Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00727 Corylus avellana HOM05D002737 ORTHO05D005828 7.9e-64 247.3 158 100.0
Haze_23327 Corylus avellana HOM05D002737 ORTHO05D005828 9.8e-46 187.2 149 82.6
Haze_00725 Corylus avellana HOM05D002737 ORTHO05D005828 1.8e-44 183.0 156 78.2
Haze_00729 Corylus avellana HOM05D002737 ORTHO05D005828 2.7e-43 179.1 156 78.2
CiPaw.14G096400 Carya illinoinensis HOM05D002737 ORTHO05D005828 5.6e-25 118.2 156 48.7
Cfa026041 Carpinus fangiana HOM05D002737 ORTHO05D005828 7.0e-20 101.3 90 80.0
CiPaw.13G131400 Carya illinoinensis HOM05D002737 ORTHO05D005828 2.0e-19 99.8 157 43.9
RcHm_v2.0_Chr2g0115601 Rosa chinensis HOM05D002737 ORTHO05D005828 9.5e-17 90.9 146 51.4
Hma1.2p1_0793F.1_g218640 Hydrangea macrophylla HOM05D002737 ORTHO05D005828 1.8e-15 86.7 158 41.8
QL07p000712 Quercus lobata HOM05D002737 ORTHO05D005828 5.2e-15 85.1 161 40.4
Dinv17085 Davidia involucrata HOM05D002737 ORTHO05D005828 8.9e-15 84.3 150 42.7
TAR268G0004 Trochodendron aralioides HOM05D002737 ORTHO05D005828 2.2e-13 79.7 149 39.6
Glyma.10G288000 Glycine max HOM05D002737 ORTHO05D005828 4.9e-13 78.6 141 38.3
Glyma.20G101200 Glycine max HOM05D002737 ORTHO05D005828 2.1e-11 73.2 141 34.8
Lj5g0011855 Lotus japonicus HOM05D002737 ORTHO05D005828 2.7e-11 72.8 143 39.2
Medtr5g095010 Medicago truncatula HOM05D002737 ORTHO05D005828 3.5e-11 72.4 147 38.8
TWI79G0303 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 3.5e-11 72.4 159 32.7
Actinidia24241 Actinidia chinensis HOM05D002737 ORTHO05D005828 4.6e-11 72.0 150 39.3
Ca_06383_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 7.8e-11 71.2 138 35.5
Ca_29964_v3 Cicer arietinum L. HOM05D001458 ORTHO05D007170 7.8e-11 71.2 138 35.5
FvH4_1g21730 Fragaria vesca HOM05D002737 ORTHO05D005828 7.8e-11 71.2 139 36.7
FAN23G1354 Fragaria x ananassa HOM05D002737 ORTHO05D005828 7.8e-11 71.2 148 35.8
VMungo0720G0453 Vigna mungo HOM05D002737 ORTHO05D005828 7.8e-11 71.2 140 37.1
QL07p000775 Quercus lobata HOM05D002737 ORTHO05D005828 1.0e-10 70.9 125 38.4
Gohir.D07G115800 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.3e-10 70.5 159 37.1
Gorai.001G124100 Gossypium raimondii HOM05D002737 ORTHO05D005828 1.3e-10 70.5 159 37.1
CANSAT64G0180 Cannabis sativa HOM05D002737 ORTHO05D005828 1.7e-10 70.1 156 39.1
FAN26G0444 Fragaria x ananassa HOM05D002737 ORTHO05D005828 1.7e-10 70.1 148 35.8
Lj5g0022679 Lotus japonicus HOM05D002737 ORTHO05D005828 1.7e-10 70.1 143 37.8
TWI77G0520 Tripterygium wilfordii HOM05D002737 ORTHO05D005828 2.3e-10 69.7 154 35.1
FAN19G0045 Fragaria x ananassa HOM05D002737 ORTHO05D005828 3.9e-10 68.9 148 35.1
Manes.01G182101 Manihot esculenta HOM05D002737 ORTHO05D005828 3.9e-10 68.9 157 37.6
Actinidia07271 Actinidia chinensis HOM05D002737 ORTHO05D005828 8.6e-10 67.8 150 37.3
CSS0011545 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 1.5e-09 67.0 147 38.8
CSS0011939 Camellia sinensis var. sinensis HOM05D002737 ORTHO05D005828 1.5e-09 67.0 147 38.8
Psat2g008640 Pisum sativum HOM05D002737 ORTHO05D005828 1.9e-09 66.6 143 37.8
COL.COLO4_22657 Corchorus olitorius HOM05D002737 ORTHO05D005828 4.3e-09 65.5 157 33.8
Duzib168G0210 Durio zibethinus HOM05D002737 ORTHO05D005828 7.3e-09 64.7 158 36.1
Potri.009G162500 Populus trichocarpa HOM05D002737 ORTHO05D005828 9.5e-09 64.3 159 35.2
Gohir.A07G112300 Gossypium hirsutum HOM05D002737 ORTHO05D005828 1.6e-08 63.5 159 36.5
DCAR_003399 Daucus carota HOM05D002737 ORTHO05D005828 2.8e-08 62.8 152 36.2
Lj7A589T65 Lonicera japonica HOM05D002737 ORTHO05D005828 3.6e-08 62.4 145 37.9
Duzib150G0779 Durio zibethinus HOM05D002737 ORTHO05D005828 6.2e-08 61.6 154 35.1
Phvul.007G013400 Phaseolus vulgaris HOM05D002737 ORTHO05D005828 6.2e-08 61.6 140 35.0
QL07p000693 Quercus lobata HOM05D002737 ORTHO05D009499 8.1e-08 61.2 112 36.6
Lalb_Chr02g0143691 Lupinus albus HOM05D002737 ORTHO05D005828 1.1e-07 60.8 142 35.2
MD15G1329700 Malus domestica HOM05D002737 ORTHO05D005828 1.1e-07 60.8 165 33.3
Ciclev10028821m.g Citrus clementina HOM05D002737 ORTHO05D005828 2.3e-07 59.7 163 41.7
Prupe.6G178500 Prunus persica HOM05D002737 ORTHO05D005828 3.1e-07 59.3 65 53.8
vmacro03959 Vaccinium macrocarpon HOM05D002737 ORTHO05D005828 3.1e-07 59.3 150 34.7
ClCG01G011660 Citrullus lanatus HOM05D002737 ORTHO05D005828 8.9e-07 57.8 156 34.0
Lsat_1_v5_gn_5_176321 Lactuca sativa HOM05D002737 ORTHO05D005828 2.0e-06 56.6 139 29.5
arahy.Tifrunner.gnm1.ann1.AGV1MP Arachis hypogaea HOM05D002737 ORTHO05D005828 2.6e-06 56.2 64 56.2
Oeu049293.2 Olea europaea HOM05D002737 ORTHO05D005828 4.4e-06 55.5 154 29.2
Sc12g0004790 Simmondsia chinensis HOM05D002737 ORTHO05D005828 4.4e-06 55.5 151 35.8
arahy.Tifrunner.gnm1.ann1.0K86JE Arachis hypogaea HOM05D002737 ORTHO05D005828 5.8e-06 55.1 78 46.2
Nn6g34744 Nelumbo nucifera HOM05D002737 ORTHO05D005828 5.8e-06 55.1 149 34.9
MELO3C003924.2 Cucumis melo HOM05D002737 ORTHO05D005828 7.6e-06 54.7 147 30.6
Eucgr.J00541 Eucalyptus grandis HOM05D002737 ORTHO05D005828 7.6e-06 54.7 167 46.7


User provided reference genes

Program Settings