Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_01022 Corylus avellana HOM05D005808 ORTHO05D006196 1.3e-32 142.5 73 100.0
Haze_19066 Corylus avellana HOM05D005808 ORTHO05D006196 2.0e-25 118.6 70 87.1
Haze_19072 Corylus avellana HOM05D005808 ORTHO05D006196 2.0e-25 118.6 70 87.1
QL02p094407 Quercus lobata HOM05D005808 ORTHO05D006196 7.5e-25 116.7 71 81.7
PGR102G1617 Punica granatum HOM05D005808 ORTHO05D006196 6.3e-24 113.6 70 81.4
MD10G1105500 Malus domestica HOM05D005808 ORTHO05D006196 1.8e-23 112.1 70 80.0
FvH4_4g08850 Fragaria vesca HOM05D005808 ORTHO05D006196 1.6e-22 109.0 70 80.0
FAN12G3030 Fragaria x ananassa HOM05D005808 ORTHO05D006196 1.6e-22 109.0 70 80.0
GSVIVG01023706001 Vitis vinifera HOM05D005808 ORTHO05D006196 1.6e-22 109.0 71 76.1
Hma1.2p1_0284F.1_g113760 Hydrangea macrophylla HOM05D005808 ORTHO05D006196 2.0e-22 108.6 66 78.8
CANSAT11G2252 Cannabis sativa HOM05D005808 ORTHO05D006196 2.7e-22 108.2 70 78.6
Thecc.09G155400 Theobroma cacao HOM05D005808 ORTHO05D006196 2.7e-22 108.2 70 80.0
MD05G1099800 Malus domestica HOM05D005808 ORTHO05D006196 3.5e-22 107.8 70 80.0
RcHm_v2.0_Chr4g0405311 Rosa chinensis HOM05D005808 ORTHO05D006196 3.5e-22 107.8 70 78.6
Cpa.g.sc43.20 Carica papaya HOM05D005808 ORTHO05D006196 4.5e-22 107.5 70 81.4
TAR626G1850 Trochodendron aralioides HOM05D005808 ORTHO05D006196 5.9e-22 107.1 70 77.1
CsaV3_2G007730 Cucumis sativus L. HOM05D005808 ORTHO05D006196 7.7e-22 106.7 70 77.1
ClCG02G014280 Citrullus lanatus HOM05D005808 ORTHO05D006196 1.3e-21 105.9 70 77.1
MELO3C004113.2 Cucumis melo HOM05D005808 ORTHO05D006196 1.3e-21 105.9 70 77.1
Duzib168G1041 Durio zibethinus HOM05D005808 ORTHO05D006196 1.3e-21 105.9 70 75.7
Eucgr.C01236 Eucalyptus grandis HOM05D005808 ORTHO05D006196 1.3e-21 105.9 70 77.1
Sed0024595 Sechium edule HOM05D005808 ORTHO05D006196 1.3e-21 105.9 70 75.7
Lalb_Chr19g0124141 Lupinus albus HOM05D005808 ORTHO05D006196 1.7e-21 105.5 70 74.3
Nn5g27515 Nelumbo nucifera HOM05D005808 ORTHO05D006196 1.7e-21 105.5 70 74.3
Aqoxy7G03270 Aquilegia oxysepala HOM05D005808 ORTHO05D006196 2.3e-21 105.1 70 74.3
FAN17G0928 Fragaria x ananassa HOM05D005808 ORTHO05D006196 2.3e-21 105.1 70 77.1
THA.LOC104812192 Tarenaya hassleriana HOM05D005808 ORTHO05D006196 2.3e-21 105.1 70 77.1
Potri.006G179100 Populus trichocarpa HOM05D005808 ORTHO05D006196 2.9e-21 104.8 69 78.3
Prupe.1G100900 Prunus persica HOM05D005808 ORTHO05D006196 2.9e-21 104.8 66 81.8
Sed0021443 Sechium edule HOM05D005808 ORTHO05D006196 2.9e-21 104.8 70 74.3
arahy.Tifrunner.gnm1.ann1.9Q453L Arachis hypogaea HOM05D005808 ORTHO05D006196 3.8e-21 104.4 70 74.3
Thhalv10018855m.g Eutrema salsugineum HOM05D005808 ORTHO05D006196 3.8e-21 104.4 70 77.1
Ciclev10008917m.g Citrus clementina HOM05D005808 ORTHO05D006196 5.0e-21 104.0 70 75.7
Gohir.A05G007600 Gossypium hirsutum HOM05D005808 ORTHO05D006196 5.0e-21 104.0 70 74.3
Gohir.D05G008500 Gossypium hirsutum HOM05D005808 ORTHO05D006196 5.0e-21 104.0 70 74.3
Gorai.009G008600 Gossypium raimondii HOM05D005808 ORTHO05D006196 5.0e-21 104.0 70 74.3
Sp5g28220 Schrenkiella parvula HOM05D005808 ORTHO05D006196 5.0e-21 104.0 66 80.3
TPR.G18676 Trifolium pratense HOM05D005808 ORTHO05D006196 5.0e-21 104.0 70 74.3
CiPaw.15G163400 Carya illinoinensis HOM05D005808 ORTHO05D006196 6.6e-21 103.6 70 72.9
Ca_07714_v3 Cicer arietinum L. HOM05D005808 ORTHO05D006196 6.6e-21 103.6 70 74.3
Glyma.09G280100 Glycine max HOM05D005808 ORTHO05D006196 6.6e-21 103.6 70 75.7
Manes.04G001000 Manihot esculenta HOM05D005808 ORTHO05D006196 6.6e-21 103.6 70 72.9
Sp1g15980 Schrenkiella parvula HOM05D005808 ORTHO05D006196 6.6e-21 103.6 70 75.7
CSS0038851 Camellia sinensis var. sinensis HOM05D005808 ORTHO05D006196 8.6e-21 103.2 70 75.7
Carub.0001s1762 Capsella rubella HOM05D005808 ORTHO05D006196 8.6e-21 103.2 70 75.7
Lj6g0026768 Lotus japonicus HOM05D005808 ORTHO05D006196 8.6e-21 103.2 70 72.9
Sc18g0003190 Simmondsia chinensis HOM05D005808 ORTHO05D006196 8.6e-21 103.2 70 75.7
TAR383G0114 Trochodendron aralioides HOM05D005808 ORTHO05D006196 8.6e-21 103.2 70 71.4
arahy.Tifrunner.gnm1.ann1.R51DI5 Arachis hypogaea HOM05D005808 ORTHO05D006196 1.1e-20 102.8 70 72.9
Psat0s2845g0200 Pisum sativum HOM05D005808 ORTHO05D006196 1.5e-20 102.4 70 72.9
Potri.018G101700 Populus trichocarpa HOM05D005808 ORTHO05D006196 1.5e-20 102.4 69 76.8
CARHR018500 Cardamine hirsuta HOM05D005808 ORTHO05D006196 1.9e-20 102.1 70 75.7
Actinidia12360 Actinidia chinensis HOM05D005808 ORTHO05D006196 2.5e-20 101.7 66 75.8
AL1G30250 Arabidopsis lyrata HOM05D005808 ORTHO05D006196 2.5e-20 101.7 70 75.7
AT1G17890 Arabidopsis thaliana HOM05D005808 ORTHO05D006196 2.5e-20 101.7 70 75.7
AUR62028366 Chenopodium quinoa HOM05D005808 ORTHO05D006196 2.5e-20 101.7 70 75.7
Thhalv10008184m.g Eutrema salsugineum HOM05D005808 ORTHO05D006196 2.5e-20 101.7 70 74.3
Glyma.18G208900 Glycine max HOM05D005808 ORTHO05D006196 2.5e-20 101.7 70 75.7
TWI34G0184 Tripterygium wilfordii HOM05D005808 ORTHO05D006196 2.5e-20 101.7 70 72.9
Lj1g0001762 Lotus japonicus HOM05D005808 ORTHO05D006196 3.3e-20 101.3 70 70.0
Phvul.008G090200 Phaseolus vulgaris HOM05D005808 ORTHO05D006196 3.3e-20 101.3 70 74.3
Zm00001eb388990 Zea mays HOM05D005808 ORTHO05D006196 3.3e-20 101.3 70 70.0
Aa31LG7G2700 Aethionema arabicum HOM05D005808 ORTHO05D006196 4.2e-20 100.9 70 71.4
AL2G33020 Arabidopsis lyrata HOM05D005808 ORTHO05D006196 4.2e-20 100.9 71 73.2
BcaB07g34013 Brassica carinata HOM05D005808 ORTHO05D006196 4.2e-20 100.9 70 71.4
C05p16270 Brassica napus HOM05D005808 ORTHO05D006196 4.2e-20 100.9 70 71.4
BolC5t30329H Brassica oleracea HOM05D005808 ORTHO05D006196 4.2e-20 100.9 70 71.4
Sabra18G0087400 Salix brachista HOM05D005808 ORTHO05D006196 4.2e-20 100.9 69 75.4
EL10Ac8g18896 Beta vulgaris HOM05D005808 ORTHO05D006196 5.5e-20 100.5 70 74.3
CARHR066260 Cardamine hirsuta HOM05D005808 ORTHO05D006196 5.5e-20 100.5 66 78.8
CiPaw.16G105900 Carya illinoinensis HOM05D005808 ORTHO05D006196 5.5e-20 100.5 69 72.5
ECA233G5554 Erigeron canadensis HOM05D005808 ORTHO05D006196 5.5e-20 100.5 66 75.8
Medtr7g108490 Medicago truncatula HOM05D005808 ORTHO05D006196 5.5e-20 100.5 70 72.9
PSO063G5527 Papaver somniferum HOM05D005808 ORTHO05D006196 5.5e-20 100.5 69 69.6
AT1G73250 Arabidopsis thaliana HOM05D005808 ORTHO05D006196 7.2e-20 100.1 71 71.8
BcaB03g15037 Brassica carinata HOM05D005808 ORTHO05D006196 7.2e-20 100.1 66 77.3
BcaC08g46743 Brassica carinata HOM05D005808 ORTHO05D006196 7.2e-20 100.1 66 77.3
A07p39200 Brassica napus HOM05D005808 ORTHO05D006196 7.2e-20 100.1 66 77.3
C06p47390 Brassica napus HOM05D005808 ORTHO05D006196 7.2e-20 100.1 66 77.3
BolC6t39778H Brassica oleracea HOM05D005808 ORTHO05D006196 7.2e-20 100.1 66 77.3
Lj9A723T41 Lonicera japonica HOM05D005808 ORTHO05D006196 7.2e-20 100.1 66 72.7
Lj9C724T6 Lonicera japonica HOM05D005808 ORTHO05D006196 7.2e-20 100.1 66 72.7
VMungo1383G1013 Vigna mungo HOM05D005808 ORTHO05D006196 7.2e-20 100.1 70 72.9
A06p13950 Brassica napus HOM05D005808 ORTHO05D006196 9.5e-20 99.8 70 70.0
BraA06t24535Z Brassica rapa HOM05D002264 ORTHO05D002413 9.5e-20 99.8 70 70.0
PSO782G2734 Papaver somniferum HOM05D005808 ORTHO05D006196 9.5e-20 99.8 69 71.0
SHI02828 Sapria himalayana HOM05D005808 ORTHO05D006196 9.5e-20 99.8 70 71.4
DCAR_024732 Daucus carota HOM05D005808 ORTHO05D006196 1.2e-19 99.4 66 71.2
BraA07t31469Z Brassica rapa HOM05D005808 ORTHO05D006196 1.6e-19 99.0 66 77.3
Nitab4.5_0001036g0010 Nicotiana tabacum HOM05D005808 ORTHO05D006196 1.6e-19 99.0 66 72.7
ATR0332G026 Amborella trichopoda HOM05D005808 ORTHO05D006196 2.1e-19 98.6 70 71.4
Dinv42807 Davidia involucrata HOM05D005808 ORTHO05D006196 3.6e-19 97.8 61 77.0
Dinv43294 Davidia involucrata HOM05D005808 ORTHO05D006196 3.6e-19 97.8 61 77.0
CDE11G1052 Ceratophyllum demersum HOM05D005808 ORTHO05D006196 4.7e-19 97.4 70 71.4
AUR62025384 Chenopodium quinoa HOM05D005808 ORTHO05D006196 4.7e-19 97.4 70 71.4
SEGI_01162 Sequoiadendron giganteum HOM05D005808 ORTHO05D006196 4.7e-19 97.4 70 70.0
Cc06_g14220 Coffea canephora HOM05D005808 ORTHO05D006196 6.1e-19 97.1 66 75.8
Migut.J01400 Erythranthe guttata HOM05D005808 ORTHO05D006196 6.1e-19 97.1 66 74.2
Os06g0652400 Oryza sativa ssp. japonica HOM05D005808 ORTHO05D006196 6.1e-19 97.1 70 68.6
Rhsim01G0021100 Rhododendron simsii HOM05D000821 ORTHO05D006196 8.0e-19 96.7 69 69.6
MSTRG.6169 Avicennia marina HOM05D005808 ORTHO05D006196 1.4e-18 95.9 66 72.7
Solyc07g006070.1 Solanum lycopersicum HOM05D005808 ORTHO05D006196 2.3e-18 95.1 66 71.2
Sopen07g002190 Solanum pennellii HOM05D005808 ORTHO05D006196 2.3e-18 95.1 66 71.2
unitig_748.g7192 Utricularia gibba HOM05D005808 ORTHO05D006196 3.0e-18 94.7 65 72.3
PGSC0003DMG400011158 Solanum tuberosum HOM05D005808 ORTHO05D006196 4.0e-18 94.4 66 71.2
Nitab4.5_0002809g0070 Nicotiana tabacum HOM05D005808 ORTHO05D006196 5.2e-18 94.0 66 68.2
Peaxi162Scf00038g00063 Petunia axillaris HOM05D005808 ORTHO05D006196 5.2e-18 94.0 66 69.7
A08p30670 Brassica napus HOM05D002264 ORTHO05D002413 6.8e-18 93.6 65 69.2
HanXRQChr06g0170251 Helianthus annuus HOM05D005808 ORTHO05D006196 6.8e-18 93.6 66 69.7
BcaC07g38879 Brassica carinata HOM05D000226 ORTHO05D006196 1.5e-17 92.4 61 75.4
SalBow6G0126 Salvia bowleyana HOM05D005808 ORTHO05D006196 2.0e-17 92.0 66 72.7
Os06g0652300 Oryza sativa ssp. japonica HOM05D005808 ORTHO05D006196 5.7e-17 90.5 71 63.4
HanXRQChr15g0468821 Helianthus annuus HOM05D005808 ORTHO05D006196 7.5e-17 90.1 66 66.7
SGA_v2.0_scaffold45G17002 Striga asiatica HOM05D005808 ORTHO05D006196 1.3e-16 89.4 66 65.2
Lsat_1_v5_gn_5_72880 Lactuca sativa HOM05D005808 ORTHO05D006196 1.7e-16 89.0 66 66.7
SGA_v2.0_scaffold265G46071 Striga asiatica HOM05D005808 ORTHO05D006196 1.7e-16 89.0 66 65.2
AagrBONN_evm.TU.Sc2ySwM_228.3310 Anthoceros agrestis HOM05D005808 ORTHO05D006196 2.8e-16 88.2 66 63.6
CBR_g8654 Chara braunii HOM05D005808 ORTHO05D006196 3.2e-15 84.7 66 65.2
SMO143G0303 Selaginella moellendorffii HOM05D005808 ORTHO05D006196 3.2e-15 84.7 66 63.6
MBI14_g16421_MAGBIO Magnolia biondii HOM05D005808 ORTHO05D006196 4.1e-15 84.3 70 61.4
Pp3c10_6390 Physcomitrium patens HOM05D005808 ORTHO05D006196 4.1e-15 84.3 66 63.6
Mapoly0064s0048 Marchantia polymorpha HOM05D005808 ORTHO05D006196 4.6e-14 80.9 66 59.1
Actinidia25650 Actinidia chinensis HOM05D005808 ORTHO05D006196 2.9e-13 78.2 58 67.2
CAN.G1190.16 Capsicum annuum HOM05D005808 ORTHO05D006196 7.3e-12 73.6 67 56.7


User provided reference genes

Program Settings