Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01029 Corylus avellana HOM05D007734 ORTHO05D009807 9.6e-40 166.4 85 100.0
Cfa015520 Carpinus fangiana HOM05D007734 ORTHO05D009807 3.1e-38 161.4 85 97.6
QL06p006592 Quercus lobata HOM05D007734 ORTHO05D009807 9.6e-32 139.8 88 80.7
CiPaw.01G155700 Carya illinoinensis HOM05D007734 ORTHO05D009807 6.2e-31 137.1 94 79.8
CiPaw.02G088300 Carya illinoinensis HOM05D007734 ORTHO05D009807 4.0e-30 134.4 91 79.1
Lj4g0025137 Lotus japonicus HOM05D007734 ORTHO05D009807 4.5e-29 131.0 80 77.5
Sed0021110 Sechium edule HOM05D007734 ORTHO05D009807 7.6e-29 130.2 89 71.9
FAN07G1074 Fragaria x ananassa HOM05D007734 ORTHO05D009807 1.7e-28 129.0 89 71.9
MD13G1176100 Malus domestica HOM05D007734 ORTHO05D009807 2.2e-28 128.6 91 71.4
RcHm_v2.0_Chr4g0420431 Rosa chinensis HOM05D007734 ORTHO05D009807 2.2e-28 128.6 89 71.9
FAN17G2648 Fragaria x ananassa HOM05D007734 ORTHO05D009807 4.9e-28 127.5 89 70.8
CANSAT78G1562 Cannabis sativa HOM05D007734 ORTHO05D009807 6.4e-28 127.1 77 77.9
ClCG06G005560 Citrullus lanatus HOM05D007734 ORTHO05D009807 6.4e-28 127.1 72 83.3
FvH4_4g16860 Fragaria vesca HOM05D007734 ORTHO05D009807 6.4e-28 127.1 89 69.7
FAN12G0936 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.4e-28 127.1 89 69.7
FAN12G2573 Fragaria x ananassa HOM05D007734 ORTHO05D009807 6.4e-28 127.1 89 69.7
Glyma.07G252900 Glycine max HOM05D007734 ORTHO05D009807 6.4e-28 127.1 84 73.8
GSVIVG01017837001 Vitis vinifera HOM05D007734 ORTHO05D009807 8.4e-28 126.7 93 67.7
MELO3C021378.2 Cucumis melo HOM05D007734 ORTHO05D009807 1.4e-27 125.9 72 81.9
CsaV3_6G005600 Cucumis sativus L. HOM05D007734 ORTHO05D009807 1.4e-27 125.9 72 81.9
arahy.Tifrunner.gnm1.ann1.80YKV9 Arachis hypogaea HOM05D007734 ORTHO05D009807 1.9e-27 125.6 85 70.6
arahy.Tifrunner.gnm1.ann1.F9B3QK Arachis hypogaea HOM05D007734 ORTHO05D009807 1.9e-27 125.6 85 70.6
Glyma.17G021500 Glycine max HOM05D007734 ORTHO05D009807 2.4e-27 125.2 80 73.8
MD16G1177900 Malus domestica HOM05D007734 ORTHO05D009807 2.4e-27 125.2 77 75.3
Thecc.04G274000 Theobroma cacao HOM05D007734 ORTHO05D009807 3.2e-27 124.8 90 68.9
TWI73G0877 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 3.2e-27 124.8 90 70.0
TWI09G1295 Tripterygium wilfordii HOM05D007734 ORTHO05D009807 4.2e-27 124.4 89 70.8
Gohir.D10G164200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 7.1e-27 123.6 92 68.5
Gorai.011G183300 Gossypium raimondii HOM05D007734 ORTHO05D009807 7.1e-27 123.6 92 68.5
Sed0016523 Sechium edule HOM05D007734 ORTHO05D009807 7.1e-27 123.6 72 80.6
Duzib151G0459 Durio zibethinus HOM05D007734 ORTHO05D009807 9.3e-27 123.2 91 69.2
Hma1.2p1_0643F.1_g194590 Hydrangea macrophylla HOM05D007734 ORTHO05D009807 9.3e-27 123.2 93 64.5
Phvul.003G099200 Phaseolus vulgaris HOM05D007734 ORTHO05D009807 9.3e-27 123.2 80 71.2
Prupe.1G145200 Prunus persica HOM05D007734 ORTHO05D009807 1.2e-26 122.9 91 69.2
Duzib052G0038 Durio zibethinus HOM05D007734 ORTHO05D009807 1.6e-26 122.5 91 70.3
CDE05G0384 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 2.7e-26 121.7 81 71.6
Eucgr.H03661 Eucalyptus grandis HOM05D007734 ORTHO05D009807 3.5e-26 121.3 91 64.8
Migut.G00233 Erythranthe guttata HOM05D007734 ORTHO05D009807 4.6e-26 120.9 79 70.9
Gohir.A10G104500 Gossypium hirsutum HOM05D007734 ORTHO05D009807 1.0e-25 119.8 92 66.3
Gorai.006G074800 Gossypium raimondii HOM05D007734 ORTHO05D009807 1.8e-25 119.0 77 71.4
Atru.chr4.2717 Acer truncatum HOM05D007734 ORTHO05D009807 2.3e-25 118.6 70 78.6
TAR365G0453 Trochodendron aralioides HOM05D007734 ORTHO05D009807 2.3e-25 118.6 92 65.2
Gohir.D09G060100 Gossypium hirsutum HOM05D007734 ORTHO05D009807 5.1e-25 117.5 77 71.4
Sabra08G0163100 Salix brachista HOM05D007734 ORTHO05D009807 5.1e-25 117.5 85 67.1
Oeu044804.1 Olea europaea HOM05D007734 ORTHO05D009807 6.7e-25 117.1 86 66.3
Aa31LG11G10850 Aethionema arabicum HOM05D007734 ORTHO05D009807 8.7e-25 116.7 72 73.6
Peaxi162Scf00095g00125 Petunia axillaris HOM05D007734 ORTHO05D009807 1.9e-24 115.5 89 64.0
CSS0028590 Camellia sinensis var. sinensis HOM05D007734 ORTHO05D009807 2.5e-24 115.2 94 63.8
Nn4g26101 Nelumbo nucifera HOM05D007734 ORTHO05D009807 3.3e-24 114.8 92 63.0
Potri.010G026900 Populus trichocarpa HOM05D007734 ORTHO05D009807 5.6e-24 114.0 79 68.4
BraA03t10238Z Brassica rapa HOM05D007734 ORTHO05D009807 7.4e-24 113.6 78 69.2
Manes.03G189200 Manihot esculenta HOM05D007734 ORTHO05D009807 7.4e-24 113.6 84 61.9
Potri.008G197300 Populus trichocarpa HOM05D007734 ORTHO05D009807 7.4e-24 113.6 78 67.9
Ca_30429_v3 Cicer arietinum L. HOM05D007734 ORTHO05D009807 9.6e-24 113.2 84 69.0
Gohir.A09G061200 Gossypium hirsutum HOM05D007734 ORTHO05D009807 9.6e-24 113.2 77 67.5
BcaB01g05276 Brassica carinata HOM05D007734 ORTHO05D009807 1.3e-23 112.8 73 72.6
C03p10680 Brassica napus HOM05D007734 ORTHO05D009807 1.3e-23 112.8 73 72.6
BolC3t13544H Brassica oleracea HOM05D007734 ORTHO05D009807 1.3e-23 112.8 73 72.6
SGA_v2.0_scaffold142G35667 Striga asiatica HOM05D007734 ORTHO05D009807 1.6e-23 112.5 78 65.4
CARHR194160 Cardamine hirsuta HOM05D007734 ORTHO05D009807 2.1e-23 112.1 70 71.4
Ciclev10007097m.g Citrus clementina HOM05D007734 ORTHO05D009807 2.8e-23 111.7 76 69.7
AT5G18850 Arabidopsis thaliana HOM05D007734 ORTHO05D009807 6.2e-23 110.5 71 69.0
MBI19_g13511_MAGBIO Magnolia biondii HOM05D007734 ORTHO05D009807 8.2e-23 110.2 94 60.6
Carub.0006s1717 Capsella rubella HOM05D007734 ORTHO05D009807 1.1e-22 109.8 73 71.2
AL6G30210 Arabidopsis lyrata HOM05D007734 ORTHO05D009807 1.4e-22 109.4 71 69.0
Thhalv10015120m.g Eutrema salsugineum HOM05D007734 ORTHO05D009807 1.4e-22 109.4 70 70.0
Sp6g25520 Schrenkiella parvula HOM05D007734 ORTHO05D009807 1.4e-22 109.4 73 69.9
BcaB01g04888 Brassica carinata HOM05D007734 ORTHO05D009807 1.8e-22 109.0 73 71.2
CAN.G627.13 Capsicum annuum HOM05D007734 ORTHO05D009807 2.4e-22 108.6 91 60.4
Dinv44448 Davidia involucrata HOM05D007734 ORTHO05D009807 4.0e-22 107.8 95 57.9
PSO302G0168 Papaver somniferum HOM05D007734 ORTHO05D009807 4.0e-22 107.8 93 59.1
Lalb_Chr07g0177521 Lupinus albus HOM05D007734 ORTHO05D009807 5.3e-22 107.5 69 72.5
Sopen01g032410 Solanum pennellii HOM05D007734 ORTHO05D009807 5.3e-22 107.5 87 60.9
Nitab4.5_0009396g0030 Nicotiana tabacum HOM05D007734 ORTHO05D009807 6.9e-22 107.1 72 68.1
Solyc01g080590.3 Solanum lycopersicum HOM05D007734 ORTHO05D009807 1.2e-21 106.3 87 59.8
PGSC0003DMG400032093 Solanum tuberosum HOM05D007734 ORTHO05D009807 2.0e-21 105.5 87 59.8
Actinidia40206 Actinidia chinensis HOM05D007734 ORTHO05D009807 5.8e-21 104.0 94 58.5
Cc03_g02610 Coffea canephora HOM05D007734 ORTHO05D009807 5.8e-21 104.0 85 62.4
CDE05G0036 Ceratophyllum demersum HOM05D007734 ORTHO05D009807 7.6e-21 103.6 58 77.6
Psat4g030040 Pisum sativum HOM05D007734 ORTHO05D009807 1.7e-20 102.4 65 75.4
ATR0487G018 Amborella trichopoda HOM05D007734 ORTHO05D009807 2.1e-18 95.5 90 55.6
MSTRG.3964 Avicennia marina HOM05D007734 ORTHO05D009807 2.7e-18 95.1 95 50.5
THA.LOC104818832 Tarenaya hassleriana HOM05D002550 ORTHO05D003420 1.8e-17 92.4 72 58.3
Aqoxy5G00589 Aquilegia oxysepala HOM05D007734 ORTHO05D009807 3.1e-14 81.6 73 56.2
SEGI_32711 Sequoiadendron giganteum HOM05D007734 ORTHO05D009807 4.1e-14 81.3 88 42.0
Sc13g0003750 Simmondsia chinensis HOM05D007734 ORTHO05D009807 3.4e-13 78.2 50 70.0
FAN22G2010 Fragaria x ananassa HOM05D007734 ORTHO05D001690 7.7e-13 77.0 49 71.4
A03p09150 Brassica napus HOM05D007734 ORTHO05D009807 1.4e-11 72.8 51 68.6
Nitab4.5_0000059g0330 Nicotiana tabacum HOM05D007734 ORTHO05D009807 7.2e-11 70.5 55 58.2
Actinidia00065 Actinidia chinensis HOM05D007734 ORTHO05D009807 1.0e-09 66.6 80 47.5
BcaB08g36639 Brassica carinata HOM05D007734 ORTHO05D009807 8.8e-09 63.5 41 68.3
A10p20780 Brassica napus HOM05D007734 ORTHO05D009807 1.8e-06 55.8 46 60.9


User provided reference genes

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