Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00770 Corylus avellana HOM05D000023 ORTHO05D000014 4.2e-153 544.7 278 100.0
CiPaw.01G129600 Carya illinoinensis HOM05D000023 ORTHO05D000014 1.6e-38 164.1 840 25.4
Nitab4.5_0001720g0040 Nicotiana tabacum HOM05D000023 ORTHO05D000014 7.2e-36 155.2 450 31.1
vmacro08604 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 3.6e-35 152.9 323 40.2
QL06p014182 Quercus lobata HOM05D000023 ORTHO05D000014 3.0e-34 149.8 264 40.9
Lj6A700T88 Lonicera japonica HOM05D000023 ORTHO05D000014 5.7e-33 145.6 147 53.7
MELO3C006750.2 Cucumis melo HOM05D000023 ORTHO05D000014 2.3e-29 133.7 266 36.1
GSVIVG01017686001 Vitis vinifera HOM05D000023 ORTHO05D000014 2.9e-29 133.3 263 36.9
Sed0003236 Sechium edule HOM05D000023 ORTHO05D000014 5.0e-29 132.5 266 35.7
SGA_v2.0_scaffold64G22025 Striga asiatica HOM05D000023 ORTHO05D000014 6.6e-29 132.1 176 46.0
CsaV3_3G015520 Cucumis sativus L. HOM05D000023 ORTHO05D000014 8.6e-29 131.7 266 36.1
Haze_05130 Corylus avellana HOM05D007572 ORTHO05D009535 2.5e-28 130.2 312 37.8
COL.COLO4_23146 Corchorus olitorius HOM05D000023 ORTHO05D000014 3.0e-26 123.2 167 47.3
Prupe.1G105600 Prunus persica HOM05D000023 ORTHO05D000014 1.7e-24 117.5 268 35.1
MBI19_g32734_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.1e-23 114.8 195 42.1
ClCG05G006860 Citrullus lanatus HOM05D000023 ORTHO05D000014 3.5e-22 109.8 281 31.3
MD13G1139200 Malus domestica HOM05D000023 ORTHO05D000014 4.5e-22 109.4 268 33.6
Oeu037628.1 Olea europaea HOM05D000023 ORTHO05D000014 4.5e-22 109.4 266 32.3
CDE06G2340 Ceratophyllum demersum HOM05D000023 ORTHO05D000014 7.8e-22 108.6 346 32.4
Rhsim04G0165800 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.9e-21 106.7 262 32.1
Cc03_g00140 Coffea canephora HOM05D000023 ORTHO05D000014 8.6e-21 105.1 268 33.2
Oeu022707.2 Olea europaea HOM05D000023 ORTHO05D000014 1.9e-20 104.0 263 32.7
MSTRG.10183 Avicennia marina HOM05D000023 ORTHO05D000014 2.5e-20 103.6 259 32.0
FvH4_4g21491 Fragaria vesca HOM05D000023 ORTHO05D000014 5.6e-20 102.4 225 35.1
Ciclev10004312m.g Citrus clementina HOM05D000023 ORTHO05D000014 3.6e-19 99.8 269 31.6
Thecc.04G312700 Theobroma cacao HOM05D000023 ORTHO05D000014 4.7e-19 99.4 264 33.0
Ah.13g073040 Amaranthus hybridus HOM05D000023 ORTHO05D000014 1.8e-18 97.4 259 31.7
RcHm_v2.0_Chr4g0427461 Rosa chinensis HOM05D000023 ORTHO05D000014 4.0e-18 96.3 259 31.3
MD16G1136600 Malus domestica HOM05D000023 ORTHO05D000014 2.0e-17 94.0 268 32.1
Atru.chr4.3145 Acer truncatum HOM05D000023 ORTHO05D000014 5.8e-17 92.4 268 34.0
CANSAT80G1619 Cannabis sativa HOM05D000023 ORTHO05D000014 5.8e-17 92.4 227 34.4
EL10Ac3g06256 Beta vulgaris HOM05D000023 ORTHO05D000014 7.5e-17 92.0 260 30.0
Hma1.2p1_0013F.1_g007920 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.3e-16 91.3 267 31.5
Potri.002G188400 Populus trichocarpa HOM05D000023 ORTHO05D000014 1.3e-16 91.3 260 31.9
Cpa.g.sc519.2 Carica papaya HOM05D000023 ORTHO05D000014 1.7e-16 90.9 260 32.3
Sc25g0002160 Simmondsia chinensis HOM05D000023 ORTHO05D000014 2.9e-16 90.1 262 30.2
Sabra14G0084200 Salix brachista HOM05D000023 ORTHO05D000014 3.7e-16 89.7 260 31.5
Thecc.01G323700 Theobroma cacao HOM05D000023 ORTHO05D000014 4.9e-16 89.4 261 31.4
AUR62002557 Chenopodium quinoa HOM05D000023 ORTHO05D000014 6.4e-16 89.0 266 30.8
AUR62029977 Chenopodium quinoa HOM05D000023 ORTHO05D000014 1.4e-15 87.8 274 29.9
Ciclev10024195m.g Citrus clementina HOM05D000023 ORTHO05D000014 2.4e-15 87.0 259 29.7
Atru.chr5.885 Acer truncatum HOM05D000023 ORTHO05D000014 4.1e-15 86.3 266 30.1
Atru.chr5.888 Acer truncatum HOM05D000023 ORTHO05D000014 4.1e-15 86.3 266 30.1
Ca_02356_v3 Cicer arietinum L. HOM05D000023 ORTHO05D000014 5.4e-15 85.9 225 32.0
Lalb_Chr23g0276071 Lupinus albus HOM05D000023 ORTHO05D000014 5.4e-15 85.9 226 31.9
VMungo1309G1890 Vigna mungo HOM05D000023 ORTHO05D000014 7.0e-15 85.5 264 30.3
Duzib133G0799 Durio zibethinus HOM05D000023 ORTHO05D000014 9.2e-15 85.1 260 30.8
A01p36900 Brassica napus HOM05D000023 ORTHO05D000014 1.2e-14 84.7 84 54.8
C01p46790 Brassica napus HOM05D000023 ORTHO05D000014 1.2e-14 84.7 84 54.8
BolC1t04652H Brassica oleracea HOM05D000023 ORTHO05D000014 1.2e-14 84.7 84 54.8
BraA01t03749Z Brassica rapa HOM05D000023 ORTHO05D000014 1.2e-14 84.7 84 54.8
TWI09G0737 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 2.7e-14 83.6 261 30.3
THA.LOC104802620 Tarenaya hassleriana HOM05D000023 ORTHO05D000014 4.6e-14 82.8 89 51.7
Aa31LG8G4400 Aethionema arabicum HOM05D000023 ORTHO05D000014 6.0e-14 82.4 84 52.4
Thhalv10020031m.g Eutrema salsugineum HOM05D000023 ORTHO05D000014 6.0e-14 82.4 84 52.4
Glyma.15G187500 Glycine max HOM05D000023 ORTHO05D000014 6.0e-14 82.4 263 29.7
Potri.014G114100 Populus trichocarpa HOM05D000023 ORTHO05D000014 6.0e-14 82.4 259 29.3
Sp3g15620 Schrenkiella parvula HOM05D000023 ORTHO05D000014 6.0e-14 82.4 84 52.4
Psat1g017480 Pisum sativum HOM05D000023 ORTHO05D000014 7.8e-14 82.0 225 30.7
CDE04G3714 Ceratophyllum demersum HOM05D000023 ORTHO05D000014 1.0e-13 81.6 209 35.4
CARHR092770 Cardamine hirsuta HOM05D000023 ORTHO05D000014 1.3e-13 81.3 84 51.2
Migut.O00402 Erythranthe guttata HOM05D000023 ORTHO05D000014 1.3e-13 81.3 265 27.2
MBI18_g10388_MAGBIO Magnolia biondii HOM05D000023 ORTHO05D000014 1.3e-13 81.3 86 51.2
TPR.G24695 Trifolium pratense HOM05D000023 ORTHO05D000014 2.3e-13 80.5 226 32.3
Glyma.09G079100 Glycine max HOM05D000023 ORTHO05D000014 3.9e-13 79.7 225 32.0
CSS0008819 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 8.6e-13 78.6 86 50.0
Peaxi162Scf00470g00028 Petunia axillaris HOM05D000023 ORTHO05D000014 1.1e-12 78.2 145 41.4
Aqoxy5G02793 Aquilegia oxysepala HOM05D000023 ORTHO05D000014 1.5e-12 77.8 86 52.3
Gohir.A12G120650 Gossypium hirsutum HOM05D000023 ORTHO05D000014 1.5e-12 77.8 82 52.4
Lj6g0007513 Lotus japonicus HOM05D000023 ORTHO05D000014 1.5e-12 77.8 225 30.2
Nitab4.5_0000098g0210 Nicotiana tabacum HOM05D000023 ORTHO05D000014 3.3e-12 76.6 207 30.9
Gohir.D12G124401 Gossypium hirsutum HOM05D000023 ORTHO05D000014 5.6e-12 75.9 82 51.2
Gorai.008G135400 Gossypium raimondii HOM05D000023 ORTHO05D000014 5.6e-12 75.9 82 51.2
AL3G30530 Arabidopsis lyrata HOM05D000023 ORTHO05D000014 1.2e-11 74.7 83 48.2
AT3G17450 Arabidopsis thaliana HOM05D000023 ORTHO05D000014 1.2e-11 74.7 83 48.2
PGR042G0167 Punica granatum HOM05D000023 ORTHO05D000014 1.2e-11 74.7 81 50.6
arahy.Tifrunner.gnm1.ann1.W645MI Arachis hypogaea HOM05D000023 ORTHO05D000014 6.2e-11 72.4 305 26.2
Manes.01G233700 Manihot esculenta HOM05D000023 ORTHO05D000014 6.2e-11 72.4 260 28.1
Sabra02G0166900 Salix brachista HOM05D000023 ORTHO05D000014 6.2e-11 72.4 83 49.4
ECA233G3146 Erigeron canadensis HOM05D000023 ORTHO05D000014 8.0e-11 72.0 86 47.7
Eucgr.B02527 Eucalyptus grandis HOM05D000023 ORTHO05D000014 1.8e-10 70.9 271 27.3
arahy.Tifrunner.gnm1.ann1.GKHQ6E Arachis hypogaea HOM05D000023 ORTHO05D000014 4.0e-10 69.7 307 25.4
DCAR_023406 Daucus carota HOM05D000023 ORTHO05D000014 5.2e-10 69.3 72 52.8
Oeu037629.1 Olea europaea HOM05D000023 ORTHO05D000014 2.9e-08 63.5 56 62.5
PSO170G4534 Papaver somniferum HOM05D000023 ORTHO05D000014 4.9e-08 62.8 111 40.5
HanXRQChr17g0565901 Helianthus annuus HOM05D000023 ORTHO05D000014 6.4e-08 62.4 233 27.9
PSO357G0624 Papaver somniferum HOM05D000023 ORTHO05D000014 1.4e-07 61.2 111 39.6
Dinv18021 Davidia involucrata HOM05D000023 ORTHO05D000014 1.9e-07 60.8 227 29.1
TAR636G1955 Trochodendron aralioides HOM05D007572 ORTHO05D009535 9.2e-07 58.5 135 32.6
TAR365G0305 Trochodendron aralioides HOM05D007572 ORTHO05D009535 2.1e-06 57.4 87 44.8
Migut.G00001 Erythranthe guttata HOM05D000023 ORTHO05D000014 4.6e-06 56.2 37 62.2


User provided reference genes

Program Settings