0
TPR.G33868 Trifolium pratense HOM05D007634 ORTHO05D004310 3.4e-16 89.7 258 35.7
Actinidia13348 Actinidia chinensis HOM05D007634 ORTHO05D004310 5.8e-16 89.0 237 53.6
Eucgr.H04066 Eucalyptus grandis HOM05D007634 ORTHO05D004310 7.6e-16 88.6 254 51.6
Lalb_Chr20g0120751 Lupinus albus HOM05D007634 ORTHO05D004310 1.0e-15 88.2 214 53.3
Hma1.2p1_0408F.1_g146500 Hydrangea macrophylla HOM05D009814 ORTHO05D004310 1.3e-15 87.8 251 50.6
Glyma.07G237600 Glycine max HOM05D007634 ORTHO05D004310 2.2e-15 87.0 228 53.5
Hma1.2p1_0078F.1_g039860 Hydrangea macrophylla HOM05D007634 ORTHO05D004310 2.2e-15 87.0 230 53.5
Actinidia14250 Actinidia chinensis HOM05D003564 ORTHO05D004310 3.8e-15 86.3 236 52.1
Lj4g0016207 Lotus japonicus HOM05D007634 ORTHO05D004310 3.8e-15 86.3 252 50.0
Nn3g21763 Nelumbo nucifera HOM05D007634 ORTHO05D004310 3.8e-15 86.3 205 56.6
Medtr4g122710 Medicago truncatula HOM05D007634 ORTHO05D004310 1.1e-14 84.7 216 55.1
QL12p018988 Quercus lobata HOM05D009154 ORTHO05D004310 1.4e-14 84.3 233 36.5
GSVIVG01031256001 Vitis vinifera HOM05D007634 ORTHO05D004310 5.5e-14 82.4 251 40.2
Gorai.002G031000 Gossypium raimondii HOM05D007634 ORTHO05D004310 1.2e-13 81.3 256 49.2
Gohir.D01G023562 Gossypium hirsutum HOM05D007634 ORTHO05D004310 2.7e-13 80.1 256 49.2
TPR.G25427 Trifolium pratense HOM05D007634 ORTHO05D004310 3.5e-13 79.7 217 46.1
Thecc.01G317400 Theobroma cacao HOM05D009814 ORTHO05D004310 6.0e-13 79.0 245 48.6
Ca_21412_v3 Cicer arietinum L. HOM05D007634 ORTHO05D004310 7.9e-13 78.6 239 49.0
VMungo1215G2062 Vigna mungo HOM05D007634 ORTHO05D004310 7.9e-13 78.6 248 51.2
Duzib138G1730 Durio zibethinus HOM05D009814 ORTHO05D004310 1.8e-12 77.4 260 46.5
Gohir.D09G241900 Gossypium hirsutum HOM05D007634 ORTHO05D004310 2.3e-12 77.0 256 47.7
Sc17g0000300 Simmondsia chinensis HOM05D009814 ORTHO05D004310 3.9e-12 76.3 215 54.0
Ah.07g201480 Amaranthus hybridus HOM05D007634 ORTHO05D004310 6.7e-12 75.5 203 54.2
AUR62016237 Chenopodium quinoa HOM05D007634 ORTHO05D004310 1.5e-11 74.3 255 45.9
Gohir.A01G035100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.5e-11 74.3 256 48.8
Prupe.3G008100 Prunus persica HOM05D018099 ORTHO05D020712 1.9e-11 73.9 216 34.7
COL.COLO4_23198 Corchorus olitorius HOM05D009814 ORTHO05D004310 2.5e-11 73.6 224 50.4
DCAR_026994 Daucus carota HOM05D007634 ORTHO05D004310 3.3e-11 73.2 259 37.5
PSO724G1196 Papaver somniferum HOM05D007634 ORTHO05D004310 4.3e-11 72.8 95 51.6
EL10As5g23572 Beta vulgaris HOM05D009154 ORTHO05D004310 5.7e-11 72.4 254 43.3
Ciclev10021807m.g Citrus clementina HOM05D009814 ORTHO05D004310 9.6e-11 71.6 258 43.8
Duzib211G0633 Durio zibethinus HOM05D009814 ORTHO05D004310 9.6e-11 71.6 258 41.1
Gorai.004G145000 Gossypium raimondii HOM05D009814 ORTHO05D004310 9.6e-11 71.6 256 47.3
PSO421G0073 Papaver somniferum HOM05D007634 ORTHO05D004310 9.6e-11 71.6 95 50.5
Gohir.A09G241100 Gossypium hirsutum HOM05D007634 ORTHO05D004310 1.6e-10 70.9 256 48.4
Nn4g25534 Nelumbo nucifera HOM05D009814 ORTHO05D004310 2.1e-10 70.5 228 52.2
Peaxi162Scf00228g00615 Petunia axillaris HOM05D012194 ORTHO05D015569 2.1e-10 70.5 256 41.8
Lj1C14T15 Lonicera japonica HOM05D009154 ORTHO05D004310 2.8e-10 70.1 238 31.9
AUR62039253 Chenopodium quinoa HOM05D007634 ORTHO05D004310 3.7e-10 69.7 255 45.9
DCAR_023359 Daucus carota HOM05D012194 ORTHO05D015569 3.7e-10 69.7 203 45.3
Gohir.A08G120000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 3.7e-10 69.7 237 48.5
Rhsim02G0002500 Rhododendron simsii HOM05D032642 ORTHO05D004310 3.7e-10 69.7 115 45.2
Hund11988 Selenicereus undatus HOM05D007634 ORTHO05D004310 4.8e-10 69.3 262 45.8
GSVIVG01028151001 Vitis vinifera HOM05D009814 ORTHO05D004310 4.8e-10 69.3 249 46.2
Sc13g0007130 Simmondsia chinensis HOM05D007634 ORTHO05D004310 6.3e-10 68.9 259 41.7
Actinidia16871 Actinidia chinensis HOM05D013055 ORTHO05D012930 8.2e-10 68.6 184 57.6
ATR0693G086 Amborella trichopoda HOM05D007634 ORTHO05D004310 1.4e-09 67.8 211 44.5
Gohir.D08G141000 Gossypium hirsutum HOM05D009814 ORTHO05D004310 1.4e-09 67.8 256 46.5
EL10Ac3g05537 Beta vulgaris HOM05D007634 ORTHO05D004310 3.1e-09 66.6 283 40.6
CSS0049163 Camellia sinensis var. sinensis HOM05D007634 ORTHO05D004310 3.1e-09 66.6 254 46.9
Atru.chr5.960 Acer truncatum HOM05D009814 ORTHO05D004310 4.1e-09 66.2 256 46.5
Cpa.g.sc18.87 Carica papaya HOM05D009814 ORTHO05D004310 5.3e-09 65.9 256 45.3
PSO210G0186 Papaver somniferum HOM05D058645 ORTHO05D004310 9.0e-09 65.1 223 50.2
PSO761G0298 Papaver somniferum HOM05D058645 ORTHO05D004310 1.2e-08 64.7 223 50.7
arahy.Tifrunner.gnm1.ann1.F6IICX Arachis hypogaea HOM05D007634 ORTHO05D004310 2.0e-08 63.9 256 45.3
CSS0041924 Camellia sinensis var. sinensis HOM05D015885 ORTHO05D012930 2.0e-08 63.9 208 44.2
Gohir.A10G174000 Gossypium hirsutum HOM05D032758 ORTHO05D004310 2.6e-08 63.5 220 47.7
vmacro15171 Vaccinium macrocarpon HOM05D018149 ORTHO05D020732 2.6e-08 63.5 105 44.8
arahy.Tifrunner.gnm1.ann1.NL9DLR Arachis hypogaea HOM05D007634 ORTHO05D004310 7.6e-08 62.0 258 45.7
Sp3g15340 Schrenkiella parvula HOM05D009836 ORTHO05D012041 7.6e-08 62.0 96 38.5
Gohir.D10G180500 Gossypium hirsutum HOM05D032758 ORTHO05D047072 1.7e-07 60.8 208 49.5
Cfa006724 Carpinus fangiana HOM05D013055 ORTHO05D014149 2.2e-07 60.5 218 52.3
Glyma.17G035900 Glycine max HOM05D007634 ORTHO05D004310 2.2e-07 60.5 113 40.7
CiPaw.07G030700 Carya illinoinensis HOM05D013055 ORTHO05D014149 2.9e-07 60.1 189 52.9
Gohir.A11G108100 Gossypium hirsutum HOM05D009814 ORTHO05D004310 2.9e-07 60.1 250 45.6
Aqoxy6G01340 Aquilegia oxysepala HOM05D009814 ORTHO05D004310 3.8e-07 59.7 107 40.2
Haze_04036 Corylus avellana HOM05D013055 ORTHO05D014149 3.8e-07 59.7 196 48.5
ECA236G0385 Erigeron canadensis HOM05D009154 ORTHO05D004310 5.0e-07 59.3 218 29.4
Gorai.006G265400 Gossypium raimondii HOM05D007634 ORTHO05D004310 5.0e-07 59.3 234 46.2
Gorai.011G202000 Gossypium raimondii HOM05D032758 ORTHO05D047072 5.0e-07 59.3 221 47.5
Solyc05g053360.3 Solanum lycopersicum HOM05D012194 ORTHO05D015569 5.0e-07 59.3 246 45.5
TWI36G1520 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 5.0e-07 59.3 258 45.0
AUR62011764 Chenopodium quinoa HOM05D009154 ORTHO05D004310 6.5e-07 58.9 254 27.2
Sopen05g031870 Solanum pennellii HOM05D012194 ORTHO05D015569 6.5e-07 58.9 246 45.5
Lju926C3T5 Lonicera japonica HOM05D009154 ORTHO05D004310 1.1e-06 58.2 183 38.8
Manes.05G013000 Manihot esculenta HOM05D009154 ORTHO05D004310 1.4e-06 57.8 250 30.4
Ah.13g071450 Amaranthus hybridus HOM05D007634 ORTHO05D004310 3.2e-06 56.6 246 43.5
Sopen01g023890 Solanum pennellii HOM05D000003 ORTHO05D015569 3.2e-06 56.6 201 42.8
TWI18G0583 Tripterygium wilfordii HOM05D009814 ORTHO05D004310 3.2e-06 56.6 229 45.0
MD09G1285700 Malus domestica HOM05D018099 ORTHO05D020712 4.2e-06 56.2 215 42.3
CsaV3_3G026560 Cucumis sativus L. HOM05D009154 ORTHO05D004310 7.2e-06 55.5 236 28.4
PGR004G0186 Punica granatum HOM05D007634 ORTHO05D004310 7.2e-06 55.5 92 41.3


User provided reference genes

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