Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01246 Corylus avellana HOM05D005803 ORTHO05D008090 0.0e+00 1177.5 600 100.0
Cfa015360 Carpinus fangiana HOM05D005803 ORTHO05D008090 4.6e-306 1053.9 600 91.5
QL06p007721 Quercus lobata HOM05D005803 ORTHO05D008090 8.8e-281 969.9 599 84.0
CiPaw.01G151500 Carya illinoinensis HOM05D005803 ORTHO05D008090 6.8e-273 943.7 600 82.8
CsaV3_6G017350 Cucumis sativus L. HOM05D005803 ORTHO05D008090 3.1e-270 934.9 600 80.7
Ciclev10004654m.g Citrus clementina HOM05D005803 ORTHO05D008090 5.9e-269 930.6 601 80.0
GSVIVG01017783001 Vitis vinifera HOM05D005803 ORTHO05D008090 2.3e-268 928.7 600 79.7
Thecc.04G279700 Theobroma cacao HOM05D005803 ORTHO05D008090 4.2e-267 924.5 601 80.0
Gohir.A10G161600 Gossypium hirsutum HOM05D005803 ORTHO05D008090 4.0e-265 917.9 601 79.9
TWI09G0274 Tripterygium wilfordii HOM05D005803 ORTHO05D008090 1.3e-263 912.9 602 79.6
Potri.008G215100 Populus trichocarpa HOM05D005803 ORTHO05D008090 2.8e-263 911.8 600 79.8
RcHm_v2.0_Chr4g0421441 Rosa chinensis HOM05D005803 ORTHO05D008090 4.9e-263 911.0 600 79.5
Sabra08G0155700 Salix brachista HOM05D005803 ORTHO05D008090 2.4e-262 908.7 600 79.3
Lj6g0003207 Lotus japonicus HOM05D005803 ORTHO05D008090 7.0e-262 907.1 600 78.2
Manes.15G015300 Manihot esculenta HOM05D005803 ORTHO05D008090 7.0e-262 907.1 600 79.3
Prupe.1G140200 Prunus persica HOM05D005803 ORTHO05D008090 2.0e-261 905.6 600 78.7
Gorai.011G187600 Gossypium raimondii HOM05D005803 ORTHO05D008090 2.7e-261 905.2 601 78.9
Psat1g187960 Pisum sativum HOM05D005803 ORTHO05D008090 4.5e-261 904.4 581 79.7
Hma1.2p1_0698F.1_g205430 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 5.9e-261 904.0 600 78.3
CSS0017376 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 1.0e-260 903.3 601 78.2
CSS0035312 Camellia sinensis var. sinensis HOM05D005803 ORTHO05D008090 1.0e-260 903.3 601 78.2
ClCG06G005310 Citrullus lanatus HOM05D005803 ORTHO05D008090 2.3e-260 902.1 665 73.2
Potri.010G022100 Populus trichocarpa HOM05D005803 ORTHO05D008090 5.0e-260 901.0 600 78.7
PGR031G1735 Punica granatum HOM05D005803 ORTHO05D008090 1.2e-258 896.3 601 76.7
Glyma.15G096000 Glycine max HOM05D005803 ORTHO05D008090 8.0e-258 893.6 600 77.8
VMungo0540G0998 Vigna mungo HOM05D005803 ORTHO05D008090 1.5e-256 889.4 600 77.8
Glyma.13G216500 Glycine max HOM05D005803 ORTHO05D008090 2.6e-256 888.6 600 77.5
Sed0014775 Sechium edule HOM05D005803 ORTHO05D008090 2.6e-256 888.6 600 77.7
Lalb_Chr18g0055621 Lupinus albus HOM05D005803 ORTHO05D008090 5.7e-256 887.5 600 76.5
MD16G1173300 Malus domestica HOM05D005803 ORTHO05D008090 5.7e-256 887.5 601 77.4
Phvul.006G162900 Phaseolus vulgaris HOM05D005803 ORTHO05D008090 1.2e-253 879.8 600 75.7
Sopen01g029400 Solanum pennellii HOM05D005803 ORTHO05D008090 1.2e-253 879.8 601 75.0
Dinv44408 Davidia involucrata HOM05D005803 ORTHO05D008090 1.3e-252 876.3 600 76.0
Ca_00559_v3 Cicer arietinum L. HOM05D005803 ORTHO05D008090 2.5e-251 872.1 600 75.7
MD13G1171800 Malus domestica HOM05D005803 ORTHO05D008090 2.5e-251 872.1 601 76.4
Peaxi162Scf00386g00615 Petunia axillaris HOM05D005803 ORTHO05D008090 3.3e-251 871.7 601 75.9
Duzib151G0664 Durio zibethinus HOM05D005803 ORTHO05D008090 5.6e-251 870.9 601 77.5
Sc19g0005000 Simmondsia chinensis HOM05D005803 ORTHO05D008090 3.6e-250 868.2 601 74.5
CAN.G223.20 Capsicum annuum HOM05D005803 ORTHO05D008090 4.7e-250 867.8 581 76.4
Gohir.D10G168100 Gossypium hirsutum HOM05D005803 ORTHO05D008090 1.4e-249 866.3 601 76.7
FAN12G0977 Fragaria x ananassa HOM05D005803 ORTHO05D008090 2.3e-249 865.5 577 78.5
FAN07G1352 Fragaria x ananassa HOM05D005803 ORTHO05D008090 6.8e-249 864.0 585 77.6
CANSAT78G2259 Cannabis sativa HOM05D005803 ORTHO05D008090 7.5e-248 860.5 600 76.5
arahy.Tifrunner.gnm1.ann1.7QB25Q Arachis hypogaea HOM05D005803 ORTHO05D008090 1.3e-247 859.8 600 74.7
arahy.Tifrunner.gnm1.ann1.FSUI8I Arachis hypogaea HOM05D005803 ORTHO05D008090 1.3e-247 859.8 600 74.7
Nn3g21354 Nelumbo nucifera HOM05D005803 ORTHO05D008090 4.9e-247 857.8 601 74.5
Actinidia40241 Actinidia chinensis HOM05D005803 ORTHO05D008090 1.4e-246 856.3 596 75.0
FAN12G3070 Fragaria x ananassa HOM05D005803 ORTHO05D008090 1.4e-246 856.3 580 77.8
Atru.chr4.2785 Acer truncatum HOM05D005803 ORTHO05D008090 4.6e-245 851.3 554 79.4
Cpa.g.sc1214.2 Carica papaya HOM05D005803 ORTHO05D008090 5.0e-244 847.8 601 75.7
TAR365G0996 Trochodendron aralioides HOM05D005803 ORTHO05D008090 6.6e-244 847.4 581 76.4
THA.LOC104820247 Tarenaya hassleriana HOM05D005803 ORTHO05D008090 5.6e-243 844.3 600 73.8
Eucgr.B01277 Eucalyptus grandis HOM05D005803 ORTHO05D008090 9.5e-243 843.6 601 72.7
FAN22G2255 Fragaria x ananassa HOM05D005803 ORTHO05D008090 4.9e-239 831.2 566 77.7
DCAR_027096 Daucus carota HOM05D005803 ORTHO05D008090 8.3e-239 830.5 615 72.2
MELO3C021349.2 Cucumis melo HOM05D005803 ORTHO05D008090 3.2e-238 828.6 687 66.8
Rhsim04G0218200 Rhododendron simsii HOM05D005803 ORTHO05D008090 4.1e-238 828.2 652 69.6
Lsat_1_v5_gn_5_69681 Lactuca sativa HOM05D005803 ORTHO05D008090 4.6e-237 824.7 600 71.3
FvH4_4g17530 Fragaria vesca HOM05D005803 ORTHO05D008090 1.7e-236 822.8 552 77.5
MSTRG.3937 Avicennia marina HOM05D005803 ORTHO05D008090 3.3e-235 818.5 604 71.2
EL10Ac3g06553 Beta vulgaris HOM05D005803 ORTHO05D008090 3.3e-235 818.5 601 70.4
Cc03_g02160 Coffea canephora HOM05D005803 ORTHO05D008090 8.1e-234 813.9 599 71.8
Aqoxy5G00678 Aquilegia oxysepala HOM05D005803 ORTHO05D008090 9.9e-232 807.0 578 72.3
HanXRQChr13g0410111 Helianthus annuus HOM05D005803 ORTHO05D008090 9.9e-232 807.0 600 70.5
Medtr2g019850 Medicago truncatula HOM05D005803 ORTHO05D008090 3.2e-230 802.0 581 72.1
BcaB02g09144 Brassica carinata HOM05D005803 ORTHO05D008090 2.7e-229 798.9 600 71.0
Nitab4.5_0000644g0090 Nicotiana tabacum HOM05D005803 ORTHO05D008090 3.5e-229 798.5 615 70.1
A05p07190 Brassica napus HOM05D005803 ORTHO05D008090 1.7e-228 796.2 601 70.9
BraA05t19684Z Brassica rapa HOM05D005803 ORTHO05D008090 1.7e-228 796.2 601 70.9
Migut.G00189 Erythranthe guttata HOM05D005803 ORTHO05D008090 1.7e-228 796.2 605 68.6
Carub.0004s2114 Capsella rubella HOM05D005803 ORTHO05D008090 3.0e-228 795.4 600 70.8
Sp4g21440 Schrenkiella parvula HOM05D005803 ORTHO05D008090 3.0e-228 795.4 600 70.5
AT2G39090 Arabidopsis thaliana HOM05D005803 ORTHO05D008090 1.9e-227 792.7 600 70.3
Lj6C671G13 Lonicera japonica HOM05D005803 ORTHO05D008090 2.1e-226 789.3 553 74.0
Aa31LG5G20510 Aethionema arabicum HOM05D005803 ORTHO05D008090 6.2e-226 787.7 600 70.5
BcaC02g12039 Brassica carinata HOM05D005803 ORTHO05D008090 1.2e-224 783.5 600 69.8
C04p08600 Brassica napus HOM05D005803 ORTHO05D008090 2.9e-223 778.9 601 69.7
BolC4t22455H Brassica oleracea HOM05D005803 ORTHO05D008090 2.9e-223 778.9 600 69.7
HPP92_015179 Vanilla planifolia HOM05D005803 ORTHO05D008090 1.4e-222 776.5 600 68.2
Ah.13g074480 Amaranthus hybridus HOM05D005803 ORTHO05D008090 2.4e-222 775.8 585 70.1
Thhalv10017916m.g Eutrema salsugineum HOM05D005803 ORTHO05D008090 5.4e-222 774.6 571 72.0
CARHR133850 Cardamine hirsuta HOM05D005803 ORTHO05D008090 4.6e-221 771.5 601 69.1
COL.COLO4_13910 Corchorus olitorius HOM05D005803 ORTHO05D008090 3.9e-220 768.5 551 73.3
PSO832G0201 Papaver somniferum HOM05D005803 ORTHO05D008090 6.6e-220 767.7 601 67.1
ATR0706G085 Amborella trichopoda HOM05D005803 ORTHO05D008090 1.5e-219 766.5 601 65.4
AL4G36390 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 9.6e-219 763.8 600 69.2
PSO210G1989 Papaver somniferum HOM05D005803 ORTHO05D008090 6.9e-217 757.7 601 66.6
MBI19_g01944_MAGBIO Magnolia biondii HOM05D005803 ORTHO05D008090 8.7e-212 740.7 572 68.9
vmacro22476 Vaccinium macrocarpon HOM05D005803 ORTHO05D008090 1.1e-203 713.8 634 64.4
SGA_v2.0_scaffold57G20231 Striga asiatica HOM05D005803 ORTHO05D008090 4.2e-198 695.3 515 70.7
Hma1.2p1_0698F.1_g205440 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 1.3e-183 647.1 432 78.5
unitig_26.g9058 Utricularia gibba HOM05D005803 ORTHO05D008090 9.7e-179 630.9 494 65.4
Os05g0149900 Oryza sativa ssp. japonica HOM05D005803 ORTHO05D008090 2.3e-172 609.8 472 66.3
AUR62042651 Chenopodium quinoa HOM05D005803 ORTHO05D008090 4.1e-169 599.0 593 56.8
Pp3c23_6980 Physcomitrium patens HOM05D005803 ORTHO05D008090 5.3e-169 598.6 601 53.6
Mapoly0073s0077 Marchantia polymorpha HOM05D005803 ORTHO05D008090 3.8e-167 592.4 602 53.7
SMO119G0467 Selaginella moellendorffii HOM05D005803 ORTHO05D008090 5.7e-163 578.6 608 52.0
AagrBONN_evm.TU.Sc2ySwM_228.1968 Anthoceros agrestis HOM05D005803 ORTHO05D008090 1.0e-156 557.8 602 50.7
CBR_g37168 Chara braunii HOM05D005803 ORTHO05D000048 1.0e-151 541.2 610 47.9
Nitab4.5_0000829g0230 Nicotiana tabacum HOM05D005803 ORTHO05D008090 4.4e-147 525.8 378 74.6
AUR62043505 Chenopodium quinoa HOM05D005803 ORTHO05D008090 1.7e-146 523.9 421 66.0
BcaNung07183 Brassica carinata HOM05D005803 ORTHO05D008090 3.1e-145 519.6 562 56.6
TPR.G1478 Trifolium pratense HOM05D005803 ORTHO05D008090 4.7e-141 505.8 286 90.6
CDE06G0920 Ceratophyllum demersum HOM05D005803 ORTHO05D008090 3.5e-128 463.0 388 64.2
ECA240G2219 Erigeron canadensis HOM05D005803 ORTHO05D008090 3.3e-126 456.4 379 61.5
Zm00001eb418180 Zea mays HOM05D005803 ORTHO05D008090 6.4e-122 442.2 395 55.4
TPR.G35525 Trifolium pratense HOM05D005803 ORTHO05D008090 2.0e-115 420.6 259 78.8
MCO16G459 Micromonas commoda HOM05D005803 ORTHO05D008090 1.5e-83 314.7 588 35.7
Solyc01g067490.4 Solanum lycopersicum HOM05D005803 ORTHO05D008090 1.0e-74 285.4 198 72.2
Oeu029260.1 Olea europaea HOM05D005803 ORTHO05D008090 5.0e-74 283.1 208 74.5
ECA240G4135 Erigeron canadensis HOM05D005803 ORTHO05D008090 6.1e-64 249.6 196 71.4
Oeu032270.1 Olea europaea HOM05D005803 ORTHO05D008090 3.1e-60 237.3 183 64.5
Hma1.2p1_2251F.1_g318140 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 4.4e-54 216.9 130 81.5
TPR.G29244 Trifolium pratense HOM05D005803 ORTHO05D008090 9.7e-54 215.7 161 70.2
SEGI_31260 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 2.8e-53 214.2 221 49.8
TPR.G29241 Trifolium pratense HOM05D005803 ORTHO05D008090 4.9e-37 160.2 93 76.3
BcaC07g41552 Brassica carinata HOM05D000238 ORTHO05D020090 4.5e-35 153.7 180 51.7
BcaC09g48072 Brassica carinata HOM05D005803 ORTHO05D020090 1.9e-33 148.3 178 50.6
C06p17250 Brassica napus HOM05D005803 ORTHO05D020090 2.8e-32 144.4 158 54.4
BolC6t36924H Brassica oleracea HOM05D005803 ORTHO05D020090 2.8e-32 144.4 158 54.4
Hma1.2p1_0055F.1_g031500 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 2.0e-30 138.3 84 78.6
AL92U10050 Arabidopsis lyrata HOM05D005803 ORTHO05D008090 3.4e-30 137.5 130 60.8
C04p44010 Brassica napus HOM05D005803 ORTHO05D020090 3.5e-27 127.5 167 48.5
Hma1.2p1_2251F.1_g318130 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 6.1e-24 116.7 129 51.2
SEGI_25333 Sequoiadendron giganteum HOM05D005803 ORTHO05D020090 6.1e-24 116.7 77 71.4
BcaC08g44302 Brassica carinata HOM05D005803 ORTHO05D020090 1.5e-22 112.1 58 93.1
Atru.chr4.2782 Acer truncatum HOM05D005803 ORTHO05D008090 3.2e-20 104.4 87 66.7
Hma1.2p1_1012F.1_g247600 Hydrangea macrophylla HOM05D005803 ORTHO05D008090 5.6e-17 93.6 84 59.5
SEGI_29512 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 2.0e-14 85.1 77 55.8
SEGI_04834 Sequoiadendron giganteum HOM05D005803 ORTHO05D008090 7.6e-06 56.6 47 48.9


User provided reference genes

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