Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01050 Corylus avellana HOM05D007701 ORTHO05D006440 1.5e-60 236.1 129 100.0
Cfa015502 Carpinus fangiana HOM05D007701 ORTHO05D006440 9.1e-58 226.9 129 96.1
CiPaw.01G153900 Carya illinoinensis HOM05D007701 ORTHO05D006440 2.0e-41 172.6 132 78.8
QL12p038321 Quercus lobata HOM05D007701 ORTHO05D006440 4.4e-36 154.8 128 72.7
CiPaw.02G087100 Carya illinoinensis HOM05D007701 ORTHO05D006440 1.2e-33 146.7 128 71.9
Duzib151G0788 Durio zibethinus HOM05D007701 ORTHO05D006440 1.6e-30 136.3 130 63.1
Thecc.04G276200 Theobroma cacao HOM05D007701 ORTHO05D006440 1.4e-29 133.3 128 63.3
Duzib212G0358 Durio zibethinus HOM05D007701 ORTHO05D006440 1.5e-28 129.8 127 63.0
Phvul.006G160600 Phaseolus vulgaris HOM05D007701 ORTHO05D006440 2.6e-28 129.0 124 62.1
Glyma.15G098700 Glycine max HOM05D007701 ORTHO05D006440 3.4e-28 128.6 132 60.6
Glyma.13G214500 Glycine max HOM05D007701 ORTHO05D006440 2.2e-27 125.9 135 57.8
Potri.010G031700 Populus trichocarpa HOM05D007701 ORTHO05D006440 2.0e-25 119.4 121 62.8
Dinv38332 Davidia involucrata HOM05D007701 ORTHO05D006440 4.5e-25 118.2 129 58.1
QL06p007247 Quercus lobata HOM05D007701 ORTHO05D006440 4.5e-25 118.2 119 67.2
Dinv44434 Davidia involucrata HOM05D007701 ORTHO05D006440 1.5e-23 113.2 120 61.7
Lalb_Chr15g0087071 Lupinus albus HOM05D007701 ORTHO05D006440 9.5e-23 110.5 127 59.1
Potri.008G195700 Populus trichocarpa HOM05D007701 ORTHO05D006440 1.2e-22 110.2 120 57.5
TWI09G0131 Tripterygium wilfordii HOM05D007701 ORTHO05D006440 1.2e-22 110.2 98 65.3
COL.COLO4_13938 Corchorus olitorius HOM05D007701 ORTHO05D006440 1.6e-22 109.8 119 60.5
Medtr2g020370 Medicago truncatula HOM05D007701 ORTHO05D006440 2.8e-22 109.0 132 53.0
Sabra10G0031300 Salix brachista HOM05D007701 ORTHO05D006440 2.8e-22 109.0 115 60.9
Hma1.2p1_0078F.1_g040840 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 3.6e-22 108.6 124 56.5
Ca_00580_v3 Cicer arietinum L. HOM05D007701 ORTHO05D006440 8.0e-22 107.5 128 53.1
Lalb_Chr20g0118191 Lupinus albus HOM05D007701 ORTHO05D006440 5.2e-21 104.8 130 56.2
Manes.03G190500 Manihot esculenta HOM05D007701 ORTHO05D006440 1.2e-20 103.6 121 54.5
QL12p024168 Quercus lobata HOM05D007701 ORTHO05D006440 2.9e-19 99.0 116 56.0
TPR.G1519 Trifolium pratense HOM05D007701 ORTHO05D006440 1.8e-18 96.3 132 48.5
LjContig00389g0004887 Lotus japonicus HOM05D007701 ORTHO05D006440 5.4e-18 94.7 118 53.4
Potri.014G135100 Populus trichocarpa HOM05D007701 ORTHO05D006440 7.0e-18 94.4 125 54.4
Prupe.1G143000 Prunus persica HOM05D016333 ORTHO05D006440 1.6e-17 93.2 120 55.0
ClCG06G005430 Citrullus lanatus HOM05D007701 ORTHO05D006440 4.6e-17 91.7 118 55.9
CAN.G2895.2 Capsicum annuum HOM05D007701 ORTHO05D006440 2.3e-16 89.4 126 51.6
CiPaw.07G100300 Carya illinoinensis HOM05D007701 ORTHO05D006440 2.5e-15 85.9 99 57.6
CAN.G426.28 Capsicum annuum HOM05D007701 ORTHO05D006440 3.3e-15 85.5 126 50.0
Ciclev10022800m.g Citrus clementina HOM05D007701 ORTHO05D006440 4.3e-15 85.1 120 50.0
Peaxi162Scf00041g01724 Petunia axillaris HOM05D020366 ORTHO05D006440 4.3e-15 85.1 100 57.0
Potri.002G207500 Populus trichocarpa HOM05D007701 ORTHO05D006440 4.3e-15 85.1 120 51.7
RcHm_v2.0_Chr4g0420861 Rosa chinensis HOM05D016333 ORTHO05D006440 4.3e-15 85.1 120 55.8
Oeu021618.1 Olea europaea HOM05D007701 ORTHO05D006440 1.6e-14 83.2 118 49.2
Sopen09g029300 Solanum pennellii HOM05D007701 ORTHO05D006440 2.8e-14 82.4 120 50.8
Solyc09g074450.1 Solanum lycopersicum HOM05D007701 ORTHO05D006440 4.7e-14 81.6 120 50.8
PGSC0003DMG400031864 Solanum tuberosum HOM05D007701 ORTHO05D006440 6.2e-14 81.3 113 51.3
Prupe.8G252700 Prunus persica HOM05D007701 ORTHO05D006440 1.4e-13 80.1 117 50.4
Sabra08G0148800 Salix brachista HOM05D007701 ORTHO05D006440 1.4e-13 80.1 127 47.2
Psat1g187000 Pisum sativum HOM05D007701 ORTHO05D006440 1.8e-13 79.7 129 46.5
Hma1.2p1_0209F.1_g089060 Hydrangea macrophylla HOM05D007701 ORTHO05D006440 3.1e-13 79.0 125 47.2
Nitab4.5_0002093g0180 Nicotiana tabacum HOM05D000530 ORTHO05D000621 3.1e-13 79.0 101 54.5
FvH4_4g17060 Fragaria vesca HOM05D016333 ORTHO05D006440 5.2e-13 78.2 119 53.8
Nitab4.5_0004150g0050 Nicotiana tabacum HOM05D007701 ORTHO05D006440 5.2e-13 78.2 101 54.5
Thecc.01G290700 Theobroma cacao HOM05D007701 ORTHO05D006440 1.2e-12 77.0 127 44.9
Nitab4.5_0000232g0150 Nicotiana tabacum HOM05D020366 ORTHO05D006440 1.5e-12 76.6 106 52.8
Nitab4.5_0003631g0050 Nicotiana tabacum HOM05D020366 ORTHO05D006440 1.5e-12 76.6 105 55.2
Gohir.A11G118000 Gossypium hirsutum HOM05D007701 ORTHO05D006440 2.0e-12 76.3 117 52.1
Sopen00g012820 Solanum pennellii HOM05D020366 ORTHO05D006440 2.6e-12 75.9 107 55.1
Manes.05G068100 Manihot esculenta HOM05D007701 ORTHO05D006440 3.4e-12 75.5 126 47.6
FAN07G1026 Fragaria x ananassa HOM05D016333 ORTHO05D006440 4.4e-12 75.1 115 53.9
Gohir.D11G122900 Gossypium hirsutum HOM05D007701 ORTHO05D006440 9.8e-12 73.9 119 49.6
Gorai.007G131800 Gossypium raimondii HOM05D007701 ORTHO05D006440 9.8e-12 73.9 119 49.6
FAN12G2150 Fragaria x ananassa HOM05D016333 ORTHO05D006440 1.3e-11 73.6 115 53.0
FAN12G2470 Fragaria x ananassa HOM05D016333 ORTHO05D006440 1.3e-11 73.6 115 53.0
Solyc04g074167.1 Solanum lycopersicum HOM05D020366 ORTHO05D006440 1.3e-11 73.6 115 53.0
CANSAT25G3325 Cannabis sativa HOM05D007701 ORTHO05D006440 1.7e-11 73.2 107 50.5
CAN.G101.7 Capsicum annuum HOM05D020366 ORTHO05D006440 3.7e-11 72.0 117 52.1
Sc19g0004910 Simmondsia chinensis HOM05D007701 ORTHO05D006440 1.4e-10 70.1 93 52.7
FAN17G0507 Fragaria x ananassa HOM05D016333 ORTHO05D006440 2.4e-10 69.3 100 55.0
Sopen11g019180 Solanum pennellii HOM05D000047 ORTHO05D000044 2.4e-10 69.3 102 50.0
Medtr1g088970 Medicago truncatula HOM05D007701 ORTHO05D006440 4.1e-10 68.6 109 47.7
THA.LOC104802728 Tarenaya hassleriana HOM05D012083 ORTHO05D006440 9.2e-10 67.4 125 39.2
MELO3C021367.2 Cucumis melo HOM05D007701 ORTHO05D006440 1.2e-09 67.0 110 50.9
CsaV3_6G005680 Cucumis sativus L. HOM05D007701 ORTHO05D006440 1.2e-09 67.0 110 50.9
BcaB08g36652 Brassica carinata HOM05D012083 ORTHO05D006440 2.0e-09 66.2 69 58.0
Migut.D00227 Erythranthe guttata HOM05D007701 ORTHO05D006440 2.7e-09 65.9 92 47.8
Gohir.A08G072500 Gossypium hirsutum HOM05D007701 ORTHO05D006440 3.5e-09 65.5 122 45.1
Lalb_Chr02g0143101 Lupinus albus HOM05D007701 ORTHO05D006440 4.6e-09 65.1 116 44.0
A10p20870 Brassica napus HOM05D012083 ORTHO05D006440 1.0e-08 63.9 76 56.6
COL.COLO4_08025 Corchorus olitorius HOM05D007701 ORTHO05D006440 1.0e-08 63.9 123 41.5
MD16G1176200 Malus domestica HOM05D016333 ORTHO05D006440 1.0e-08 63.9 118 47.5
BraA10t44152Z Brassica rapa HOM05D012083 ORTHO05D006440 1.3e-08 63.5 94 48.9
Gohir.D08G080500 Gossypium hirsutum HOM05D007701 ORTHO05D006440 1.3e-08 63.5 122 44.3
Duzib138G0471 Durio zibethinus HOM05D007701 ORTHO05D006440 3.9e-08 62.0 118 43.2
Gohir.A10G101770 Gossypium hirsutum HOM05D033993 ORTHO05D006440 1.5e-07 60.1 51 60.8
BcaC04g18652 Brassica carinata HOM05D012083 ORTHO05D006440 1.9e-07 59.7 90 48.9
BcaC04g18653 Brassica carinata HOM05D012083 ORTHO05D006440 1.9e-07 59.7 90 48.9
C09p57760 Brassica napus HOM05D012083 ORTHO05D006440 1.9e-07 59.7 90 48.9
BolC9t58646H Brassica oleracea HOM05D012083 ORTHO05D006440 1.9e-07 59.7 90 48.9
Ca_10375_v3 Cicer arietinum L. HOM05D007701 ORTHO05D006440 1.9e-07 59.7 92 47.8
Gohir.D10G166000 Gossypium hirsutum HOM05D033993 ORTHO05D006440 1.9e-07 59.7 61 54.1
Gorai.011G185400 Gossypium raimondii HOM05D033993 ORTHO05D006440 1.9e-07 59.7 51 60.8
Os01g0937900 Oryza sativa ssp. japonica HOM05D007701 ORTHO05D006440 1.9e-07 59.7 71 54.9
Migut.G00219 Erythranthe guttata HOM05D007701 ORTHO05D006440 2.5e-07 59.3 93 49.5
SalBow2G1499 Salvia bowleyana HOM05D007701 ORTHO05D006440 3.3e-07 58.9 130 40.8
CARHR194310 Cardamine hirsuta HOM05D012083 ORTHO05D006440 4.3e-07 58.5 77 50.6
CiPaw.08G100300 Carya illinoinensis HOM05D007701 ORTHO05D006440 5.6e-07 58.2 84 48.8
CDE05G2550 Ceratophyllum demersum HOM05D007701 ORTHO05D006440 7.3e-07 57.8 75 54.7
SalBow6G6224 Salvia bowleyana HOM05D007701 ORTHO05D006440 7.3e-07 57.8 116 44.8
Eucgr.K03437 Eucalyptus grandis HOM05D007701 ORTHO05D006440 9.5e-07 57.4 49 65.3
AT5G18690 Arabidopsis thaliana HOM05D012083 ORTHO05D006440 1.2e-06 57.0 69 58.0
Sed0020497 Sechium edule HOM05D007701 ORTHO05D006440 1.2e-06 57.0 103 45.6
Carub.0006s1699 Capsella rubella HOM05D012083 ORTHO05D006440 2.1e-06 56.2 79 50.6
AL6G29970 Arabidopsis lyrata HOM05D012083 ORTHO05D006440 3.6e-06 55.5 73 53.4
Gorai.004G085600 Gossypium raimondii HOM05D007701 ORTHO05D006440 4.7e-06 55.1 95 46.3
Thhalv10015003m.g Eutrema salsugineum HOM05D012083 ORTHO05D006440 6.2e-06 54.7 104 46.2
SGA_v2.0_scaffold57G20262 Striga asiatica HOM05D007701 ORTHO05D006440 8.1e-06 54.3 121 38.0


User provided reference genes

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