Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 1.3e-85 319.7 165 100.0
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 1.3e-80 303.1 165 95.2
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 2.8e-51 205.7 182 69.2
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 6.8e-50 201.1 171 69.6
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.2e-41 173.7 169 61.5
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 7.1e-39 164.5 173 60.1
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 9.2e-39 164.1 162 61.1
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 1.0e-37 160.6 161 61.5
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.0e-37 160.6 161 61.5
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 1.1e-36 157.1 185 56.8
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 1.5e-36 156.8 178 57.9
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 1.6e-35 153.3 185 55.1
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 2.1e-35 152.9 174 55.2
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 4.0e-34 148.7 172 56.4
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 1.2e-33 147.1 128 68.8
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 3.4e-33 145.6 114 71.9
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 3.4e-33 145.6 114 71.9
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 1.2e-30 137.1 178 52.2
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.6e-30 136.7 165 54.5
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 2.1e-30 136.3 167 53.9
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 2.7e-30 136.0 111 69.4
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 2.7e-30 136.0 186 51.6
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 3.5e-30 135.6 182 50.0
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 1.3e-29 133.7 117 66.7
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 1.3e-29 133.7 117 66.7
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 1.3e-29 133.7 117 66.7
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 2.3e-29 132.9 173 52.0
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 2.3e-29 132.9 179 51.4
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 3.0e-29 132.5 100 71.0
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 6.6e-29 131.3 169 50.9
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 6.6e-29 131.3 162 53.1
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 1.5e-28 130.2 180 51.7
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 1.5e-28 130.2 179 52.0
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.5e-28 130.2 173 49.7
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 1.9e-28 129.8 177 48.6
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.9e-28 129.8 102 68.6
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.9e-28 129.8 125 59.2
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 1.9e-28 129.8 98 71.4
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 2.5e-28 129.4 177 52.5
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 3.3e-28 129.0 87 78.2
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 4.3e-28 128.6 184 47.3
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 5.6e-28 128.3 184 48.4
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 7.3e-28 127.9 162 50.6
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 7.3e-28 127.9 164 50.0
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 7.3e-28 127.9 178 48.9
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 7.3e-28 127.9 169 49.7
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 9.6e-28 127.5 92 75.0
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 1.3e-27 127.1 105 67.6
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 1.6e-27 126.7 182 48.9
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 1.6e-27 126.7 173 49.1
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 2.1e-27 126.3 174 49.4
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 2.8e-27 125.9 164 51.2
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 6.2e-27 124.8 173 49.1
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 6.2e-27 124.8 113 64.6
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 6.2e-27 124.8 169 52.1
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 8.1e-27 124.4 176 48.9
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 8.1e-27 124.4 113 63.7
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 2.4e-26 122.9 121 60.3
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 2.4e-26 122.9 112 67.0
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 2.4e-26 122.9 112 67.0
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 2.4e-26 122.9 112 67.0
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 3.1e-26 122.5 166 48.2
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 4.0e-26 122.1 76 84.2
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 6.9e-26 121.3 134 55.2
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 9.0e-26 120.9 92 69.6
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 9.0e-26 120.9 161 50.3
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 9.0e-26 120.9 176 50.0
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 9.0e-26 120.9 162 55.6
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 1.5e-25 120.2 175 50.3
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 1.5e-25 120.2 94 72.3
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 2.0e-25 119.8 152 53.9
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 2.0e-25 119.8 160 50.0
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 2.6e-25 119.4 68 88.2
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 3.4e-25 119.0 186 48.4
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 4.5e-25 118.6 106 66.0
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 5.8e-25 118.2 93 71.0
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 5.8e-25 118.2 163 50.3
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 5.8e-25 118.2 155 52.9
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 5.8e-25 118.2 121 60.3
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 7.6e-25 117.9 95 69.5
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 9.9e-25 117.5 161 49.1
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 1.3e-24 117.1 167 49.1
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 1.7e-24 116.7 133 55.6
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 2.9e-24 115.9 172 47.7
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 8.4e-24 114.4 66 84.8
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 8.4e-24 114.4 157 47.8
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 1.1e-23 114.0 148 50.0
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 3.2e-23 112.5 96 64.6
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 3.2e-23 112.5 171 45.0
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 5.4e-23 111.7 95 68.4
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 9.3e-23 110.9 67 82.1
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 3.5e-22 109.0 107 55.1
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 4.6e-22 108.6 78 74.4
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 4.6e-22 108.6 177 45.2
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 8.7e-21 104.4 74 77.0
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 1.6e-19 100.1 149 46.3
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 9.0e-18 94.4 60 76.7
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 3.4e-17 92.4 151 43.7
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 9.9e-17 90.9 64 70.3
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 9.3e-15 84.3 84 53.6
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 8.7e-13 77.8 109 44.0
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.1e-12 77.4 66 59.1
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 1.3e-11 73.9 101 48.5
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 6.2e-11 71.6 140 41.4
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 2.0e-09 66.6 103 40.8
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 6.5e-08 61.6 124 39.5


User provided reference genes

Program Settings