Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01151 Corylus avellana HOM05D005806 ORTHO05D007119 2.6e-225 785.4 512 100.0
Cfa015433 Carpinus fangiana HOM05D005806 ORTHO05D007119 2.0e-204 716.1 512 88.9
CiPaw.01G145000 Carya illinoinensis HOM05D005806 ORTHO05D007119 5.4e-162 575.1 469 75.3
QL06p010760 Quercus lobata HOM05D005806 ORTHO05D007119 4.7e-158 562.0 522 73.4
Manes.15G010100 Manihot esculenta HOM05D005806 ORTHO05D007119 5.3e-133 478.8 472 64.8
Manes.03G199200 Manihot esculenta HOM05D005806 ORTHO05D007119 1.3e-131 474.2 473 65.8
TWI09G1342 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 3.9e-128 462.6 472 60.8
Ciclev10004804m.g Citrus clementina HOM05D005806 ORTHO05D007119 2.6e-124 449.9 480 65.0
ClCG05G006280 Citrullus lanatus HOM05D005806 ORTHO05D007119 1.7e-123 447.2 479 58.0
Sed0007282 Sechium edule HOM05D005806 ORTHO05D007119 6.7e-120 435.3 480 62.7
COL.COLO4_13808 Corchorus olitorius HOM05D005806 ORTHO05D007119 1.1e-119 434.5 497 62.4
Cpa.g.sc50.151 Carica papaya HOM05D005806 ORTHO05D007119 2.6e-116 423.3 475 63.6
GSVIVG01035100001 Vitis vinifera HOM05D005806 ORTHO05D007119 4.5e-116 422.5 462 61.3
TWI73G0620 Tripterygium wilfordii HOM05D005806 ORTHO05D007119 4.9e-115 419.1 472 56.4
TAR365G0831 Trochodendron aralioides HOM05D005806 ORTHO05D007119 6.5e-115 418.7 478 59.0
Potri.010G007000 Populus trichocarpa HOM05D005806 ORTHO05D007119 2.7e-113 413.3 476 60.9
Eucgr.B01574 Eucalyptus grandis HOM05D005806 ORTHO05D007119 1.0e-112 411.4 480 59.2
TAR365G0056 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.0e-112 411.4 478 58.4
Atru.chr4.2914 Acer truncatum HOM05D005806 ORTHO05D007119 1.1e-111 407.9 472 55.1
RcHm_v2.0_Chr4g0423561 Rosa chinensis HOM05D005806 ORTHO05D007119 2.5e-111 406.8 498 61.0
MD16G1163000 Malus domestica HOM05D005806 ORTHO05D007119 9.6e-111 404.8 487 58.7
CSS0028282 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 3.7e-110 402.9 484 58.7
Duzib151G0580 Durio zibethinus HOM05D005806 ORTHO05D007119 4.8e-110 402.5 480 54.0
Duzib212G0552 Durio zibethinus HOM05D005806 ORTHO05D007119 1.4e-109 401.0 479 55.1
Prupe.1G130400 Prunus persica HOM05D005806 ORTHO05D007119 3.1e-109 399.8 490 59.8
Thecc.04G290100 Theobroma cacao HOM05D005806 ORTHO05D007119 3.1e-109 399.8 475 54.9
arahy.Tifrunner.gnm1.ann1.TZ6N57 Arachis hypogaea HOM05D005806 ORTHO05D007119 1.5e-108 397.5 486 54.3
Sabra10G0005700 Salix brachista HOM05D005806 ORTHO05D007119 2.6e-108 396.7 487 56.3
CSS0004144 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 7.6e-108 395.2 471 60.5
MELO3C006687.2 Cucumis melo HOM05D005806 ORTHO05D007119 7.6e-108 395.2 462 61.3
CSS0038808 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 1.7e-107 394.0 471 60.5
Gorai.011G193400 Gossypium raimondii HOM05D005806 ORTHO05D007119 3.8e-107 392.9 481 56.5
THA.LOC104802587 Tarenaya hassleriana HOM05D005806 ORTHO05D007119 1.2e-105 387.9 486 56.0
Gohir.D10G172900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 1.8e-104 384.0 481 59.7
Nn3g21558 Nelumbo nucifera HOM05D005806 ORTHO05D007119 4.3e-103 379.4 473 60.9
Dinv44345 Davidia involucrata HOM05D005806 ORTHO05D007119 2.2e-102 377.1 470 59.6
CsaV3_3G014910 Cucumis sativus L. HOM05D005806 ORTHO05D007119 5.3e-101 372.5 407 59.5
Lj3A825T23 Lonicera japonica HOM05D005806 ORTHO05D007119 1.2e-100 371.3 495 57.8
VMungo1215G2854 Vigna mungo HOM05D005806 ORTHO05D007119 4.5e-100 369.4 472 53.8
CARHR092010 Cardamine hirsuta HOM05D005806 ORTHO05D007119 2.9e-99 366.7 472 51.3
EL10Ac3g06659 Beta vulgaris HOM05D005806 ORTHO05D007119 6.5e-99 365.5 497 51.1
FAN07G1609 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.1e-98 364.8 474 53.4
Aqoxy5G00792 Aquilegia oxysepala HOM05D005806 ORTHO05D007119 1.4e-98 364.4 485 50.5
FAN12G2548 Fragaria x ananassa HOM05D005806 ORTHO05D007119 1.9e-98 364.0 478 54.6
Glyma.07G244900 Glycine max HOM05D005806 ORTHO05D007119 3.2e-98 363.2 465 52.9
FvH4_4g18770 Fragaria vesca HOM05D005806 ORTHO05D007119 4.2e-98 362.8 478 54.4
FAN12G3921 Fragaria x ananassa HOM05D005806 ORTHO05D007119 4.2e-98 362.8 478 54.4
Nitab4.5_0012392g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 2.1e-97 360.5 547 52.7
Phvul.003G107800 Phaseolus vulgaris HOM05D005806 ORTHO05D007119 3.6e-97 359.8 476 58.0
Carub.0003s1647 Capsella rubella HOM05D005806 ORTHO05D007119 4.6e-97 359.4 484 49.8
Gohir.A10G166900 Gossypium hirsutum HOM05D005806 ORTHO05D007119 6.1e-97 359.0 491 57.4
Hund20516 Selenicereus undatus HOM05D005806 ORTHO05D007119 6.1e-97 359.0 475 53.1
PGSC0003DMG400016813 Solanum tuberosum HOM05D005806 ORTHO05D007119 6.7e-96 355.5 489 50.9
Actinidia40301 Actinidia chinensis HOM05D005806 ORTHO05D007119 8.8e-96 355.1 392 57.4
PGR031G2493 Punica granatum HOM05D005806 ORTHO05D007119 1.5e-95 354.4 473 54.5
AT3G16760 Arabidopsis thaliana HOM05D005806 ORTHO05D007119 7.4e-95 352.1 473 49.5
Solyc01g066050.3 Solanum lycopersicum HOM05D005806 ORTHO05D007119 7.4e-95 352.1 518 48.3
Sp3g15010 Schrenkiella parvula HOM05D005806 ORTHO05D007119 2.2e-94 350.5 487 47.8
Ca_21476_v3 Cicer arietinum L. HOM05D005806 ORTHO05D007119 3.7e-94 349.7 468 51.3
Sc13g0003160 Simmondsia chinensis HOM05D005806 ORTHO05D007119 1.1e-93 348.2 419 55.1
Sopen01g027600 Solanum pennellii HOM05D005806 ORTHO05D007119 1.4e-93 347.8 512 49.4
Glyma.17G028900 Glycine max HOM05D005806 ORTHO05D007119 1.8e-93 347.4 467 52.5
Nitab4.5_0002215g0010 Nicotiana tabacum HOM05D005806 ORTHO05D007119 6.9e-93 345.5 493 49.1
Ah.13g074780 Amaranthus hybridus HOM05D005806 ORTHO05D007119 3.4e-92 343.2 502 49.6
Nn4g25745 Nelumbo nucifera HOM05D005806 ORTHO05D007119 5.9e-92 342.4 483 48.4
MBI18_g21793_MAGBIO Magnolia biondii HOM05D005806 ORTHO05D007119 1.0e-91 341.7 468 55.3
DCAR_002485 Daucus carota HOM05D005806 ORTHO05D007119 8.5e-91 338.6 471 48.8
CANSAT78G0145 Cannabis sativa HOM05D005806 ORTHO05D007119 1.4e-90 337.8 488 55.9
vmacro23238 Vaccinium macrocarpon HOM05D005806 ORTHO05D007119 1.4e-90 337.8 514 47.7
CAN.G14.19 Capsicum annuum HOM05D005806 ORTHO05D007119 2.5e-90 337.0 483 55.5
Lsat_1_v5_gn_6_78121 Lactuca sativa HOM05D005806 ORTHO05D007119 2.5e-90 337.0 497 50.5
HanXRQChr03g0084151 Helianthus annuus HOM05D005806 ORTHO05D007119 5.5e-90 335.9 523 48.6
FAN17G0801 Fragaria x ananassa HOM05D005806 ORTHO05D007119 7.2e-90 335.5 485 50.1
Oeu054004.1 Olea europaea HOM05D005806 ORTHO05D007119 2.1e-89 334.0 460 56.1
Lj4g0013254 Lotus japonicus HOM05D005806 ORTHO05D007119 2.7e-89 333.6 474 53.8
AUR62018055 Chenopodium quinoa HOM05D005806 ORTHO05D007119 7.9e-89 332.0 493 48.1
Cc03_g01460 Coffea canephora HOM05D005806 ORTHO05D007119 7.9e-89 332.0 524 45.0
Thhalv10020624m.g Eutrema salsugineum HOM05D005806 ORTHO05D007119 1.4e-88 331.3 467 50.3
Medtr4g120360 Medicago truncatula HOM05D005806 ORTHO05D007119 2.3e-88 330.5 471 49.3
MSTRG.10119 Avicennia marina HOM05D005806 ORTHO05D007119 6.7e-88 328.9 487 56.7
Aa31LG8G3830 Aethionema arabicum HOM05D005806 ORTHO05D007119 8.8e-88 328.6 485 47.8
BolC1t04724H Brassica oleracea HOM05D005806 ORTHO05D007119 1.1e-85 321.6 471 47.6
BraA01t03813Z Brassica rapa HOM05D005806 ORTHO05D007119 3.1e-85 320.1 469 51.4
C01p47550 Brassica napus HOM05D005806 ORTHO05D007119 1.2e-84 318.2 474 47.9
Oeu006424.1 Olea europaea HOM05D005806 ORTHO05D007119 5.9e-84 315.8 464 57.5
BcaC09g48634 Brassica carinata HOM05D005806 ORTHO05D007119 1.7e-83 314.3 471 50.7
Lalb_Chr07g0182271 Lupinus albus HOM05D005806 ORTHO05D007119 7.2e-82 308.9 469 52.0
PSO832G4515 Papaver somniferum HOM05D005806 ORTHO05D007119 2.7e-81 307.0 465 52.3
A01p37530 Brassica napus HOM05D005806 ORTHO05D007119 1.2e-79 301.6 468 48.9
PSO210G6439 Papaver somniferum HOM05D005806 ORTHO05D007119 5.7e-79 299.3 465 51.8
Psat4g025560 Pisum sativum HOM05D005806 ORTHO05D007119 4.8e-78 296.2 463 46.9
ECA240G3979 Erigeron canadensis HOM05D005806 ORTHO05D007119 4.1e-77 293.1 443 48.5
Peaxi162Scf00065g01121 Petunia axillaris HOM05D005806 ORTHO05D007119 3.5e-76 290.0 506 45.3
SGA_v2.0_scaffold91G28032 Striga asiatica HOM05D005806 ORTHO05D007119 3.6e-73 280.0 467 47.5
arahy.Tifrunner.gnm1.ann1.T7VR84 Arachis hypogaea HOM05D005806 ORTHO05D007119 1.0e-72 278.5 310 56.1
TAR362G1179 Trochodendron aralioides HOM05D005806 ORTHO05D007119 8.8e-72 275.4 348 58.3
TAR633G1904 Trochodendron aralioides HOM05D005806 ORTHO05D007119 1.5e-71 274.6 297 55.6
Migut.N00070 Erythranthe guttata HOM05D005806 ORTHO05D007119 2.6e-71 273.9 484 44.6
SalBow5G0238 Salvia bowleyana HOM05D005806 ORTHO05D007119 1.3e-70 271.6 532 47.7
Dinv29717 Davidia involucrata HOM05D005806 ORTHO05D007119 6.3e-70 269.2 292 65.1
HPP92_002231 Vanilla planifolia HOM05D005806 ORTHO05D007119 7.7e-68 262.3 413 44.6
CDE12G0749 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 1.2e-63 248.4 456 43.4
AUR62015254 Chenopodium quinoa HOM05D005806 ORTHO05D007119 7.5e-63 245.7 297 52.9
Os03g0340700 Oryza sativa ssp. japonica HOM05D005806 ORTHO05D007119 2.8e-62 243.8 474 39.2
Lalb_Chr13g0298181 Lupinus albus HOM05D005806 ORTHO05D007119 9.2e-61 238.8 246 65.4
Zm00001eb016320 Zea mays HOM05D005806 ORTHO05D007119 1.0e-56 225.3 492 42.5
MD13G1163500 Malus domestica HOM05D005806 ORTHO05D007119 1.5e-55 221.5 296 50.0
SEGI_25850 Sequoiadendron giganteum HOM05D005806 ORTHO05D007119 1.7e-54 218.0 538 35.9
CDE01G0725 Ceratophyllum demersum HOM05D005806 ORTHO05D007119 3.3e-50 203.8 470 41.3
AL3G29680 Arabidopsis lyrata HOM05D005806 ORTHO05D007119 1.8e-48 198.0 255 52.5
Rhsim04G0227400 Rhododendron simsii HOM05D005806 ORTHO05D007119 4.6e-44 183.3 392 37.2
HanXRQChr13g0413981 Helianthus annuus HOM05D005806 ORTHO05D007119 1.3e-38 165.2 158 58.2
unitig_699.g19987 Utricularia gibba HOM05D005806 ORTHO05D007119 1.1e-37 162.2 471 39.1
Dinv29718 Davidia involucrata HOM05D000037 ORTHO05D000150 3.3e-34 150.6 136 66.2
TAR633G1627 Trochodendron aralioides HOM05D005806 ORTHO05D007119 5.4e-29 133.3 129 62.0
SMO334G0099 Selaginella moellendorffii HOM05D005806 ORTHO05D007119 7.1e-29 132.9 198 42.9
CSS0010946 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 8.7e-27 125.9 72 83.3
CSS0023833 Camellia sinensis var. sinensis HOM05D005806 ORTHO05D007119 4.7e-25 120.2 72 81.9
TAR362G0821 Trochodendron aralioides HOM05D005806 ORTHO05D007119 6.4e-22 109.8 108 61.1
AagrBONN_evm.TU.Sc2ySwM_228.3483 Anthoceros agrestis HOM05D005806 ORTHO05D007119 8.4e-22 109.4 310 41.0
AUR62015253 Chenopodium quinoa HOM05D005806 ORTHO05D007119 3.2e-21 107.5 113 56.6
FvH4_5g32480 Fragaria vesca HOM05D005806 ORTHO05D007119 5.6e-18 96.7 98 63.3
HPP92_002153 Vanilla planifolia HOM05D005806 ORTHO05D007119 4.5e-15 87.0 96 49.0
Pp3c12_16600 Physcomitrium patens HOM05D005806 ORTHO05D007119 9.9e-15 85.9 301 29.6
SGA_v2.0_scaffold119G32699 Striga asiatica HOM05D005806 ORTHO05D007119 1.2e-12 79.0 158 39.2
Pp3c4_12130 Physcomitrium patens HOM05D005806 ORTHO05D007119 2.1e-12 78.2 350 30.3
CBR_g4056 Chara braunii HOM05D005806 ORTHO05D007119 1.0e-11 75.9 268 32.5
CBR_g31779 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-11 75.5 84 39.3
Mapoly0005s0119 Marchantia polymorpha HOM05D005806 ORTHO05D007119 3.3e-10 70.9 489 25.4
Nn2g15616 Nelumbo nucifera HOM05D005806 ORTHO05D007119 9.0e-08 62.8 54 59.3


User provided reference genes

Program Settings