Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 4.3e-26 120.6 60 100.0
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 5.2e-24 113.6 58 94.8
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 1.3e-19 99.0 72 72.2
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 3.9e-19 97.4 72 70.8
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 3.9e-19 97.4 72 70.8
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 5.0e-19 97.1 72 72.2
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 8.6e-19 96.3 72 72.2
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.1e-18 95.9 72 72.2
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.1e-18 95.9 72 70.8
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 1.5e-18 95.5 70 72.9
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.5e-18 95.5 72 70.8
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 1.9e-18 95.1 72 70.8
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.5e-18 94.7 72 69.4
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 2.5e-18 94.7 72 68.1
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 4.3e-18 94.0 69 71.0
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 4.3e-18 94.0 72 68.1
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 4.3e-18 94.0 75 66.7
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 5.6e-18 93.6 72 68.1
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 7.3e-18 93.2 72 68.1
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 7.3e-18 93.2 71 66.2
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 7.3e-18 93.2 71 70.4
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 9.5e-18 92.8 72 66.7
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 9.5e-18 92.8 72 66.7
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 1.2e-17 92.4 72 68.1
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 1.6e-17 92.0 72 68.1
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.6e-17 92.0 72 68.1
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.6e-17 92.0 72 68.1
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.6e-17 92.0 72 68.1
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 1.6e-17 92.0 72 69.4
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 2.1e-17 91.7 72 68.1
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 2.1e-17 91.7 68 70.6
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 2.8e-17 91.3 72 68.1
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.6e-17 90.9 72 66.7
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.6e-17 90.9 72 68.1
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 3.6e-17 90.9 72 68.1
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 4.7e-17 90.5 72 68.1
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 4.7e-17 90.5 72 68.1
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 4.7e-17 90.5 72 65.3
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 4.7e-17 90.5 72 63.9
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 6.2e-17 90.1 72 65.3
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 6.2e-17 90.1 68 66.2
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.2e-17 90.1 72 66.7
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 8.1e-17 89.7 72 63.9
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 1.1e-16 89.4 72 66.7
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 1.1e-16 89.4 72 68.1
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 1.1e-16 89.4 72 68.1
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 1.1e-16 89.4 70 68.6
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.8e-16 88.6 72 63.9
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 1.8e-16 88.6 69 66.7
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 1.8e-16 88.6 72 68.1
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 2.3e-16 88.2 70 65.7
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 2.3e-16 88.2 72 68.1
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 3.1e-16 87.8 85 58.8
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 5.2e-16 87.0 70 60.0
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 5.2e-16 87.0 72 66.7
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 5.2e-16 87.0 69 65.2
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 8.9e-16 86.3 72 65.3
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 1.2e-15 85.9 68 64.7
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 1.2e-15 85.9 68 64.7
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 1.2e-15 85.9 68 64.7
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 2.0e-15 85.1 71 60.6
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 2.6e-15 84.7 70 64.3
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 2.6e-15 84.7 68 64.7
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 2.6e-15 84.7 68 64.7
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 3.4e-15 84.3 72 63.9
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 3.4e-15 84.3 101 50.5
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 4.4e-15 84.0 73 64.4
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 5.8e-15 83.6 59 72.9
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 7.5e-15 83.2 82 54.9
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 9.8e-15 82.8 72 62.5
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 1.3e-14 82.4 68 61.8
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 1.7e-14 82.0 72 59.7
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 1.7e-14 82.0 70 60.0
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.2e-14 81.6 68 63.2
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 2.2e-14 81.6 73 64.4
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 3.7e-14 80.9 68 60.3
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 6.4e-14 80.1 47 85.1
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 6.4e-14 80.1 66 62.1
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 8.3e-14 79.7 65 67.7
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 8.3e-14 79.7 71 60.6
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 1.4e-13 79.0 65 61.5
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 1.9e-13 78.6 81 54.3
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.9e-13 78.6 69 59.4
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.4e-13 78.2 69 59.4
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 2.4e-13 78.2 69 59.4
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 7.1e-13 76.6 72 56.9
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 9.2e-13 76.3 64 65.6
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.2e-12 75.9 42 88.1
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 2.1e-12 75.1 59 66.1
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 3.5e-12 74.3 42 85.7
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 6.0e-12 73.6 41 85.4
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 1.3e-11 72.4 51 66.7
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 1.7e-11 72.0 41 82.9
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 6.6e-11 70.1 41 85.4
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 6.6e-11 70.1 38 84.2
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 1.5e-10 68.9 41 75.6
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 3.3e-10 67.8 42 73.8
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 4.3e-10 67.4 41 80.5
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 7.3e-10 66.6 41 78.0
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 2.1e-09 65.1 42 73.8
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 2.8e-09 64.7 41 73.2
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 3.6e-09 64.3 41 78.0
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 1.8e-08 62.0 41 73.2
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 1.8e-08 62.0 61 54.1
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 3.1e-08 61.2 36 80.6
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 4.0e-08 60.8 70 47.1
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 8.9e-08 59.7 35 77.1
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 2.6e-07 58.2 35 80.0


User provided reference genes

Program Settings