Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 3.2e-40 167.9 82 100.0
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 3.2e-32 141.4 81 90.1
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 2.2e-25 118.6 80 70.0
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 1.9e-21 105.5 78 70.5
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 4.0e-19 97.8 59 72.9
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 5.3e-19 97.4 59 74.6
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 9.0e-19 96.7 67 67.2
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 9.0e-19 96.7 63 68.3
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 1.2e-18 96.3 78 60.3
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 2.0e-18 95.5 69 62.3
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 5.8e-18 94.0 66 66.7
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 1.3e-17 92.8 62 67.7
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 1.7e-17 92.4 61 70.5
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 1.7e-17 92.4 66 65.2
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 2.9e-17 91.7 67 61.2
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 2.9e-17 91.7 68 63.2
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 3.8e-17 91.3 70 60.0
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 4.9e-17 90.9 70 61.4
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 6.5e-17 90.5 78 60.3
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 6.5e-17 90.5 59 69.5
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 8.4e-17 90.1 59 67.8
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 1.1e-16 89.7 67 58.2
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.9e-16 89.0 59 66.1
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 4.2e-16 87.8 63 63.5
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 4.2e-16 87.8 70 58.6
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 5.5e-16 87.4 68 57.4
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 5.5e-16 87.4 75 57.3
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 7.1e-16 87.0 73 60.3
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 7.1e-16 87.0 59 66.1
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 7.1e-16 87.0 65 64.6
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 7.1e-16 87.0 65 64.6
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 7.1e-16 87.0 56 67.9
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 7.1e-16 87.0 70 57.1
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 1.2e-15 86.3 59 64.4
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.2e-15 86.3 61 67.2
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.2e-15 86.3 61 67.2
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 2.1e-15 85.5 59 66.1
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 3.5e-15 84.7 67 59.7
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 4.6e-15 84.3 68 58.8
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 6.0e-15 84.0 66 59.1
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 6.0e-15 84.0 59 64.4
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 1.0e-14 83.2 62 61.3
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 1.0e-14 83.2 62 61.3
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 1.0e-14 83.2 62 61.3
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 1.0e-14 83.2 62 61.3
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 1.3e-14 82.8 80 56.2
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 1.3e-14 82.8 60 66.7
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 1.8e-14 82.4 48 72.9
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 2.3e-14 82.0 59 64.4
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 2.3e-14 82.0 59 64.4
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 2.3e-14 82.0 61 60.7
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 3.9e-14 81.3 69 53.6
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 5.1e-14 80.9 67 56.7
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 5.1e-14 80.9 70 57.1
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 1.1e-13 79.7 69 53.6
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 1.1e-13 79.7 55 69.1
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 1.5e-13 79.3 50 68.0
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 3.3e-13 78.2 64 56.2
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 4.3e-13 77.8 61 57.4
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 4.3e-13 77.8 58 56.9
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 5.7e-13 77.4 58 60.3
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 7.4e-13 77.0 62 56.5
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 7.4e-13 77.0 64 53.1
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 1.3e-12 76.3 79 50.6
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 1.3e-12 76.3 57 61.4
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 1.6e-12 75.9 68 54.4
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.1e-12 75.5 59 57.6
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 2.8e-12 75.1 59 61.0
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 3.7e-12 74.7 63 57.1
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 4.8e-12 74.3 51 66.7
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 4.8e-12 74.3 64 53.1
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 6.2e-12 73.9 66 56.1
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 8.2e-12 73.6 61 54.1
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 1.1e-11 73.2 58 53.4
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.1e-11 73.2 59 55.9
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 1.1e-11 73.2 59 59.3
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 1.4e-11 72.8 68 47.1
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 1.4e-11 72.8 52 61.5
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 3.1e-11 71.6 47 66.0
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 3.1e-11 71.6 59 54.2
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 4.0e-11 71.2 66 53.0
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 4.0e-11 71.2 65 50.8
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 6.9e-11 70.5 52 53.8
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 9.0e-11 70.1 66 53.0
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 1.5e-10 69.3 53 58.5
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 2.0e-10 68.9 67 53.7
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 4.5e-10 67.8 41 65.9
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 1.0e-09 66.6 59 55.9
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 1.7e-09 65.9 59 52.5
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 5.0e-09 64.3 48 58.3
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 6.5e-09 63.9 48 56.2
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 8.4e-09 63.5 45 62.2
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.4e-08 62.8 55 50.9
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 4.2e-08 61.2 60 50.0
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 2.1e-07 58.9 42 61.9
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 2.1e-07 58.9 55 45.5
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 3.5e-07 58.2 45 51.1
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.0e-06 56.6 44 56.8
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 1.8e-06 55.8 51 41.2


User provided reference genes

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