Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 2.2e-63 245.4 117 100.0
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 3.6e-37 158.3 77 98.7
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 1.3e-31 139.8 82 80.5
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 1.7e-31 139.4 81 81.5
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.7e-31 139.4 81 79.0
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.3e-31 139.0 81 80.2
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 2.9e-31 138.7 84 76.2
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 3.8e-31 138.3 77 81.8
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 5.0e-31 137.9 81 79.0
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.1e-30 136.7 83 75.9
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 1.9e-30 136.0 77 83.1
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 1.9e-30 136.0 82 75.6
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 1.9e-30 136.0 77 84.4
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 1.9e-30 136.0 77 81.8
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 3.3e-30 135.2 82 74.4
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 4.3e-30 134.8 82 74.4
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.3e-30 134.8 82 74.4
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 5.6e-30 134.4 82 76.8
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 5.6e-30 134.4 82 75.6
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 7.3e-30 134.0 77 79.2
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 7.3e-30 134.0 77 79.2
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 9.5e-30 133.7 81 74.1
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 9.5e-30 133.7 81 76.5
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 9.5e-30 133.7 82 73.2
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 1.2e-29 133.3 76 80.3
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 1.2e-29 133.3 81 76.5
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.6e-29 132.9 81 77.8
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 1.6e-29 132.9 81 76.5
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 1.6e-29 132.9 77 79.2
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.1e-29 132.5 82 73.2
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 2.1e-29 132.5 85 71.8
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 2.1e-29 132.5 77 80.5
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 2.1e-29 132.5 83 68.7
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 3.6e-29 131.7 77 79.2
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 3.6e-29 131.7 83 72.3
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 3.6e-29 131.7 81 74.1
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 4.7e-29 131.3 77 79.2
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 4.7e-29 131.3 83 72.3
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 8.0e-29 130.6 77 74.0
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.8e-28 129.4 77 75.3
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 3.0e-28 128.6 76 75.0
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 4.0e-28 128.3 81 71.6
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 5.2e-28 127.9 83 71.1
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 5.2e-28 127.9 75 76.0
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 6.8e-28 127.5 77 75.3
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 6.8e-28 127.5 81 71.6
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 8.9e-28 127.1 77 75.3
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 1.2e-27 126.7 83 71.1
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.2e-27 126.7 83 69.9
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.2e-27 126.7 83 69.9
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 1.5e-27 126.3 83 71.1
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 2.0e-27 125.9 83 68.7
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 2.6e-27 125.6 83 68.7
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 3.4e-27 125.2 81 71.6
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 3.4e-27 125.2 77 72.7
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 4.4e-27 124.8 81 70.4
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 5.8e-27 124.4 83 68.7
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 7.5e-27 124.0 75 74.7
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 7.5e-27 124.0 77 70.1
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 9.8e-27 123.6 82 67.1
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 1.3e-26 123.2 83 66.3
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 1.7e-26 122.9 83 67.5
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 1.7e-26 122.9 77 72.7
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 2.2e-26 122.5 81 69.1
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 2.2e-26 122.5 77 72.7
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 8.3e-26 120.6 83 66.3
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 8.3e-26 120.6 77 67.5
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 8.3e-26 120.6 75 70.7
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 1.1e-25 120.2 77 71.4
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 1.1e-25 120.2 81 66.7
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 1.9e-25 119.4 77 67.5
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 3.2e-25 118.6 76 71.1
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 3.2e-25 118.6 83 67.5
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 4.1e-25 118.2 76 71.1
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 5.4e-25 117.9 83 65.1
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.2e-24 116.7 82 59.8
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 2.7e-24 115.5 78 67.9
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 3.5e-24 115.2 76 67.1
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 7.8e-24 114.0 77 71.4
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 7.8e-24 114.0 76 67.1
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 7.8e-24 114.0 83 62.7
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 7.8e-24 114.0 77 63.6
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 1.0e-23 113.6 83 61.4
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 1.3e-23 113.2 83 61.4
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 1.3e-23 113.2 83 61.4
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.7e-23 112.8 82 57.3
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 2.3e-23 112.5 83 61.4
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 2.3e-23 112.5 83 61.4
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 2.3e-23 112.5 83 61.4
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 3.0e-23 112.1 83 63.9
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 3.9e-23 111.7 83 61.4
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 3.9e-23 111.7 83 61.4
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 1.1e-22 110.2 83 60.2
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-22 110.2 83 60.2
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 1.1e-22 110.2 83 60.2
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 1.1e-22 110.2 83 61.4
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 1.9e-22 109.4 83 61.4
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 1.9e-22 109.4 83 60.2
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 2.5e-22 109.0 83 60.2
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 2.5e-22 109.0 83 60.2
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.2e-21 106.7 67 71.6
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 2.1e-21 105.9 77 68.8
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 2.8e-21 105.5 56 85.7
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 5.2e-20 101.3 78 60.3
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 8.9e-20 100.5 79 55.7
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.5e-19 99.8 81 51.9
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 8.3e-18 94.0 94 47.9
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 1.1e-17 93.6 65 63.1
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 1.1e-17 93.6 65 63.1
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 4.6e-16 88.2 55 74.5
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 1.7e-15 86.3 78 56.4
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 5.6e-14 81.3 75 52.0
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 9.5e-14 80.5 83 42.2
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 5.8e-11 71.2 83 37.3
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 7.5e-11 70.9 69 50.7
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 9.9e-11 70.5 73 49.3
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 1.0e-07 60.5 68 42.6
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 1.7e-07 59.7 73 35.6
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 1.9e-06 56.2 89 41.6


User provided reference genes

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