Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00699 Corylus avellana HOM05D006134 ORTHO05D007671 3.6e-82 308.1 151 100.0
Ciclev10029589m.g Citrus clementina HOM05D006134 ORTHO05D007671 1.7e-63 246.1 125 92.8
CANSAT80G1040 Cannabis sativa HOM05D006134 ORTHO05D007671 2.9e-63 245.4 125 91.2
Atru.chr9.1880 Acer truncatum HOM05D006134 ORTHO05D007671 8.4e-63 243.8 125 91.2
Cpa.g.sc182.12 Carica papaya HOM05D006134 ORTHO05D007671 8.4e-63 243.8 125 90.4
Manes.11G097800 Manihot esculenta HOM05D006134 ORTHO05D007671 1.1e-62 243.4 125 92.0
arahy.Tifrunner.gnm1.ann1.A6PCA1 Arachis hypogaea HOM05D006134 ORTHO05D007671 1.4e-62 243.0 126 88.9
VMungo1080G1627 Vigna mungo HOM05D006134 ORTHO05D007671 4.2e-62 241.5 128 87.5
CiPaw.10G137600 Carya illinoinensis HOM05D006134 ORTHO05D007671 9.3e-62 240.4 125 89.6
Lalb_Chr10g0093471 Lupinus albus HOM05D006134 ORTHO05D007671 2.7e-61 238.8 125 87.2
Lalb_Chr10g0093491 Lupinus albus HOM05D006134 ORTHO05D007671 2.7e-61 238.8 125 87.2
QL11p052022 Quercus lobata HOM05D006134 ORTHO05D007671 2.7e-61 238.8 124 90.3
QL11p052248 Quercus lobata HOM05D006134 ORTHO05D007671 2.7e-61 238.8 124 90.3
CSS0024749 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 3.5e-61 238.4 126 85.7
CSS0037732 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 3.5e-61 238.4 125 86.4
arahy.Tifrunner.gnm1.ann1.PD8D7M Arachis hypogaea HOM05D006134 ORTHO05D007671 6.0e-61 237.7 125 88.0
Glyma.11G156931 Glycine max HOM05D006134 ORTHO05D007671 6.0e-61 237.7 125 87.2
MELO3C008634.2 Cucumis melo HOM05D006134 ORTHO05D007671 1.0e-60 236.9 125 86.4
Cc02_g30030 Coffea canephora HOM05D006134 ORTHO05D007671 1.3e-60 236.5 125 87.2
Medtr3g082190 Medicago truncatula HOM05D006134 ORTHO05D007671 1.8e-60 236.1 129 84.5
CSS0027024 Camellia sinensis var. sinensis HOM05D006134 ORTHO05D007671 3.0e-60 235.3 125 84.8
Psat5g110600 Pisum sativum HOM05D006134 ORTHO05D007671 3.0e-60 235.3 125 85.6
Sed0025018 Sechium edule HOM05D006134 ORTHO05D007671 3.0e-60 235.3 125 85.6
EL10Ac9g21342 Beta vulgaris HOM05D006134 ORTHO05D007671 6.7e-60 234.2 125 88.8
CsaV3_2G009990 Cucumis sativus L. HOM05D006134 ORTHO05D007671 8.7e-60 233.8 125 85.6
Dinv21074 Davidia involucrata HOM05D006134 ORTHO05D007671 8.7e-60 233.8 126 85.7
Lj6g0003235 Lotus japonicus HOM05D006134 ORTHO05D007671 1.1e-59 233.4 125 84.8
Peaxi162Scf00359g00813 Petunia axillaris HOM05D006134 ORTHO05D007671 1.1e-59 233.4 125 85.6
AUR62021421 Chenopodium quinoa HOM05D006134 ORTHO05D007671 2.5e-59 232.3 125 88.0
Hund14365 Selenicereus undatus HOM05D006134 ORTHO05D007671 2.5e-59 232.3 125 87.2
Ca_17958_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.3e-59 231.5 125 84.0
Phvul.005G034200 Phaseolus vulgaris HOM05D006134 ORTHO05D007671 5.6e-59 231.1 125 84.8
SGA_v2.0_scaffold207G41895 Striga asiatica HOM05D006134 ORTHO05D007671 7.4e-59 230.7 125 85.6
Lsat_1_v5_gn_1_25060 Lactuca sativa HOM05D006134 ORTHO05D007671 1.6e-58 229.6 129 82.2
Nitab4.5_0000101g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 3.6e-58 228.4 125 81.6
DCAR_025267 Daucus carota HOM05D006444 ORTHO05D007748 6.2e-58 227.6 129 83.7
Ah.01g023220 Amaranthus hybridus HOM05D006134 ORTHO05D007671 1.1e-57 226.9 125 83.2
FAN04G0013 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.1e-57 226.9 125 86.4
FAN08G0898 Fragaria x ananassa HOM05D006134 ORTHO05D007671 1.1e-57 226.9 125 86.4
COL.COLO4_32379 Corchorus olitorius HOM05D006134 ORTHO05D007671 4.0e-57 224.9 125 86.4
FvH4_5g23580 Fragaria vesca HOM05D006134 ORTHO05D007671 4.0e-57 224.9 125 85.6
FAN18G0426 Fragaria x ananassa HOM05D006134 ORTHO05D007671 4.0e-57 224.9 125 85.6
FAN18G3769 Fragaria x ananassa HOM05D006134 ORTHO05D007671 4.0e-57 224.9 125 85.6
GSVIVG01023976001 Vitis vinifera HOM05D006134 ORTHO05D007671 4.0e-57 224.9 125 83.2
RcHm_v2.0_Chr7g0212881 Rosa chinensis HOM05D006134 ORTHO05D007671 5.3e-57 224.6 125 85.6
HanXRQChr12g0383651 Helianthus annuus HOM05D006134 ORTHO05D007671 6.9e-57 224.2 125 82.4
AUR62010905 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.2e-56 223.4 137 80.3
PGSC0003DMG400020551 Solanum tuberosum HOM05D006134 ORTHO05D007671 1.2e-56 223.4 125 83.2
CAN.G181.11 Capsicum annuum HOM05D006134 ORTHO05D007671 1.5e-56 223.0 125 83.2
Solyc06g007480.3 Solanum lycopersicum HOM05D006134 ORTHO05D007671 1.5e-56 223.0 125 83.2
Oeu055649.1 Olea europaea HOM05D006134 ORTHO05D007671 2.6e-56 222.2 125 83.2
Thecc.02G130200 Theobroma cacao HOM05D006134 ORTHO05D007671 2.6e-56 222.2 125 86.4
FAN13G0082 Fragaria x ananassa HOM05D006134 ORTHO05D007671 5.8e-56 221.1 125 84.0
Sopen06g002390 Solanum pennellii HOM05D006134 ORTHO05D007671 5.8e-56 221.1 125 82.4
TAR376G1190 Trochodendron aralioides HOM05D006134 ORTHO05D007671 5.8e-56 221.1 125 83.2
Duzib052G0391 Durio zibethinus HOM05D006134 ORTHO05D007671 9.9e-56 220.3 125 85.6
Nitab4.5_0000890g0130 Nicotiana tabacum HOM05D006134 ORTHO05D007671 1.3e-55 219.9 132 78.0
Potri.016G127200 Populus trichocarpa HOM05D006134 ORTHO05D007671 2.2e-55 219.2 125 85.6
SGA_v2.0_scaffold80G25864 Striga asiatica HOM05D006134 ORTHO05D007671 2.9e-55 218.8 126 79.4
Gohir.D01G010100 Gossypium hirsutum HOM05D006134 ORTHO05D007671 8.4e-55 217.2 125 85.6
Gorai.002G012200 Gossypium raimondii HOM05D006134 ORTHO05D007671 8.4e-55 217.2 125 85.6
MSTRG.5438 Avicennia marina HOM05D006134 ORTHO05D007671 1.1e-54 216.9 125 81.6
TWI79G0531 Tripterygium wilfordii HOM05D006134 ORTHO05D007671 1.1e-54 216.9 125 84.0
Nn6g31911 Nelumbo nucifera HOM05D006134 ORTHO05D007671 1.4e-54 216.5 125 80.0
SalBow3G4511 Salvia bowleyana HOM05D006134 ORTHO05D007671 1.4e-54 216.5 125 80.8
PGR042G1126 Punica granatum HOM05D006134 ORTHO05D007671 2.4e-54 215.7 125 80.8
Migut.N01297 Erythranthe guttata HOM05D006134 ORTHO05D007671 3.2e-54 215.3 126 80.2
HanXRQChr10g0314981 Helianthus annuus HOM05D006134 ORTHO05D007671 3.2e-54 215.3 126 79.4
unitig_52.g17376 Utricularia gibba HOM05D006134 ORTHO05D007671 3.2e-54 215.3 125 80.0
ECA247G3382 Erigeron canadensis HOM05D006134 ORTHO05D007671 9.3e-54 213.8 125 80.0
Gohir.A01G010500 Gossypium hirsutum HOM05D006134 ORTHO05D007671 9.3e-54 213.8 125 84.8
Dinv31631 Davidia involucrata HOM05D006134 ORTHO05D007671 1.2e-53 213.4 125 80.8
Oeu002964.1 Olea europaea HOM05D006134 ORTHO05D007671 6.0e-53 211.1 125 79.2
Duzib248G0743 Durio zibethinus HOM05D006134 ORTHO05D007671 1.0e-52 210.3 150 72.0
TAR628G0583 Trochodendron aralioides HOM05D006134 ORTHO05D007671 1.0e-52 210.3 125 79.2
Eucgr.F02572 Eucalyptus grandis HOM05D006134 ORTHO05D007671 3.0e-52 208.8 125 77.6
Sc08g0002730 Simmondsia chinensis HOM05D006134 ORTHO05D007671 3.9e-52 208.4 125 84.8
ClCG11G010360 Citrullus lanatus HOM05D006134 ORTHO05D007671 5.1e-52 208.0 108 85.2
THA.LOC104807806 Tarenaya hassleriana HOM05D006134 ORTHO05D007671 5.1e-52 208.0 125 80.8
CDE04G1640 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 6.7e-52 207.6 125 77.6
MD12G1003500 Malus domestica HOM05D006134 ORTHO05D007671 6.7e-52 207.6 103 92.2
Aa31LG6G16690 Aethionema arabicum HOM05D006134 ORTHO05D007671 7.4e-51 204.1 125 78.4
Rhsim11G0193500 Rhododendron simsii HOM05D006134 ORTHO05D007671 7.4e-51 204.1 172 62.2
vmacro02291 Vaccinium macrocarpon HOM05D006134 ORTHO05D007671 1.3e-50 203.4 205 53.7
Aqoxy5G01105 Aquilegia oxysepala HOM05D006134 ORTHO05D007671 2.1e-50 202.6 127 76.4
PSO170G0646 Papaver somniferum HOM05D006134 ORTHO05D007671 6.2e-50 201.1 125 76.0
PSO210G5022 Papaver somniferum HOM05D006134 ORTHO05D007671 6.2e-50 201.1 125 75.2
Prupe.7G004000 Prunus persica HOM05D006134 ORTHO05D007671 8.1e-50 200.7 125 77.6
Sp7g37280 Schrenkiella parvula HOM05D006134 ORTHO05D007671 1.8e-49 199.5 125 76.8
AUR62013003 Chenopodium quinoa HOM05D006134 ORTHO05D007671 4.0e-49 198.4 103 90.3
CDE02G2427 Ceratophyllum demersum HOM05D006134 ORTHO05D007671 1.2e-48 196.8 125 72.8
ATR0730G227 Amborella trichopoda HOM05D006134 ORTHO05D007671 2.0e-48 196.1 125 72.0
Thhalv10026572m.g Eutrema salsugineum HOM05D006134 ORTHO05D007671 3.4e-48 195.3 125 74.4
AUR62010013 Chenopodium quinoa HOM05D006134 ORTHO05D007671 1.0e-47 193.7 103 88.3
AUR62015152 Chenopodium quinoa HOM05D006134 ORTHO05D007671 6.5e-47 191.0 103 86.4
Sed0020335 Sechium edule HOM05D006134 ORTHO05D007671 4.2e-46 188.3 125 71.2
Mapoly0028s0104 Marchantia polymorpha HOM05D006134 ORTHO05D007671 1.6e-45 186.4 122 68.9
HanXRQChr07g0198481 Helianthus annuus HOM05D006134 ORTHO05D007671 2.7e-45 185.7 125 72.0
SMO367G0732 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 2.5e-43 179.1 124 68.5
AT4G38495 Arabidopsis thaliana HOM05D006134 ORTHO05D007671 4.3e-43 178.3 125 67.2
Pp3c14_10610 Physcomitrium patens HOM05D006134 ORTHO05D007671 5.7e-43 177.9 122 68.0
Pp3c14_10611 Physcomitrium patens HOM05D006134 ORTHO05D007671 5.7e-43 177.9 122 68.0
Carub.0007s0038 Capsella rubella HOM05D006134 ORTHO05D007671 1.3e-42 176.8 125 68.8
Os04g0274400 Oryza sativa ssp. japonica HOM05D006134 ORTHO05D007671 6.3e-42 174.5 125 65.6
AL7G10360 Arabidopsis lyrata HOM05D006134 ORTHO05D007671 1.1e-41 173.7 120 68.3
BcaNung01304 Brassica carinata HOM05D006134 ORTHO05D007671 5.3e-41 171.4 125 67.2
C01p00090 Brassica napus HOM05D006134 ORTHO05D007671 5.3e-41 171.4 125 67.2
A01p00050 Brassica napus HOM05D006134 ORTHO05D007671 7.6e-40 167.5 125 66.4
BcaNung04221 Brassica carinata HOM05D006134 ORTHO05D007671 1.6e-37 159.8 127 63.8
CBR_g12196 Chara braunii HOM05D006134 ORTHO05D007671 1.9e-35 152.9 149 55.7
Zm00001eb420290 Zea mays HOM05D006134 ORTHO05D007671 2.2e-34 149.4 113 59.3
Sabra16G0121200 Salix brachista HOM05D006134 ORTHO05D007671 2.9e-31 139.0 81 81.5
Sabra16G0122100 Salix brachista HOM05D006134 ORTHO05D007671 2.9e-31 139.0 81 81.5
Prupe.4G038000 Prunus persica HOM05D006134 ORTHO05D007671 2.8e-26 122.5 108 60.2
BolC1t00014H Brassica oleracea HOM05D006134 ORTHO05D007671 1.0e-23 114.0 81 66.7
BraA01t00010Z Brassica rapa HOM05D006134 ORTHO05D007671 1.9e-22 109.8 81 65.4
Ca_02756_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.2e-22 108.6 58 82.8
Ca_02758_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 4.2e-22 108.6 58 82.8
A07p02890 Brassica napus HOM05D006134 ORTHO05D007671 2.1e-21 106.3 78 65.4
BraA07t28089Z Brassica rapa HOM05D006134 ORTHO05D007671 2.1e-21 106.3 78 65.4
Ca_02994_v3 Cicer arietinum L. HOM05D006134 ORTHO05D007671 2.3e-20 102.8 53 86.8
Nitab4.5_0000165g0190 Nicotiana tabacum HOM05D006134 ORTHO05D007671 3.0e-20 102.4 69 72.5
SHI24498 Sapria himalayana HOM05D006134 ORTHO05D007671 9.7e-19 97.4 59 76.3
SEGI_00696 Sequoiadendron giganteum HOM05D006134 ORTHO05D007671 6.3e-18 94.7 66 68.2
CARHR294230 Cardamine hirsuta HOM05D006134 ORTHO05D007671 5.9e-16 88.2 79 57.0
Sabra16G0121700 Salix brachista HOM05D006134 ORTHO05D007671 5.5e-14 81.6 45 86.7
TPR.G34385 Trifolium pratense HOM05D006134 ORTHO05D007671 1.8e-12 76.6 44 77.3
EL10Ac8g18393 Beta vulgaris HOM05D006134 ORTHO05D007671 6.7e-12 74.7 44 81.8
SMO230G0118 Selaginella moellendorffii HOM05D006134 ORTHO05D007671 4.2e-06 55.5 40 62.5


User provided reference genes

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