Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 1.8e-265 918.7 469 100.0
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 1.3e-175 620.2 428 79.7
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 7.7e-131 471.5 464 59.7
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 1.5e-126 457.2 432 60.9
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 4.9e-101 372.5 471 49.3
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 7.8e-99 365.2 464 49.4
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.0e-98 364.8 436 51.1
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 3.6e-88 329.7 474 44.5
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 2.3e-87 327.0 482 44.8
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 4.4e-86 322.8 464 45.9
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.3e-85 321.2 459 45.1
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 1.6e-83 314.3 470 44.3
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 2.1e-83 313.9 434 46.3
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 3.5e-83 313.2 472 44.1
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 6.0e-83 312.4 507 43.2
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 1.0e-82 311.6 435 45.7
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 2.3e-82 310.5 468 45.1
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 2.5e-81 307.0 459 44.2
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 3.6e-80 303.1 440 46.6
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 5.2e-79 299.3 473 44.4
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 5.2e-79 299.3 456 43.9
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 3.4e-78 296.6 474 43.2
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 4.1e-76 289.7 438 44.1
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.3e-74 283.9 472 42.4
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 2.5e-73 280.4 399 45.9
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 2.1e-72 277.3 441 44.2
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.1e-72 277.3 441 44.2
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.1e-72 277.3 441 44.2
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 4.0e-71 273.1 464 41.4
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 2.0e-70 270.8 381 46.2
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 2.0e-70 270.8 440 42.5
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 5.8e-70 269.2 466 39.5
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 1.3e-69 268.1 467 40.5
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 2.2e-69 267.3 466 41.6
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 3.8e-69 266.5 444 42.1
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 6.4e-69 265.8 473 40.0
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 3.2e-68 263.5 444 42.1
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 9.3e-68 261.9 466 39.5
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 4.6e-67 259.6 441 39.7
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 7.8e-67 258.8 483 39.5
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 1.1e-63 248.4 395 43.3
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 2.4e-63 247.3 464 39.4
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 1.5e-62 244.6 415 40.5
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 2.0e-62 244.2 438 38.8
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 7.6e-62 242.3 498 35.3
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 1.7e-61 241.1 443 38.8
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 7.1e-60 235.7 430 38.4
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 1.2e-59 235.0 467 36.6
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 2.3e-58 230.7 417 39.3
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 1.3e-56 224.9 526 34.2
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 2.1e-56 224.2 408 38.2
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 3.6e-56 223.4 494 36.8
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 1.1e-55 221.9 434 38.2
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 4.9e-53 213.0 441 38.1
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 8.4e-53 212.2 342 41.8
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 3.2e-52 210.3 290 49.3
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 1.3e-50 204.9 322 43.8
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 1.6e-48 198.0 447 36.2
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 6.2e-48 196.1 285 45.3
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 3.1e-47 193.7 477 33.5
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 3.1e-47 193.7 458 34.3
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 5.3e-47 193.0 481 32.6
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 1.7e-45 188.0 399 36.3
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 6.5e-45 186.0 382 36.1
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 4.2e-44 183.3 383 35.8
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 7.1e-44 182.6 460 32.6
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 9.3e-44 182.2 451 36.1
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 2.1e-43 181.0 379 36.1
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 2.3e-42 177.6 465 33.3
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 1.9e-41 174.5 434 32.7
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 4.8e-40 169.9 156 59.6
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 4.1e-39 166.8 225 47.6
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 5.0e-37 159.8 336 36.6
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 8.4e-37 159.1 145 55.9
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 4.2e-36 156.8 253 39.9
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 3.0e-34 150.6 424 32.1
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 4.3e-33 146.7 238 41.6
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 1.3e-32 145.2 381 33.1
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 6.3e-32 142.9 427 30.4
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 1.8e-31 141.4 220 41.4
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 4.1e-31 140.2 408 31.9
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 3.9e-26 123.6 281 34.5
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 7.4e-25 119.4 183 43.7
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 4.5e-22 110.2 465 27.7
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 1.7e-21 108.2 147 45.6
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 1.9e-20 104.8 370 26.8
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 1.5e-17 95.1 171 36.8
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 3.7e-16 90.5 297 30.0
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 3.8e-13 80.5 97 45.4
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 1.1e-12 79.0 70 58.6
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 4.7e-11 73.6 217 27.6
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 5.7e-09 66.6 373 25.7


User provided reference genes

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