Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00685 Corylus avellana HOM05D005473 ORTHO05D006543 1.7e-222 775.8 408 100.0
Cfa015813 Carpinus fangiana HOM05D000048 ORTHO05D000207 2.5e-178 629.0 406 82.8
QL01p003042 Quercus lobata HOM05D005473 ORTHO05D006543 5.8e-151 538.1 406 70.4
CiPaw.05G245400 Carya illinoinensis HOM05D005473 ORTHO05D006543 1.3e-147 526.9 407 70.8
Dinv04903 Davidia involucrata HOM05D005473 ORTHO05D006543 1.9e-130 469.9 403 64.5
Prupe.1G320100 Prunus persica HOM05D005473 ORTHO05D006543 1.6e-129 466.8 406 61.8
GSVIVG01011804001 Vitis vinifera HOM05D005473 ORTHO05D006543 1.8e-128 463.4 406 62.8
vmacro01424 Vaccinium macrocarpon HOM05D005473 ORTHO05D006543 9.4e-125 451.1 406 61.3
Ciclev10015542m.g Citrus clementina HOM05D005473 ORTHO05D006543 2.5e-122 443.0 402 60.9
TAR622G1045 Trochodendron aralioides HOM05D005473 ORTHO05D006543 7.4e-122 441.4 405 58.5
Rhsim12G0088500 Rhododendron simsii HOM05D005473 ORTHO05D006543 2.8e-121 439.5 426 58.7
CSS0031478 Camellia sinensis var. sinensis HOM05D005473 ORTHO05D006543 4.8e-121 438.7 406 60.8
Potri.008G126400 Populus trichocarpa HOM05D005473 ORTHO05D006543 4.8e-121 438.7 405 57.8
Hma1.2p1_0114F.1_g055460 Hydrangea macrophylla HOM05D005473 ORTHO05D006543 1.8e-120 436.8 405 59.8
Atru.chr11.335 Acer truncatum HOM05D005473 ORTHO05D006543 1.0e-118 431.0 402 58.7
Manes.14G109600 Manihot esculenta HOM05D005473 ORTHO05D006543 1.3e-118 430.6 406 57.9
Sabra08G0095200 Salix brachista HOM05D005473 ORTHO05D006543 1.7e-118 430.3 406 57.1
MSTRG.875 Avicennia marina HOM05D005473 ORTHO05D006543 2.2e-118 429.9 406 58.9
RcHm_v2.0_Chr4g0434011 Rosa chinensis HOM05D005473 ORTHO05D006543 2.9e-118 429.5 406 58.1
Gohir.D05G319500 Gossypium hirsutum HOM05D005473 ORTHO05D006543 5.0e-118 428.7 406 57.9
Sabra16G0274100 Salix brachista HOM05D005473 ORTHO05D006543 3.2e-117 426.0 406 56.7
FvH4_4g26380 Fragaria vesca HOM05D005473 ORTHO05D006543 4.2e-117 425.6 406 57.6
FAN12G0751 Fragaria x ananassa HOM05D005473 ORTHO05D006543 5.5e-117 425.2 406 57.4
FAN12G1468 Fragaria x ananassa HOM05D005473 ORTHO05D006543 5.5e-117 425.2 406 57.4
FAN22G1873 Fragaria x ananassa HOM05D005473 ORTHO05D006543 5.5e-117 425.2 406 57.1
Nn4g24024 Nelumbo nucifera HOM05D005473 ORTHO05D006543 5.5e-117 425.2 409 56.5
Gorai.009G342800 Gossypium raimondii HOM05D005473 ORTHO05D006543 2.1e-116 423.3 406 57.4
FAN07G2597 Fragaria x ananassa HOM05D005473 ORTHO05D006543 7.9e-116 421.4 406 56.7
COL.COLO4_20121 Corchorus olitorius HOM05D005473 ORTHO05D006543 1.0e-115 421.0 406 55.7
FAN17G2750 Fragaria x ananassa HOM05D005473 ORTHO05D006543 1.4e-115 420.6 406 56.7
SalBow8G1667 Salvia bowleyana HOM05D005473 ORTHO05D006543 1.4e-115 420.6 406 56.7
Thecc.02G215500 Theobroma cacao HOM05D005473 ORTHO05D006543 1.8e-115 420.2 407 56.3
CAN.G1489.13 Capsicum annuum HOM05D005473 ORTHO05D006543 8.8e-115 417.9 406 59.1
Phvul.007G034400 Phaseolus vulgaris HOM05D005473 ORTHO05D006543 2.0e-114 416.8 410 56.3
Lj5g0028089 Lotus japonicus HOM05D005473 ORTHO05D006543 3.3e-114 416.0 406 56.7
arahy.Tifrunner.gnm1.ann1.GULV0C Arachis hypogaea HOM05D005473 ORTHO05D006543 7.4e-114 414.8 405 56.0
ClCG05G022330 Citrullus lanatus HOM05D005473 ORTHO05D006543 1.3e-113 414.1 407 58.2
Sed0015008 Sechium edule HOM05D005473 ORTHO05D006543 1.7e-113 413.7 406 57.1
arahy.Tifrunner.gnm1.ann1.45PR62 Arachis hypogaea HOM05D005473 ORTHO05D006543 2.8e-113 412.9 405 56.0
Eucgr.K00649 Eucalyptus grandis HOM05D005473 ORTHO05D006543 6.3e-113 411.8 402 55.5
VMungo0720G0454 Vigna mungo HOM05D005473 ORTHO05D006543 6.3e-113 411.8 405 55.8
Oeu059511.2 Olea europaea HOM05D005473 ORTHO05D006543 8.2e-113 411.4 394 57.1
Glyma.20G123200 Glycine max HOM05D005473 ORTHO05D006543 1.4e-112 410.6 406 57.4
Lj3A877T94 Lonicera japonica HOM05D005473 ORTHO05D006543 1.8e-112 410.2 431 55.5
Lalb_Chr06g0165731 Lupinus albus HOM05D005473 ORTHO05D006543 1.8e-112 410.2 401 57.6
CsaV3_5G034770 Cucumis sativus L. HOM05D005473 ORTHO05D006543 4.1e-112 409.1 407 56.8
Dinv16166 Davidia involucrata HOM05D005473 ORTHO05D006543 5.9e-111 405.2 406 56.7
PGSC0003DMG400030516 Solanum tuberosum HOM05D005473 ORTHO05D006543 5.9e-111 405.2 406 56.7
Solyc05g008520.3 Solanum lycopersicum HOM05D005473 ORTHO05D006543 7.7e-111 404.8 406 56.7
Gohir.A05G317600 Gossypium hirsutum HOM05D005473 ORTHO05D006543 8.5e-110 401.4 406 54.9
Sopen05g004360 Solanum pennellii HOM05D005473 ORTHO05D006543 8.5e-110 401.4 406 56.4
Atru.chr11.342 Acer truncatum HOM05D005473 ORTHO05D006543 1.4e-109 400.6 382 57.9
TPR.G4908 Trifolium pratense HOM05D005473 ORTHO05D006543 1.4e-109 400.6 406 55.7
Cc11_g09260 Coffea canephora HOM05D005473 ORTHO05D006543 7.2e-109 398.3 405 56.0
Psat6g222680 Pisum sativum HOM05D005473 ORTHO05D006543 4.7e-108 395.6 406 54.9
Migut.L01020 Erythranthe guttata HOM05D005473 ORTHO05D006543 6.1e-108 395.2 399 56.6
Ca_30210_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.8e-107 393.7 407 55.0
Medtr1g109070 Medicago truncatula HOM05D005473 ORTHO05D006543 1.5e-106 390.6 407 55.0
Sc11g0003970 Simmondsia chinensis HOM05D005473 ORTHO05D006543 2.0e-106 390.2 388 55.4
Cpa.g.sc65.93 Carica papaya HOM05D005473 ORTHO05D006543 2.6e-106 389.8 404 54.7
Actinidia31990 Actinidia chinensis HOM05D005473 ORTHO05D006543 3.7e-105 386.0 364 61.0
Peaxi162Scf00205g01024 Petunia axillaris HOM05D000048 ORTHO05D006543 4.8e-105 385.6 381 57.2
PGR119G2355 Punica granatum HOM05D005473 ORTHO05D006543 1.1e-101 374.4 406 51.2
CANSAT01G2653 Cannabis sativa HOM05D005473 ORTHO05D006543 4.2e-101 372.5 407 50.6
Lsat_1_v5_gn_3_54040 Lactuca sativa HOM05D005473 ORTHO05D006543 2.7e-100 369.8 406 50.7
HanXRQChr15g0477691 Helianthus annuus HOM05D005473 ORTHO05D006543 1.5e-98 364.0 401 51.6
ECA246G4292 Erigeron canadensis HOM05D005473 ORTHO05D006543 1.7e-97 360.5 413 50.4
AUR62002772 Chenopodium quinoa HOM05D005473 ORTHO05D006543 7.0e-96 355.1 388 50.5
Nitab4.5_0013146g0010 Nicotiana tabacum HOM05D005473 ORTHO05D006543 3.5e-95 352.8 347 57.9
Aa31LG7G6980 Aethionema arabicum HOM05D005473 ORTHO05D006543 4.5e-95 352.4 407 47.2
AUR62037258 Chenopodium quinoa HOM05D005473 ORTHO05D006543 1.3e-94 350.9 388 50.8
MBI16_g29822_MAGBIO Magnolia biondii HOM05D005473 ORTHO05D006543 5.0e-94 349.0 417 49.9
Ca_23703_v3 Cicer arietinum L. HOM05D005473 ORTHO05D006543 1.6e-92 344.0 407 49.6
A09p41740 Brassica napus HOM05D005473 ORTHO05D006543 3.6e-92 342.8 405 47.7
BraA09t39663Z Brassica rapa HOM05D005473 ORTHO05D006543 1.4e-91 340.9 405 46.7
SGA_v2.0_scaffold50G18546 Striga asiatica HOM05D005473 ORTHO05D006543 2.3e-91 340.1 407 48.4
AL1G36530 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 4.0e-91 339.3 405 46.9
EL10Ac6g14276 Beta vulgaris HOM05D005473 ORTHO05D006543 1.5e-90 337.4 416 48.6
AL2G30760 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 3.4e-90 336.3 406 48.3
PSO017G4790 Papaver somniferum HOM05D005473 ORTHO05D006543 7.5e-90 335.1 408 48.8
CARHR023350 Cardamine hirsuta HOM05D005473 ORTHO05D006543 2.2e-89 333.6 405 45.9
MELO3C012289.2 Cucumis melo HOM05D005473 ORTHO05D006543 2.2e-89 333.6 349 55.6
Potri.010G117100 Populus trichocarpa HOM05D005473 ORTHO05D006543 2.2e-89 333.6 350 54.3
AT1G22970 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 4.8e-89 332.4 405 46.4
Aqoxy5G03875 Aquilegia oxysepala HOM05D005473 ORTHO05D006543 6.3e-89 332.0 407 46.4
Carub.0001s2247 Capsella rubella HOM05D005473 ORTHO05D006543 6.3e-89 332.0 405 47.2
Thhalv10008033m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 3.1e-88 329.7 405 46.2
BraA07t31315Z Brassica rapa HOM05D005473 ORTHO05D006543 9.1e-88 328.2 407 46.2
BcaB07g32295 Brassica carinata HOM05D005473 ORTHO05D006543 1.2e-87 327.8 407 46.4
C05p22180 Brassica napus HOM05D005473 ORTHO05D006543 1.2e-87 327.8 408 45.6
Ah.03g138500 Amaranthus hybridus HOM05D005473 ORTHO05D006543 2.0e-87 327.0 391 47.6
DCAR_023622 Daucus carota HOM05D005473 ORTHO05D006543 4.5e-87 325.9 344 55.5
Sp5g26320 Schrenkiella parvula HOM05D005473 ORTHO05D006543 1.1e-85 321.2 408 46.3
AT1G71150 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 9.5e-85 318.2 407 46.2
BolC5t30918H Brassica oleracea HOM05D005473 ORTHO05D006543 1.2e-84 317.8 408 44.9
PSO478G0709 Papaver somniferum HOM05D005473 ORTHO05D006543 1.6e-84 317.4 408 47.1
BcaC05g26209 Brassica carinata HOM05D005473 ORTHO05D006543 2.1e-84 317.0 408 44.9
PSO782G5692 Papaver somniferum HOM05D005473 ORTHO05D006543 1.8e-83 313.9 408 46.1
Duzib268G1740 Durio zibethinus HOM05D005473 ORTHO05D006543 4.0e-83 312.8 325 53.8
CARHR064450 Cardamine hirsuta HOM05D005473 ORTHO05D006543 6.8e-83 312.0 408 44.6
Carub.0002s1804 Capsella rubella HOM05D005473 ORTHO05D006543 8.9e-83 311.6 407 44.7
THA.LOC104812031 Tarenaya hassleriana HOM05D005473 ORTHO05D006543 8.3e-81 305.1 343 50.1
Sp1g20430 Schrenkiella parvula HOM05D005473 ORTHO05D006543 5.9e-79 298.9 405 44.0
BcaB03g14874 Brassica carinata HOM05D005473 ORTHO05D006543 1.5e-77 294.3 362 48.6
CDE07G0910 Ceratophyllum demersum HOM05D005473 ORTHO05D006543 5.6e-77 292.4 407 41.3
HPP92_020137 Vanilla planifolia HOM05D005473 ORTHO05D006543 2.1e-76 290.4 396 45.2
TWI79G1332 Tripterygium wilfordii HOM05D005473 ORTHO05D006543 1.8e-75 287.3 391 44.8
BcaC08g46554 Brassica carinata HOM05D005473 ORTHO05D006543 1.4e-72 277.7 398 42.0
ATR0691G101 Amborella trichopoda HOM05D005473 ORTHO05D006543 3.2e-72 276.6 417 43.2
BolC6t39580H Brassica oleracea HOM05D005473 ORTHO05D006543 4.1e-72 276.2 393 41.7
Glyma.10G267900 Glycine max HOM05D005473 ORTHO05D006543 7.0e-72 275.4 238 62.6
Thecc.02G215400 Theobroma cacao HOM05D005473 ORTHO05D006543 1.5e-69 267.7 238 58.8
unitig_749.g14005 Utricularia gibba HOM05D005473 ORTHO05D006543 9.8e-66 255.0 331 47.1
Thhalv10018995m.g Eutrema salsugineum HOM05D005473 ORTHO05D006543 3.7e-65 253.1 317 49.5
A07p37530 Brassica napus HOM05D000048 ORTHO05D006543 1.1e-64 251.5 405 38.0
Os05g0554500 Oryza sativa ssp. japonica HOM05D005473 ORTHO05D006543 1.9e-64 250.8 401 37.4
Zm00001eb295130 Zea mays HOM05D005473 ORTHO05D006543 4.6e-63 246.1 402 39.3
Migut.O00950 Erythranthe guttata HOM05D005473 ORTHO05D006543 7.8e-63 245.4 227 59.5
AT1G22980 Arabidopsis thaliana HOM05D005473 ORTHO05D006543 6.2e-60 235.7 390 35.9
Actinidia33629 Actinidia chinensis HOM05D005473 ORTHO05D006543 5.2e-59 232.6 237 56.1
A01p19890 Brassica napus HOM05D005473 ORTHO05D006543 6.8e-59 232.3 236 53.4
SEGI_09717 Sequoiadendron giganteum HOM05D005473 ORTHO05D006543 5.8e-58 229.2 393 37.9
AL1G36540 Arabidopsis lyrata HOM05D005473 ORTHO05D006543 9.9e-58 228.4 390 36.2
HanXRQChr15g0477701 Helianthus annuus HOM05D005473 ORTHO05D006543 2.8e-52 210.3 394 36.8
Rhsim03G0134600 Rhododendron simsii HOM05D005473 ORTHO05D006543 2.8e-52 210.3 237 52.7
Duzib251G0055 Durio zibethinus HOM05D005473 ORTHO05D006543 6.0e-47 192.6 317 41.0
SMO202G0044 Selaginella moellendorffii HOM05D005473 ORTHO05D006543 1.7e-38 164.5 360 33.3
PSO384G2466 Papaver somniferum HOM05D005473 ORTHO05D006543 1.1e-37 161.8 341 37.2
Hund25017 Selenicereus undatus HOM05D005473 ORTHO05D006543 1.9e-37 161.0 126 65.1
AagrBONN_evm.TU.Sc2ySwM_344.5342 Anthoceros agrestis HOM05D005473 ORTHO05D006543 2.0e-34 151.0 402 30.6
C06p45250 Brassica napus HOM05D005473 ORTHO05D006543 8.4e-33 145.6 190 44.7
PSO339G4228 Papaver somniferum HOM05D005473 ORTHO05D006543 4.3e-29 133.3 416 28.4
C06p45240 Brassica napus HOM05D000048 ORTHO05D000207 2.8e-28 130.6 124 51.6
Pp3c15_5840 Physcomitrium patens HOM05D005473 ORTHO05D006543 3.7e-28 130.2 466 26.2
Oeu036129.1 Olea europaea HOM05D005473 ORTHO05D006543 3.1e-27 127.1 154 52.6
MSTRG.15906 Avicennia marina HOM05D005473 ORTHO05D006543 2.7e-15 87.4 55 74.5
CBR_g3993 Chara braunii HOM05D005493 ORTHO05D007154 3.5e-15 87.0 204 30.9
CAN.G572.16 Capsicum annuum HOM05D005473 ORTHO05D006543 1.3e-14 85.1 147 38.8
MD13G1032300 Malus domestica HOM05D005473 ORTHO05D006543 5.1e-14 83.2 56 69.6
MD16G1034500 Malus domestica HOM05D005473 ORTHO05D006543 1.1e-13 82.0 56 67.9
MCO05G366 Micromonas commoda HOM05D005473 ORTHO05D006543 2.7e-07 60.8 167 29.9


User provided reference genes

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