Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00780 Corylus avellana HOM05D006126 ORTHO05D034891 3.2e-37 157.9 80 100.0
Haze_00785 Corylus avellana HOM05D006126 ORTHO05D034891 3.2e-37 157.9 80 100.0
Cfa020070 Carpinus fangiana HOM05D006126 ORTHO05D007792 1.7e-30 135.6 86 83.7
Haze_20125 Corylus avellana HOM05D006126 ORTHO05D007792 2.9e-30 134.8 86 83.7
CiPaw.09G023900 Carya illinoinensis HOM05D006126 ORTHO05D007792 1.5e-23 112.5 86 72.1
QL07p026395 Quercus lobata HOM05D006126 ORTHO05D007792 1.5e-13 79.3 78 60.3
TAR633G2701 Trochodendron aralioides HOM05D006126 ORTHO05D007792 3.2e-13 78.2 80 60.0
Prupe.7G089400 Prunus persica HOM05D006126 ORTHO05D007792 9.4e-13 76.6 82 58.5
MD14G1044400 Malus domestica HOM05D006126 ORTHO05D007792 6.7e-11 70.5 76 57.9
DCAR_013459 Daucus carota HOM05D006126 ORTHO05D007792 2.0e-10 68.9 72 61.1
Cpa.g.sc222.16 Carica papaya HOM05D006126 ORTHO05D007792 3.3e-10 68.2 67 64.2
ClCG10G017990 Citrullus lanatus HOM05D006126 ORTHO05D007792 4.4e-10 67.8 70 55.7
Dinv11896 Davidia involucrata HOM05D006126 ORTHO05D007792 4.4e-10 67.8 74 59.5
Thecc.05G109900 Theobroma cacao HOM05D006126 ORTHO05D007792 9.7e-10 66.6 81 54.3
Potri.016G066000 Populus trichocarpa HOM05D006126 ORTHO05D007792 1.3e-09 66.2 62 67.7
Manes.08G037100 Manihot esculenta HOM05D006126 ORTHO05D007792 2.2e-09 65.5 86 54.7
FAN05G2399 Fragaria x ananassa HOM05D006126 ORTHO05D007792 2.8e-09 65.1 72 58.3
FAN05G1377 Fragaria x ananassa HOM05D006126 ORTHO05D007792 4.8e-09 64.3 72 58.3
FvH4_6g21000 Fragaria vesca HOM05D006126 ORTHO05D007792 6.3e-09 63.9 72 58.3
FAN09G1524 Fragaria x ananassa HOM05D006126 ORTHO05D007792 6.3e-09 63.9 72 58.3
FAN14G0373 Fragaria x ananassa HOM05D006126 ORTHO05D007792 6.3e-09 63.9 72 58.3
Sabra16G0067300 Salix brachista HOM05D006126 ORTHO05D007792 8.2e-09 63.5 85 50.6
RcHm_v2.0_Chr3g0477381 Rosa chinensis HOM05D006126 ORTHO05D007792 1.1e-08 63.2 62 59.7
RcHm_v2.0_Chr7g0212011 Rosa chinensis HOM05D006126 ORTHO05D007792 1.1e-08 63.2 64 59.4
CsaV3_3G038300 Cucumis sativus L. HOM05D006126 ORTHO05D007792 2.4e-08 62.0 70 52.9
COL.COLO4_29497 Corchorus olitorius HOM05D006126 ORTHO05D007792 5.3e-08 60.8 81 50.6
Sed0001019 Sechium edule HOM05D006126 ORTHO05D007792 5.3e-08 60.8 69 53.6
TWI53G0494 Tripterygium wilfordii HOM05D006126 ORTHO05D007792 9.1e-08 60.1 94 46.8
CANSAT64G0080 Cannabis sativa HOM05D006126 ORTHO05D007792 1.2e-07 59.7 61 60.7
CSS0003927 Camellia sinensis var. sinensis HOM05D006126 ORTHO05D007792 1.6e-07 59.3 56 66.1
CSS0033902 Camellia sinensis var. sinensis HOM05D006126 ORTHO05D007792 1.6e-07 59.3 56 66.1
Phvul.007G265400 Phaseolus vulgaris HOM05D006126 ORTHO05D007792 1.6e-07 59.3 86 51.2
Glyma.02G188200 Glycine max HOM05D006126 ORTHO05D007792 2.0e-07 58.9 56 66.1
vmacro07510 Vaccinium macrocarpon HOM05D006126 ORTHO05D007792 2.0e-07 58.9 61 60.7
Ah.12g059600 Amaranthus hybridus HOM05D006126 ORTHO05D007792 2.7e-07 58.5 44 70.5
MELO3C009571.2 Cucumis melo HOM05D006126 ORTHO05D007792 2.7e-07 58.5 69 55.1
THA.LOC104823508 Tarenaya hassleriana HOM05D006126 ORTHO05D007792 2.7e-07 58.5 73 50.7
SGA_v2.0_scaffold184G40037 Striga asiatica HOM05D006126 ORTHO05D007792 3.5e-07 58.2 70 52.9
Actinidia37776 Actinidia chinensis HOM05D006126 ORTHO05D007792 4.5e-07 57.8 81 54.3
A09p66770 Brassica napus HOM05D006126 ORTHO05D007792 4.5e-07 57.8 76 51.3
BraA09t42015Z Brassica rapa HOM05D006126 ORTHO05D007792 4.5e-07 57.8 76 51.3
AUR62036324 Chenopodium quinoa HOM05D006126 ORTHO05D007792 4.5e-07 57.8 47 70.2
Lalb_Chr02g0154231 Lupinus albus HOM05D006126 ORTHO05D007792 4.5e-07 57.8 71 54.9
Nn2g14414 Nelumbo nucifera HOM05D006126 ORTHO05D007792 4.5e-07 57.8 60 60.0
PSO339G3826 Papaver somniferum HOM05D006126 ORTHO05D007792 4.5e-07 57.8 56 58.9
AUR62038430 Chenopodium quinoa HOM05D006126 ORTHO05D007792 5.9e-07 57.4 75 52.0
Sc01g0005650 Simmondsia chinensis HOM05D006126 ORTHO05D007792 5.9e-07 57.4 48 72.9
TWI74G0919 Tripterygium wilfordii HOM05D006126 ORTHO05D034891 5.9e-07 57.4 42 76.2
Ciclev10011230m.g Citrus clementina HOM05D006126 ORTHO05D007792 7.7e-07 57.0 68 54.4
Eucgr.A02546 Eucalyptus grandis HOM05D006126 ORTHO05D007792 7.7e-07 57.0 88 45.5
Glyma.10G086700 Glycine max HOM05D006126 ORTHO05D007792 7.7e-07 57.0 42 78.6
Lj1A1059G39 Lonicera japonica HOM05D006126 ORTHO05D007792 7.7e-07 57.0 95 50.5
Sp1g05550 Schrenkiella parvula HOM05D006126 ORTHO05D007792 7.7e-07 57.0 85 49.4
unitig_578.g16481 Utricularia gibba HOM05D006126 ORTHO05D007792 7.7e-07 57.0 35 82.9
Atru.chr8.1287 Acer truncatum HOM05D006126 ORTHO05D007792 1.0e-06 56.6 79 53.2
C08p50990 Brassica napus HOM05D006126 ORTHO05D007792 1.0e-06 56.6 77 50.6
BolC8t52627H Brassica oleracea HOM05D006126 ORTHO05D007792 1.0e-06 56.6 77 50.6
Psat6g087240 Pisum sativum HOM05D006126 ORTHO05D007792 1.0e-06 56.6 62 59.7
PGSC0003DMG400028224 Solanum tuberosum HOM05D006126 ORTHO05D007792 1.0e-06 56.6 58 65.5
Aa31LG1G7850 Aethionema arabicum HOM05D006126 ORTHO05D007792 1.3e-06 56.2 33 87.9
Aa31LG1G7870 Aethionema arabicum HOM05D006126 ORTHO05D007792 1.3e-06 56.2 33 87.9
EL10Ac5g11809 Beta vulgaris HOM05D006126 ORTHO05D007792 1.7e-06 55.8 40 77.5
ECA247G0804 Erigeron canadensis HOM05D006126 ORTHO05D007792 1.7e-06 55.8 49 69.4
MBI05_g40561_MAGBIO Magnolia biondii HOM05D006126 ORTHO05D007792 1.7e-06 55.8 55 60.0
Peaxi162Scf00203g00033 Petunia axillaris HOM05D006126 ORTHO05D007792 1.7e-06 55.8 37 78.4
Thhalv10007141m.g Eutrema salsugineum HOM05D006126 ORTHO05D007792 2.2e-06 55.5 64 56.2
PSO384G0472 Papaver somniferum HOM05D006126 ORTHO05D007792 2.2e-06 55.5 56 57.1
Potri.006G199600 Populus trichocarpa HOM05D006126 ORTHO05D007792 2.2e-06 55.5 62 54.8
TPR.G21232 Trifolium pratense HOM05D006126 ORTHO05D007792 2.2e-06 55.5 66 51.5
AT1G06820 Arabidopsis thaliana HOM05D006126 ORTHO05D007792 2.9e-06 55.1 86 47.7
CAN.G674.36 Capsicum annuum HOM05D006126 ORTHO05D007792 2.9e-06 55.1 48 68.8
Sopen10g032160 Solanum pennellii HOM05D006126 ORTHO05D007792 2.9e-06 55.1 48 68.8
VMungo0720G2782 Vigna mungo HOM05D006126 ORTHO05D007792 2.9e-06 55.1 86 48.8
arahy.Tifrunner.gnm1.ann1.1KUK4G Arachis hypogaea HOM05D006126 ORTHO05D007792 3.8e-06 54.7 56 60.7
Hund10797 Selenicereus undatus HOM05D006126 ORTHO05D007792 3.8e-06 54.7 75 50.7
Solyc10g081650.2 Solanum lycopersicum HOM05D006126 ORTHO05D007792 3.8e-06 54.7 58 63.8
BcaC07g42047 Brassica carinata HOM05D006126 ORTHO05D007792 5.0e-06 54.3 43 72.1
Migut.L01843 Erythranthe guttata HOM05D006126 ORTHO05D007792 5.0e-06 54.3 35 80.0
AL1G16820 Arabidopsis lyrata HOM05D006126 ORTHO05D007792 6.5e-06 53.9 82 46.3
arahy.Tifrunner.gnm1.ann1.Y9G5AQ Arachis hypogaea HOM05D006126 ORTHO05D007792 6.5e-06 53.9 56 60.7
Gohir.A01G135800 Gossypium hirsutum HOM05D006126 ORTHO05D007792 6.5e-06 53.9 56 62.5
Gohir.D01G122900 Gossypium hirsutum HOM05D006126 ORTHO05D007792 6.5e-06 53.9 53 60.4
Gorai.002G153800 Gossypium raimondii HOM05D006126 ORTHO05D007792 6.5e-06 53.9 53 60.4
Nitab4.5_0000721g0080 Nicotiana tabacum HOM05D006126 ORTHO05D007792 6.5e-06 53.9 37 75.7
Aqoxy2G00644 Aquilegia oxysepala HOM05D006126 ORTHO05D007792 8.5e-06 53.5 85 43.5
HanXRQChr08g0230681 Helianthus annuus HOM05D006126 ORTHO05D007792 8.5e-06 53.5 48 66.7
Lsat_1_v5_gn_9_13960 Lactuca sativa HOM05D006126 ORTHO05D007792 8.5e-06 53.5 85 44.7
Nitab4.5_0004995g0010 Nicotiana tabacum HOM05D006126 ORTHO05D007792 8.5e-06 53.5 37 73.0


User provided reference genes

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