Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 2.2e-76 288.9 149 100.0
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 6.5e-76 287.3 149 99.3
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 1.1e-70 270.0 149 83.2
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 1.4e-70 269.6 148 85.1
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 2.7e-69 265.4 152 80.9
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.7e-68 262.7 149 82.6
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 2.3e-68 262.3 149 81.9
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 3.8e-68 261.5 151 79.5
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 2.5e-67 258.8 149 79.9
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 2.1e-66 255.8 150 80.7
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 2.1e-66 255.8 150 80.7
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 2.8e-66 255.4 150 81.3
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 3.6e-66 255.0 152 79.6
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 1.4e-65 253.1 152 82.2
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 1.8e-65 252.7 148 79.7
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 1.8e-65 252.7 149 79.2
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 3.0e-65 251.9 150 79.3
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 3.0e-65 251.9 150 78.7
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 5.2e-65 251.1 150 79.3
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 1.2e-64 250.0 149 79.2
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 5.7e-64 247.7 151 79.5
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.3e-63 246.5 150 77.3
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 1.3e-63 246.5 150 77.3
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 2.8e-63 245.4 149 77.2
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 3.1e-62 241.9 146 77.4
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 4.1e-62 241.5 147 76.2
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 7.0e-62 240.7 147 76.2
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 5.9e-61 237.7 147 77.6
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 6.6e-60 234.2 147 75.5
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 1.1e-59 233.4 147 74.8
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 1.9e-59 232.6 149 72.5
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 3.3e-59 231.9 150 74.0
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 5.6e-59 231.1 149 75.2
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 7.3e-59 230.7 151 76.8
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 9.5e-59 230.3 150 74.0
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.2e-58 229.9 156 78.2
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 2.8e-58 228.8 157 77.7
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 4.7e-58 228.0 147 74.1
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 4.0e-57 224.9 150 72.0
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 4.0e-57 224.9 149 69.1
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 6.8e-57 224.2 159 76.7
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 2.6e-56 222.2 150 70.7
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 2.6e-56 222.2 147 72.8
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 5.7e-56 221.1 147 72.1
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 9.8e-56 220.3 147 71.4
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 6.4e-55 217.6 149 69.1
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 1.4e-54 216.5 147 70.7
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 1.4e-54 216.5 146 68.5
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 1.4e-54 216.5 146 71.2
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 1.8e-54 216.1 145 70.3
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 1.8e-54 216.1 141 75.2
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 2.4e-54 215.7 149 71.8
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 3.2e-54 215.3 140 72.9
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 3.2e-54 215.3 146 69.9
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 7.0e-54 214.2 149 69.1
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 7.0e-54 214.2 152 69.1
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 7.0e-54 214.2 145 71.7
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 7.0e-54 214.2 149 69.8
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 1.6e-53 213.0 144 70.8
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 1.6e-53 213.0 146 69.2
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 3.5e-53 211.8 149 67.8
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 4.6e-53 211.5 156 65.4
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 6.0e-53 211.1 149 68.5
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 3.9e-52 208.4 150 67.3
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 2.5e-51 205.7 154 66.9
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 5.6e-51 204.5 154 66.2
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 9.5e-51 203.8 149 66.4
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 4.0e-49 198.4 136 81.6
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 1.5e-48 196.4 147 63.9
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 1.2e-45 186.8 143 65.0
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 1.6e-45 186.4 149 63.8
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 1.6e-45 186.4 134 67.2
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 1.3e-44 183.3 132 68.2
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 8.1e-42 174.1 150 57.3
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 1.7e-39 166.4 146 55.5
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 2.2e-39 166.0 151 54.3
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 2.9e-39 165.6 146 55.5
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 3.7e-39 165.2 146 54.8
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 3.7e-39 165.2 146 54.8
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 6.4e-39 164.5 146 54.8
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 6.4e-39 164.5 146 54.8
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 1.9e-38 162.9 146 56.2
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 1.6e-37 159.8 138 56.5
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 2.7e-37 159.1 138 56.5
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 3.5e-37 158.7 146 54.1
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 3.5e-37 158.7 138 56.5
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 4.6e-37 158.3 138 56.5
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 7.8e-37 157.5 152 52.6
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.1e-35 153.7 112 64.3
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 1.8e-33 146.4 78 89.7
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 1.9e-30 136.3 138 49.3
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 7.1e-30 134.4 128 53.9
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 3.3e-27 125.6 76 78.9
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 2.1e-26 122.9 74 74.3
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 1.2e-21 107.1 62 74.2
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 1.6e-21 106.7 71 76.1
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 7.6e-16 87.8 119 38.7
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 4.9e-15 85.1 119 38.7


User provided reference genes

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