Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00711 Corylus avellana HOM05D007575 ORTHO05D009611 6.9e-293 1010.0 537 100.0
Cfa015783 Carpinus fangiana HOM05D007575 ORTHO05D009611 5.1e-280 967.2 540 95.2
CiPaw.01G103900 Carya illinoinensis HOM05D007575 ORTHO05D009611 1.2e-209 733.4 543 75.3
QL10p045159 Quercus lobata HOM05D007575 ORTHO05D009611 8.6e-203 710.7 541 72.6
Sabra07G0100200 Salix brachista HOM05D007575 ORTHO05D009611 2.8e-153 546.2 542 57.6
Manes.11G115700 Manihot esculenta HOM05D007575 ORTHO05D009611 2.9e-150 536.2 549 58.7
Prupe.1G189300 Prunus persica HOM05D007575 ORTHO05D009611 2.7e-148 529.6 550 56.2
GSVIVG01013567001 Vitis vinifera HOM05D007575 ORTHO05D009611 3.1e-144 516.2 548 56.4
CSS0031716 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 6.9e-144 515.0 577 53.6
Potri.017G036600 Populus trichocarpa HOM05D007575 ORTHO05D009611 3.4e-143 512.7 543 56.2
Gorai.011G145500 Gossypium raimondii HOM05D007575 ORTHO05D009611 5.5e-141 505.4 546 56.0
Thecc.04G183800 Theobroma cacao HOM05D007575 ORTHO05D009611 5.5e-141 505.4 548 56.2
Gohir.D10G131800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.1e-140 503.4 541 55.6
Duzib151G0056 Durio zibethinus HOM05D007575 ORTHO05D009611 1.0e-139 501.1 544 55.5
MD04G1038600 Malus domestica HOM05D007575 ORTHO05D009611 2.2e-137 493.4 556 53.4
Gohir.A10G134800 Gossypium hirsutum HOM05D007575 ORTHO05D009611 2.8e-137 493.0 542 55.5
TAR633G2419 Trochodendron aralioides HOM05D007575 ORTHO05D009611 3.7e-137 492.7 545 53.4
Actinidia39859 Actinidia chinensis HOM05D007575 ORTHO05D009611 5.0e-134 482.3 578 51.9
Ciclev10019508m.g Citrus clementina HOM05D007575 ORTHO05D009611 2.7e-132 476.5 585 52.0
FvH4_4g11270 Fragaria vesca HOM05D007575 ORTHO05D009611 6.7e-131 471.9 610 49.8
Gorai.009G350900 Gossypium raimondii HOM05D007575 ORTHO05D009611 1.1e-130 471.1 540 54.8
FAN17G1632 Fragaria x ananassa HOM05D007575 ORTHO05D009611 3.3e-130 469.5 610 47.9
Gohir.D05G326300 Gossypium hirsutum HOM05D007575 ORTHO05D009611 7.5e-130 468.4 540 54.6
FAN07G0850 Fragaria x ananassa HOM05D007575 ORTHO05D009611 7.0e-128 461.8 609 47.0
RcHm_v2.0_Chr4g0407361 Rosa chinensis HOM05D007575 ORTHO05D009611 1.9e-125 453.8 603 48.3
ClCG08G004240 Citrullus lanatus HOM05D007575 ORTHO05D009611 5.5e-125 452.2 548 51.1
CANSAT78G0404 Cannabis sativa HOM05D007575 ORTHO05D009611 9.4e-125 451.4 540 50.7
Rhsim09G0032600 Rhododendron simsii HOM05D007575 ORTHO05D009611 1.2e-124 451.1 571 49.2
Gohir.A05G326900 Gossypium hirsutum HOM05D007575 ORTHO05D009611 4.7e-124 449.1 539 53.2
CsaV3_6G003720 Cucumis sativus L. HOM05D007575 ORTHO05D009611 1.8e-123 447.2 549 50.8
Potri.007G123800 Populus trichocarpa HOM05D007575 ORTHO05D009611 3.0e-123 446.4 477 54.9
Actinidia11312 Actinidia chinensis HOM05D007575 ORTHO05D009611 5.2e-123 445.7 546 50.4
Atru.chr3.1619 Acer truncatum HOM05D007575 ORTHO05D009611 1.5e-122 444.1 514 51.8
Sabra17G0024000 Salix brachista HOM05D007575 ORTHO05D009611 2.8e-121 439.9 582 49.0
MELO3C011621.2 Cucumis melo HOM05D007575 ORTHO05D009611 5.4e-120 435.6 551 50.6
Eucgr.A00245 Eucalyptus grandis HOM05D007575 ORTHO05D009611 5.0e-118 429.1 540 49.6
Sed0001943 Sechium edule HOM05D007575 ORTHO05D009611 4.2e-117 426.0 552 49.3
Lj6A70T54 Lonicera japonica HOM05D007575 ORTHO05D009611 2.1e-116 423.7 649 45.5
FAN22G0659 Fragaria x ananassa HOM05D007575 ORTHO05D009611 1.4e-115 421.0 622 44.5
THA.LOC104803562 Tarenaya hassleriana HOM05D007575 ORTHO05D009611 2.2e-113 413.7 550 49.6
Aa31LG1G25020 Aethionema arabicum HOM05D007575 ORTHO05D009611 2.4e-112 410.2 551 48.6
Sp4g25330 Schrenkiella parvula HOM05D007575 ORTHO05D009611 2.7e-111 406.8 551 48.8
Migut.N00470 Erythranthe guttata HOM05D007575 ORTHO05D009611 4.5e-111 406.0 540 46.3
Thhalv10001393m.g Eutrema salsugineum HOM05D007575 ORTHO05D009611 1.3e-110 404.4 549 50.1
Carub.0004s2568 Capsella rubella HOM05D007575 ORTHO05D009611 1.7e-110 404.1 552 48.6
Oeu050351.1 Olea europaea HOM05D007575 ORTHO05D009611 1.7e-110 404.1 542 48.9
CAN.G710.64 Capsicum annuum HOM05D007575 ORTHO05D009611 1.1e-109 401.4 547 48.1
COL.COLO4_24385 Corchorus olitorius HOM05D001792 ORTHO05D001821 1.5e-109 401.0 537 47.3
Cc03_g13380 Coffea canephora HOM05D007575 ORTHO05D009611 1.9e-109 400.6 546 46.3
vmacro00586 Vaccinium macrocarpon HOM05D007575 ORTHO05D009611 3.6e-108 396.4 609 45.6
AL4G41870 Arabidopsis lyrata HOM05D007575 ORTHO05D009611 2.3e-107 393.7 554 47.3
PGR083G2249 Punica granatum HOM05D007575 ORTHO05D009611 1.5e-106 391.0 544 47.1
AT2G43210 Arabidopsis thaliana HOM05D007575 ORTHO05D009611 4.4e-106 389.4 543 45.9
MBI08_g10298_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 1.7e-105 387.5 609 43.7
MSTRG.24588 Avicennia marina HOM05D007575 ORTHO05D009611 1.1e-104 384.8 548 44.5
Nn1g09745 Nelumbo nucifera HOM05D007575 ORTHO05D009611 1.2e-103 381.3 572 43.7
HanXRQChr02g0057801 Helianthus annuus HOM05D007575 ORTHO05D009611 3.5e-103 379.8 549 47.2
SalBow6G5467 Salvia bowleyana HOM05D007575 ORTHO05D009611 1.3e-102 377.9 550 44.0
SGA_v2.0_scaffold406G51053 Striga asiatica HOM05D007575 ORTHO05D009611 2.3e-99 367.1 551 45.2
DCAR_027534 Daucus carota HOM05D007575 ORTHO05D009611 3.4e-98 363.2 548 44.0
ECA233G3130 Erigeron canadensis HOM05D007575 ORTHO05D009611 6.4e-97 359.0 546 45.2
Lsat_1_v5_gn_6_54841 Lactuca sativa HOM05D007575 ORTHO05D009611 1.1e-96 358.2 549 44.4
Sopen09g036470 Solanum pennellii HOM05D007575 ORTHO05D009611 1.9e-96 357.5 540 45.2
BraA04t18714Z Brassica rapa HOM05D001811 ORTHO05D001738 7.8e-95 352.1 544 44.5
A04p32490 Brassica napus HOM05D007575 ORTHO05D009611 1.5e-93 347.8 592 42.6
C04p70190 Brassica napus HOM05D007575 ORTHO05D009611 8.1e-92 342.0 568 43.1
Peaxi162Scf00286g00233 Petunia axillaris HOM05D007575 ORTHO05D009611 8.6e-86 322.0 567 41.6
ATR0743G244 Amborella trichopoda HOM05D007575 ORTHO05D009611 1.5e-85 321.2 548 38.5
Lj6A61T39 Lonicera japonica HOM05D007575 ORTHO05D009611 2.9e-81 307.0 370 52.7
HPP92_002813 Vanilla planifolia HOM05D007575 ORTHO05D009611 6.4e-81 305.8 555 39.8
CDE09G0236 Ceratophyllum demersum HOM05D007575 ORTHO05D009611 2.5e-77 293.9 541 38.8
HPP92_002869 Vanilla planifolia HOM05D007575 ORTHO05D009611 4.3e-77 293.1 523 39.6
Nitab4.5_0004962g0010 Nicotiana tabacum HOM05D007575 ORTHO05D009611 6.9e-75 285.8 466 42.5
Nitab4.5_0001049g0060 Nicotiana tabacum HOM05D007575 ORTHO05D009611 2.0e-74 284.3 466 42.3
unitig_8.g3630 Utricularia gibba HOM05D007575 ORTHO05D009611 2.0e-74 284.3 565 39.6
PSO210G6745 Papaver somniferum HOM05D007575 ORTHO05D009611 4.4e-74 283.1 561 40.5
Os11g0293900 Oryza sativa ssp. japonica HOM05D007575 ORTHO05D009611 1.6e-71 274.6 547 35.1
CARHR138270 Cardamine hirsuta HOM05D007575 ORTHO05D009611 7.8e-71 272.3 472 43.2
BcaNung07370 Brassica carinata HOM05D007575 ORTHO05D009611 2.3e-70 270.8 467 43.0
Solyc09g098550.4 Solanum lycopersicum HOM05D007575 ORTHO05D009611 6.6e-70 269.2 462 42.0
PSO832G0541 Papaver somniferum HOM05D007575 ORTHO05D009611 9.3e-56 222.2 469 39.0
Hma1.2p1_1477F.1_g285910 Hydrangea macrophylla HOM05D007575 ORTHO05D009611 7.6e-50 202.6 427 40.7
TAR633G1182 Trochodendron aralioides HOM05D007575 ORTHO05D009611 7.2e-40 169.5 171 56.7
CSS0007449 Camellia sinensis var. sinensis HOM05D007575 ORTHO05D009611 1.3e-36 158.7 350 36.6
Eucgr.A00051 Eucalyptus grandis HOM05D007575 ORTHO05D009611 5.3e-35 153.3 170 53.5
Mapoly0164s0007 Marchantia polymorpha HOM05D007575 ORTHO05D009611 9.1e-35 152.5 460 29.8
SEGI_13760 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.2e-34 152.1 404 30.0
SalBow5G2148 Salvia bowleyana HOM05D007575 ORTHO05D009611 3.4e-34 150.6 172 47.7
SalBow5G4021 Salvia bowleyana HOM05D007575 ORTHO05D009611 3.4e-34 150.6 172 47.7
BcaB06g29288 Brassica carinata HOM05D007575 ORTHO05D009611 7.2e-32 142.9 128 56.2
Zm00001eb198990 Zea mays HOM05D007575 ORTHO05D009611 4.6e-31 140.2 221 40.7
Pp3c20_2320 Physcomitrium patens HOM05D007575 ORTHO05D009611 2.3e-30 137.9 533 25.9
Lsat_1_v5_gn_5_138981 Lactuca sativa HOM05D007575 ORTHO05D009611 1.3e-28 132.1 343 34.7
SEGI_03248 Sequoiadendron giganteum HOM05D007575 ORTHO05D009611 1.9e-24 118.2 172 44.8
SMO116G0403 Selaginella moellendorffii HOM05D007575 ORTHO05D009611 7.9e-23 112.8 556 24.3
AagrBONN_evm.TU.Sc2ySwM_344.3290 Anthoceros agrestis HOM05D007575 ORTHO05D009611 1.5e-21 108.6 430 29.3
PGSC0003DMG400021612 Solanum tuberosum HOM05D007575 ORTHO05D009611 2.9e-17 94.4 78 65.4
MBI08_g05086_MAGBIO Magnolia biondii HOM05D007575 ORTHO05D009611 4.5e-10 70.5 74 52.7
CBR_g123 Chara braunii HOM05D007575 ORTHO05D009611 7.2e-08 63.2 759 20.9


User provided reference genes

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