Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01101 Corylus avellana HOM05D000196 ORTHO05D000279 4.6e-112 407.9 205 100.0
Haze_01100 Corylus avellana HOM05D000196 ORTHO05D000279 4.7e-93 344.7 180 96.1
Cfa015472 Carpinus fangiana HOM05D000196 ORTHO05D000279 6.4e-90 334.3 180 93.3
QL06p011202 Quercus lobata HOM05D000196 ORTHO05D000279 2.4e-81 305.8 184 84.2
CiPaw.01G142900 Carya illinoinensis HOM05D000196 ORTHO05D000279 2.5e-78 295.8 180 82.2
CiPaw.02G077700 Carya illinoinensis HOM05D000196 ORTHO05D000279 1.2e-72 276.9 180 76.7
Prupe.1G126400 Prunus persica HOM05D000196 ORTHO05D000279 5.8e-67 258.1 180 71.1
Thecc.04G294000 Theobroma cacao HOM05D000196 ORTHO05D000279 6.5e-66 254.6 184 68.5
Manes.15G007400 Manihot esculenta HOM05D000196 ORTHO05D000279 3.2e-65 252.3 184 68.5
Atru.chr4.2941 Acer truncatum HOM05D000196 ORTHO05D000279 7.1e-65 251.1 186 69.9
RcHm_v2.0_Chr4g0424211 Rosa chinensis HOM05D000196 ORTHO05D000279 7.9e-64 247.7 181 70.2
FvH4_4g19230 Fragaria vesca HOM05D000196 ORTHO05D000279 1.3e-63 246.9 181 70.2
FAN07G0978 Fragaria x ananassa HOM05D000196 ORTHO05D000279 3.9e-63 245.4 181 70.2
FAN12G2663 Fragaria x ananassa HOM05D000196 ORTHO05D000279 5.1e-63 245.0 181 69.6
Cpa.g.sc9.105 Carica papaya HOM05D000196 ORTHO05D000279 1.1e-62 243.8 184 68.5
Ciclev10004470m.g Citrus clementina HOM05D000196 ORTHO05D000279 4.3e-62 241.9 188 65.4
FAN12G1485 Fragaria x ananassa HOM05D000196 ORTHO05D000279 4.3e-62 241.9 181 70.2
Potri.008G213500 Populus trichocarpa HOM05D000196 ORTHO05D000279 5.7e-62 241.5 181 66.3
CANSAT78G0243 Cannabis sativa HOM05D000196 ORTHO05D000279 2.4e-60 236.1 181 66.9
MD13G1159700 Malus domestica HOM05D000196 ORTHO05D000279 4.1e-60 235.3 179 65.4
Potri.010G001000 Populus trichocarpa HOM05D000196 ORTHO05D000279 1.5e-59 233.4 185 64.9
Sabra10G0000800 Salix brachista HOM05D000196 ORTHO05D000279 7.6e-59 231.1 182 63.2
COL.COLO4_34681 Corchorus olitorius HOM05D000196 ORTHO05D000279 6.5e-58 228.0 184 65.8
MD16G1159400 Malus domestica HOM05D000196 ORTHO05D000279 1.9e-57 226.5 181 63.5
Duzib052G1099 Durio zibethinus HOM05D000196 ORTHO05D000279 4.2e-57 225.3 184 63.6
Dinv02065 Davidia involucrata HOM05D000196 ORTHO05D000279 5.5e-57 224.9 188 62.8
Glyma.07G243300 Glycine max HOM05D000196 ORTHO05D000279 5.5e-57 224.9 181 64.1
TWI53G1389 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 2.1e-56 223.0 186 63.4
Glyma.17G030600 Glycine max HOM05D000196 ORTHO05D000279 2.3e-55 219.5 181 61.9
Dinv44324 Davidia involucrata HOM05D000196 ORTHO05D000279 3.0e-55 219.2 182 63.7
Gohir.A09G235800 Gossypium hirsutum HOM05D000196 ORTHO05D000279 6.7e-55 218.0 184 62.0
TWI73G0501 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 6.7e-55 218.0 183 62.8
VMungo1215G0460 Vigna mungo HOM05D000196 ORTHO05D000279 5.7e-54 214.9 181 61.3
TWI09G1352 Tripterygium wilfordii HOM05D000196 ORTHO05D000279 1.6e-53 213.4 185 62.7
Cc03_g01230 Coffea canephora HOM05D000196 ORTHO05D000279 4.8e-53 211.8 180 62.2
Gohir.D09G236600 Gossypium hirsutum HOM05D000196 ORTHO05D000279 6.3e-53 211.5 184 60.9
Phvul.003G110100 Phaseolus vulgaris HOM05D000196 ORTHO05D000279 6.3e-53 211.5 181 60.2
Gohir.D10G175500 Gossypium hirsutum HOM05D000196 ORTHO05D000279 1.8e-52 209.9 189 60.8
Gorai.006G259700 Gossypium raimondii HOM05D000196 ORTHO05D000279 2.4e-52 209.5 184 60.3
Lj4g0010676 Lotus japonicus HOM05D000196 ORTHO05D000279 2.0e-51 206.5 180 57.8
Ca_21462_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 7.7e-51 204.5 180 56.7
Gohir.A10G169200 Gossypium hirsutum HOM05D000196 ORTHO05D000279 7.7e-51 204.5 190 59.5
Lalb_Chr20g0121051 Lupinus albus HOM05D000196 ORTHO05D000279 1.0e-50 204.1 182 61.5
ClCG05G006350 Citrullus lanatus HOM05D000196 ORTHO05D000279 2.2e-50 203.0 179 58.1
Lalb_Chr18g0058951 Lupinus albus HOM05D000196 ORTHO05D000279 2.9e-50 202.6 181 59.7
MELO3C006693.2 Cucumis melo HOM05D000196 ORTHO05D000279 8.5e-50 201.1 179 57.0
Glyma.15G145200 Glycine max HOM05D000196 ORTHO05D000279 1.9e-49 199.9 180 57.8
Manes.03G201000 Manihot esculenta HOM05D000196 ORTHO05D000279 2.5e-49 199.5 181 58.6
Medtr4g121020 Medicago truncatula HOM05D000196 ORTHO05D000279 3.2e-49 199.1 181 56.9
arahy.Tifrunner.gnm1.ann1.QRG75F Arachis hypogaea HOM05D000196 ORTHO05D000279 3.6e-48 195.7 182 58.2
Phvul.009G253200 Phaseolus vulgaris HOM05D000196 ORTHO05D000279 6.1e-48 194.9 180 53.9
arahy.Tifrunner.gnm1.ann1.0DD300 Arachis hypogaea HOM05D000196 ORTHO05D000279 7.9e-48 194.5 182 57.7
CsaV3_3G014970 Cucumis sativus L. HOM05D000196 ORTHO05D000279 7.9e-48 194.5 179 55.9
CSS0049738 Camellia sinensis var. sinensis HOM05D000196 ORTHO05D000279 1.0e-47 194.1 188 59.6
Lalb_Chr15g0089351 Lupinus albus HOM05D000196 ORTHO05D000279 1.4e-47 193.7 180 56.1
Glyma.09G040000 Glycine max HOM05D000196 ORTHO05D000279 1.8e-47 193.4 180 55.0
TPR.G16842 Trifolium pratense HOM05D000196 ORTHO05D000279 3.0e-47 192.6 180 54.4
Gorai.011G196400 Gossypium raimondii HOM05D000196 ORTHO05D000279 3.9e-47 192.2 188 56.9
Sed0000534 Sechium edule HOM05D000196 ORTHO05D000279 6.7e-47 191.4 179 57.0
arahy.Tifrunner.gnm1.ann1.GIY6CE Arachis hypogaea HOM05D000196 ORTHO05D000279 7.4e-46 188.0 181 53.6
Lj6g0011734 Lotus japonicus HOM05D000196 ORTHO05D000279 7.4e-46 188.0 180 57.2
Psat0s1646g0080 Pisum sativum HOM05D000196 ORTHO05D000279 7.4e-46 188.0 182 55.5
Actinidia18654 Actinidia chinensis HOM05D000196 ORTHO05D000279 2.8e-45 186.0 185 55.7
Gohir.A01G033500 Gossypium hirsutum HOM05D000196 ORTHO05D000279 2.8e-45 186.0 184 57.1
arahy.Tifrunner.gnm1.ann1.69B3L2 Arachis hypogaea HOM05D000196 ORTHO05D000279 6.3e-45 184.9 181 52.5
Gohir.D01G023511 Gossypium hirsutum HOM05D000196 ORTHO05D000279 1.4e-44 183.7 184 56.0
Actinidia40342 Actinidia chinensis HOM05D000196 ORTHO05D000279 1.8e-44 183.3 185 55.7
VMungo1309G1042 Vigna mungo HOM05D000196 ORTHO05D000279 3.1e-44 182.6 180 50.0
Gorai.002G029200 Gossypium raimondii HOM05D000196 ORTHO05D000279 4.1e-44 182.2 184 55.4
Sc19g0003410 Simmondsia chinensis HOM05D000196 ORTHO05D000279 4.1e-44 182.2 178 60.1
Sed0010768 Sechium edule HOM05D000196 ORTHO05D000279 6.9e-44 181.4 180 54.4
Peaxi162Scf00102g00116 Petunia axillaris HOM05D000196 ORTHO05D000279 1.2e-43 180.6 182 56.0
Oeu006434.2 Olea europaea HOM05D000196 ORTHO05D000279 2.6e-43 179.5 180 55.6
Hma1.2p1_0013F.1_g009000 Hydrangea macrophylla HOM05D000196 ORTHO05D000279 1.7e-42 176.8 178 56.7
Hund03095 Selenicereus undatus HOM05D000196 ORTHO05D000279 6.5e-42 174.9 178 52.8
AUR62016155 Chenopodium quinoa HOM05D000196 ORTHO05D000279 3.2e-41 172.6 177 53.7
AUR62035070 Chenopodium quinoa HOM05D000196 ORTHO05D000279 3.2e-41 172.6 177 54.2
FAN07G0014 Fragaria x ananassa HOM05D000196 ORTHO05D000279 4.2e-41 172.2 123 73.2
CAN.G1013.37 Capsicum annuum HOM05D000196 ORTHO05D000279 5.5e-41 171.8 184 54.3
Lalb_Chr07g0182211 Lupinus albus HOM05D000196 ORTHO05D000279 5.5e-41 171.8 177 54.2
MSTRG.10126 Avicennia marina HOM05D000196 ORTHO05D000279 2.1e-40 169.9 180 52.8
Eucgr.A00189 Eucalyptus grandis HOM05D000196 ORTHO05D000279 5.2e-39 165.2 178 51.1
TAR365G0580 Trochodendron aralioides HOM05D000196 ORTHO05D000279 3.3e-38 162.5 194 49.0
SalBow5G5635 Salvia bowleyana HOM05D000196 ORTHO05D000279 4.4e-38 162.2 180 48.9
Nn4g25687 Nelumbo nucifera HOM05D000196 ORTHO05D000279 1.3e-37 160.6 201 48.3
Oeu016476.1 Olea europaea HOM05D000196 ORTHO05D000279 6.3e-37 158.3 180 51.1
Solyc05g054390.4 Solanum lycopersicum HOM05D000196 ORTHO05D000279 6.3e-37 158.3 184 50.5
Lj3A826T85 Lonicera japonica HOM05D000196 ORTHO05D000279 1.4e-36 157.1 182 51.6
Nitab4.5_0000629g0030 Nicotiana tabacum HOM05D000196 ORTHO05D000279 1.8e-36 156.8 182 48.4
PGSC0003DMG400023534 Solanum tuberosum HOM05D000196 ORTHO05D000279 1.8e-36 156.8 184 50.5
Ca_01884_v3 Cicer arietinum L. HOM05D000196 ORTHO05D000279 2.4e-36 156.4 179 52.0
Peaxi162Scf00065g00519 Petunia axillaris HOM05D000196 ORTHO05D000279 2.4e-36 156.4 182 48.9
Rhsim02G0005800 Rhododendron simsii HOM05D000196 ORTHO05D000279 2.4e-36 156.4 190 48.9
Sopen05g032870 Solanum pennellii HOM05D000196 ORTHO05D000279 2.4e-36 156.4 184 50.5
EL10Ac3g04931 Beta vulgaris HOM05D000196 ORTHO05D000279 4.1e-36 155.6 190 49.5
Lalb_Chr12g0201001 Lupinus albus HOM05D000196 ORTHO05D000279 4.1e-36 155.6 178 51.7
MSTRG.21782 Avicennia marina HOM05D000196 ORTHO05D000279 7.0e-36 154.8 180 48.3
DCAR_002497 Daucus carota HOM05D000196 ORTHO05D000279 1.6e-35 153.7 178 51.1
Hund11948 Selenicereus undatus HOM05D000196 ORTHO05D000279 3.5e-35 152.5 178 50.0
Sopen01g026880 Solanum pennellii HOM05D000196 ORTHO05D000279 1.5e-33 147.1 184 47.8
PGSC0003DMG401025624 Solanum tuberosum HOM05D000196 ORTHO05D000279 3.2e-33 146.0 182 46.7
DCAR_027029 Daucus carota HOM05D000196 ORTHO05D000279 4.2e-33 145.6 181 49.2
MSTRG.3877 Avicennia marina HOM05D000196 ORTHO05D000279 7.2e-33 144.8 189 46.6
PGR031G0356 Punica granatum HOM05D000196 ORTHO05D000279 3.6e-32 142.5 191 47.1
Nitab4.5_0005180g0030 Nicotiana tabacum HOM05D000196 ORTHO05D000279 8.0e-32 141.4 184 48.9
Solyc01g065540.3 Solanum lycopersicum HOM05D000196 ORTHO05D000279 1.4e-31 140.6 184 46.7
Ah.04g155070 Amaranthus hybridus HOM05D000196 ORTHO05D000279 1.8e-31 140.2 187 45.5
Aqoxy2G02846 Aquilegia oxysepala HOM05D000196 ORTHO05D000279 5.2e-31 138.7 201 42.8
Oeu048863.2 Olea europaea HOM05D000196 ORTHO05D000279 5.2e-31 138.7 180 46.1
Nitab4.5_0000616g0080 Nicotiana tabacum HOM05D000196 ORTHO05D000279 8.8e-31 137.9 190 44.7
Rhsim04G0231700 Rhododendron simsii HOM05D000196 ORTHO05D000279 8.8e-31 137.9 175 48.0
CsaV3_6G022600 Cucumis sativus L. HOM05D000196 ORTHO05D000279 1.2e-30 137.5 170 45.9
Nn3g21597 Nelumbo nucifera HOM05D000196 ORTHO05D000279 2.6e-30 136.3 198 41.9
vmacro08080 Vaccinium macrocarpon HOM05D000196 ORTHO05D000279 9.7e-30 134.4 166 47.6
ClCG06G004810 Citrullus lanatus HOM05D000196 ORTHO05D000279 1.7e-29 133.7 170 45.9
vmacro15199 Vaccinium macrocarpon HOM05D000196 ORTHO05D000279 1.7e-29 133.7 161 46.6
CAN.G14.4 Capsicum annuum HOM05D000196 ORTHO05D000279 3.7e-29 132.5 178 46.6
TAR636G3020 Trochodendron aralioides HOM05D000196 ORTHO05D000279 6.3e-29 131.7 144 52.8
MELO3C021290.2 Cucumis melo HOM05D000196 ORTHO05D000279 1.4e-28 130.6 170 44.1
Nitab4.5_0001097g0090 Nicotiana tabacum HOM05D000196 ORTHO05D000279 3.1e-28 129.4 190 45.8
TAR362G0266 Trochodendron aralioides HOM05D000196 ORTHO05D000279 5.3e-28 128.6 203 42.9
MBI18_g05907_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 5.9e-27 125.2 232 36.2
DCAR_030489 Daucus carota HOM05D000196 ORTHO05D000279 2.9e-26 122.9 177 44.6
Sed0021555 Sechium edule HOM05D000196 ORTHO05D000279 3.8e-26 122.5 169 43.8
Medtr2g034960 Medicago truncatula HOM05D000196 ORTHO05D000279 5.0e-26 122.1 180 42.8
Sc25g0003500 Simmondsia chinensis HOM05D000196 ORTHO05D000279 5.0e-26 122.1 182 44.5
TPR.G27949 Trifolium pratense HOM05D000196 ORTHO05D000279 1.9e-25 120.2 180 44.4
Ah.13g072160 Amaranthus hybridus HOM05D000196 ORTHO05D000279 6.1e-24 115.2 184 42.4
TAR633G2074 Trochodendron aralioides HOM05D000196 ORTHO05D000279 2.3e-23 113.2 192 39.6
Lj6C684T1 Lonicera japonica HOM05D000196 ORTHO05D000279 2.0e-22 110.2 180 40.0
SalBow8G3787 Salvia bowleyana HOM05D000196 ORTHO05D000279 7.7e-19 98.2 175 41.7
PSO445G0003 Papaver somniferum HOM05D000196 ORTHO05D000279 2.3e-18 96.7 174 35.6
Lsat_1_v5_gn_1_44261 Lactuca sativa HOM05D000196 ORTHO05D000279 5.0e-18 95.5 181 39.8
Sopen07g022130 Solanum pennellii HOM05D000196 ORTHO05D000279 3.2e-17 92.8 133 42.1
Nitab4.5_0000570g0280 Nicotiana tabacum HOM05D000196 ORTHO05D000279 1.0e-15 87.8 103 42.7
Cfa010599 Carpinus fangiana HOM05D000196 ORTHO05D000279 1.4e-15 87.4 49 93.9
ECA248G2147 Erigeron canadensis HOM05D000196 ORTHO05D000279 5.2e-15 85.5 193 34.7
Nitab4.5_0003484g0070 Nicotiana tabacum HOM05D000196 ORTHO05D000279 1.2e-14 84.3 97 43.3
PSO170G4582 Papaver somniferum HOM05D000196 ORTHO05D000279 2.0e-14 83.6 186 32.8
HanXRQChr11g0353241 Helianthus annuus HOM05D000196 ORTHO05D000279 2.6e-14 83.2 190 36.3
unitig_699.g19984 Utricularia gibba HOM05D000196 ORTHO05D000279 4.4e-14 82.4 183 32.2
SalBow8G3964 Salvia bowleyana HOM05D000196 ORTHO05D000279 5.7e-14 82.0 176 38.1
GSVIVG01035051001 Vitis vinifera HOM05D000196 ORTHO05D000279 8.3e-13 78.2 47 76.6
HanXRQChr01g0030181 Helianthus annuus HOM05D000196 ORTHO05D000279 1.4e-12 77.4 187 35.3
Psat1g158000 Pisum sativum HOM05D000196 ORTHO05D000279 3.1e-12 76.3 93 49.5
THA.LOC104820279 Tarenaya hassleriana HOM05D000196 ORTHO05D000279 3.1e-12 76.3 208 35.6
Migut.G00111 Erythranthe guttata HOM05D000196 ORTHO05D000279 7.0e-12 75.1 180 36.1
MBI19_g14288_MAGBIO Magnolia biondii HOM05D000196 ORTHO05D000279 9.2e-12 74.7 243 28.0
Sp3g15100 Schrenkiella parvula HOM05D000196 ORTHO05D000279 3.5e-11 72.8 194 35.6
Aa31LG10G6070 Aethionema arabicum HOM05D000196 ORTHO05D000279 5.9e-11 72.0 196 36.2
Carub.0003s1657 Capsella rubella HOM05D000196 ORTHO05D000279 1.7e-10 70.5 174 35.1
AT3G16857 Arabidopsis thaliana HOM05D000196 ORTHO05D000279 5.0e-10 68.9 159 35.8
BolC1t02634H Brassica oleracea HOM05D000196 ORTHO05D000279 3.3e-09 66.2 80 48.8
A01p21540 Brassica napus HOM05D000196 ORTHO05D000279 4.3e-09 65.9 79 49.4
BraA01t02061Z Brassica rapa HOM05D000196 ORTHO05D000279 4.3e-09 65.9 79 49.4
BcaC09g50296 Brassica carinata HOM05D000196 ORTHO05D000279 7.3e-09 65.1 80 47.5
C01p26890 Brassica napus HOM05D000196 ORTHO05D000279 7.3e-09 65.1 80 47.5
AL3G29820 Arabidopsis lyrata HOM05D000196 ORTHO05D000279 9.5e-09 64.7 174 34.5
BcaNung00228 Brassica carinata HOM05D000196 ORTHO05D000279 9.5e-09 64.7 147 36.7
AL7G39060 Arabidopsis lyrata HOM05D000196 ORTHO05D000279 1.6e-08 63.9 206 33.5
Migut.N00061 Erythranthe guttata HOM05D000196 ORTHO05D000279 2.8e-08 63.2 167 31.7
BcaC05g28843 Brassica carinata HOM05D000196 ORTHO05D000279 4.7e-08 62.4 197 33.5
C05p49490 Brassica napus HOM05D000196 ORTHO05D000279 4.7e-08 62.4 197 33.5
BolC5t33699H Brassica oleracea HOM05D000196 ORTHO05D000279 8.0e-08 61.6 197 33.5
BraA05t22101Z Brassica rapa HOM05D000196 ORTHO05D000279 8.0e-08 61.6 197 33.5
Oeu003754.1 Olea europaea HOM05D000196 ORTHO05D000279 8.0e-08 61.6 180 31.7
BcaB06g25782 Brassica carinata HOM05D000196 ORTHO05D000279 1.0e-07 61.2 194 32.5
CARHR290740 Cardamine hirsuta HOM05D000196 ORTHO05D000279 2.3e-07 60.1 181 31.5
Carub.0007s2550 Capsella rubella HOM05D000196 ORTHO05D000279 4.4e-06 55.8 234 28.6
Thhalv10024686m.g Eutrema salsugineum HOM05D000196 ORTHO05D000279 5.7e-06 55.5 190 31.1


User provided reference genes

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