Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00616 Corylus avellana HOM05D006359 ORTHO05D007871 1.1e-77 293.1 139 100.0
Cfa015873 Carpinus fangiana HOM05D006359 ORTHO05D007871 2.8e-73 278.5 158 86.7
CiPaw.06G019000 Carya illinoinensis HOM05D006359 ORTHO05D007871 4.5e-63 244.6 158 74.1
Cpa.g.sc39.69 Carica papaya HOM05D006359 ORTHO05D007871 1.3e-62 243.0 157 74.5
Atru.chr12.1978 Acer truncatum HOM05D006359 ORTHO05D007871 5.0e-62 241.1 158 74.7
CANSAT56G0993 Cannabis sativa HOM05D006359 ORTHO05D007871 8.5e-62 240.4 154 73.4
Prupe.2G325400 Prunus persica HOM05D006359 ORTHO05D007871 8.5e-62 240.4 154 72.1
PGR042G0220 Punica granatum HOM05D006359 ORTHO05D007871 9.4e-61 236.9 154 72.1
Manes.08G162700 Manihot esculenta HOM05D006359 ORTHO05D007871 1.6e-60 236.1 158 72.2
TWI74G0194 Tripterygium wilfordii HOM05D006359 ORTHO05D007871 2.1e-60 235.7 156 69.9
CsaV3_5G005640 Cucumis sativus L. HOM05D006359 ORTHO05D007871 1.8e-59 232.6 158 70.9
MD01G1235400 Malus domestica HOM05D006359 ORTHO05D007871 2.3e-59 232.3 154 69.5
THA.LOC104827217 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 3.0e-59 231.9 157 70.7
Sed0025211 Sechium edule HOM05D006359 ORTHO05D007871 5.2e-59 231.1 158 70.3
THA.LOC104820881 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 5.2e-59 231.1 158 70.9
ATR0829G118 Amborella trichopoda HOM05D006359 ORTHO05D007871 6.8e-59 230.7 157 70.1
MELO3C005389.2 Cucumis melo HOM05D006359 ORTHO05D007871 6.8e-59 230.7 158 69.6
MD07G1308200 Malus domestica HOM05D006359 ORTHO05D007871 6.8e-59 230.7 154 68.8
RcHm_v2.0_Chr1g0384091 Rosa chinensis HOM05D006359 ORTHO05D007871 1.2e-58 229.9 154 69.5
FvH4_7g33890 Fragaria vesca HOM05D006359 ORTHO05D007871 2.0e-58 229.2 154 68.8
Sed0002409 Sechium edule HOM05D006359 ORTHO05D007871 2.0e-58 229.2 158 69.0
CSS0011317 Camellia sinensis var. sinensis HOM05D006359 ORTHO05D007871 2.6e-58 228.8 155 71.0
QL09p024508 Quercus lobata HOM05D006359 ORTHO05D007871 2.6e-58 228.8 156 69.9
Sabra19G0057200 Salix brachista HOM05D006359 ORTHO05D007871 2.6e-58 228.8 156 69.2
COL.COLO4_25307 Corchorus olitorius HOM05D006359 ORTHO05D007871 4.4e-58 228.0 157 71.3
Glyma.01G228400 Glycine max HOM05D006359 ORTHO05D007871 4.4e-58 228.0 152 71.7
TAR375G0743 Trochodendron aralioides HOM05D006359 ORTHO05D007871 4.4e-58 228.0 157 68.2
arahy.Tifrunner.gnm1.ann1.N39QDT Arachis hypogaea HOM05D006359 ORTHO05D007871 5.7e-58 227.6 154 70.8
Lsat_1_v5_gn_3_105561 Lactuca sativa HOM05D006359 ORTHO05D007871 5.7e-58 227.6 155 71.0
Glyma.11G011200 Glycine max HOM05D006359 ORTHO05D007871 7.5e-58 227.3 152 72.4
Thecc.09G264700 Theobroma cacao HOM05D006359 ORTHO05D007871 7.5e-58 227.3 158 70.3
Aa31LG5G13580 Aethionema arabicum HOM05D006359 ORTHO05D007871 9.8e-58 226.9 157 70.1
arahy.Tifrunner.gnm1.ann1.K5IGPH Arachis hypogaea HOM05D006359 ORTHO05D007871 9.8e-58 226.9 154 70.8
Phvul.002G039500 Phaseolus vulgaris HOM05D006359 ORTHO05D007871 1.7e-57 226.1 152 71.7
Potri.019G051400 Populus trichocarpa HOM05D006359 ORTHO05D007871 1.7e-57 226.1 156 69.9
FAN03G1870 Fragaria x ananassa HOM05D006359 ORTHO05D007871 3.7e-57 224.9 154 67.5
Actinidia18703 Actinidia chinensis HOM05D006359 ORTHO05D007871 4.9e-57 224.6 153 70.6
EL10Ac3g05084 Beta vulgaris HOM05D006359 ORTHO05D007871 4.9e-57 224.6 156 67.3
Sopen03g027690 Solanum pennellii HOM05D006359 ORTHO05D007871 4.9e-57 224.6 155 68.4
AUR62028171 Chenopodium quinoa HOM05D006359 ORTHO05D007871 8.3e-57 223.8 156 65.4
Ca_23151_v3 Cicer arietinum L. HOM05D006359 ORTHO05D007871 8.3e-57 223.8 154 70.1
PGSC0003DMG402000567 Solanum tuberosum HOM05D006359 ORTHO05D007871 8.3e-57 223.8 155 67.7
Dinv29162 Davidia involucrata HOM05D006359 ORTHO05D007871 1.1e-56 223.4 147 74.8
Medtr8g009960 Medicago truncatula HOM05D006359 ORTHO05D007871 1.4e-56 223.0 156 68.6
Carub.0003s0225 Capsella rubella HOM05D006359 ORTHO05D007871 1.8e-56 222.6 157 69.4
SGA_v2.0_scaffold18G08507 Striga asiatica HOM05D006359 ORTHO05D007871 1.8e-56 222.6 157 67.5
GSVIVG01024414001 Vitis vinifera HOM05D006359 ORTHO05D007871 1.8e-56 222.6 154 70.1
Duzib168G1989 Durio zibethinus HOM05D006359 ORTHO05D007871 5.4e-56 221.1 158 68.4
Lalb_Chr05g0211271 Lupinus albus HOM05D006359 ORTHO05D007871 5.4e-56 221.1 152 69.1
Migut.F00100 Erythranthe guttata HOM05D006359 ORTHO05D007871 7.0e-56 220.7 157 66.9
ECA246G3947 Erigeron canadensis HOM05D006359 ORTHO05D007871 9.1e-56 220.3 157 66.9
Thhalv10021682m.g Eutrema salsugineum HOM05D006359 ORTHO05D007871 9.1e-56 220.3 157 68.2
Cc02_g00330 Coffea canephora HOM05D006359 ORTHO05D007871 1.2e-55 219.9 156 67.3
Gohir.D09G101400 Gossypium hirsutum HOM05D006359 ORTHO05D007871 1.2e-55 219.9 158 67.7
Gorai.006G118800 Gossypium raimondii HOM05D006359 ORTHO05D007871 1.2e-55 219.9 158 67.7
TPR.G17376 Trifolium pratense HOM05D006359 ORTHO05D007871 1.2e-55 219.9 154 68.2
TPR.G779 Trifolium pratense HOM05D006359 ORTHO05D007871 1.2e-55 219.9 154 68.2
Eucgr.K00090 Eucalyptus grandis HOM05D006359 ORTHO05D007871 1.6e-55 219.5 155 66.5
Gohir.A09G104700 Gossypium hirsutum HOM05D006359 ORTHO05D007871 1.6e-55 219.5 158 67.7
AT3G03100 Arabidopsis thaliana HOM05D006359 ORTHO05D007871 2.7e-55 218.8 157 67.5
Ciclev10022653m.g Citrus clementina HOM05D006359 ORTHO05D007871 3.5e-55 218.4 151 68.2
BolC1t05848H Brassica oleracea HOM05D006359 ORTHO05D007871 5.9e-55 217.6 157 66.9
BraA01t04593Z Brassica rapa HOM05D006359 ORTHO05D007871 5.9e-55 217.6 157 66.9
Aqoxy3G02089 Aquilegia oxysepala HOM05D006359 ORTHO05D007871 1.0e-54 216.9 155 64.5
Sp3g02140 Schrenkiella parvula HOM05D006359 ORTHO05D007871 1.0e-54 216.9 157 66.9
AL3G12700 Arabidopsis lyrata HOM05D006359 ORTHO05D007871 1.3e-54 216.5 157 66.9
PSO063G2711 Papaver somniferum HOM05D006359 ORTHO05D007871 1.3e-54 216.5 154 64.3
unitig_0.g2431 Utricularia gibba HOM05D001194 ORTHO05D007871 1.3e-54 216.5 155 65.8
SalBow4G0660 Salvia bowleyana HOM05D006359 ORTHO05D007871 1.7e-54 216.1 155 65.2
SalBow4G2166 Salvia bowleyana HOM05D006359 ORTHO05D007871 1.7e-54 216.1 155 65.2
CAN.G303.77 Capsicum annuum HOM05D006359 ORTHO05D007871 2.9e-54 215.3 155 66.5
CARHR077120 Cardamine hirsuta HOM05D006359 ORTHO05D007871 5.0e-54 214.5 157 66.2
PSO782G4768 Papaver somniferum HOM05D006359 ORTHO05D007871 5.0e-54 214.5 154 63.6
HanXRQChr12g0381881 Helianthus annuus HOM05D006359 ORTHO05D007871 6.6e-54 214.2 155 65.8
SGA_v2.0_scaffold44G16885 Striga asiatica HOM05D006359 ORTHO05D007871 6.6e-54 214.2 157 65.0
Zm00001eb025210 Zea mays HOM05D006359 ORTHO05D007871 8.6e-54 213.8 155 66.5
C05p63700 Brassica napus HOM05D006359 ORTHO05D007871 1.1e-53 213.4 157 65.6
BolC5t35039H Brassica oleracea HOM05D006359 ORTHO05D007871 1.1e-53 213.4 157 65.6
BraSC90t46703Z Brassica rapa HOM05D006359 ORTHO05D007871 1.1e-53 213.4 157 65.6
FAN03G2552 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.5e-53 213.0 161 64.6
Os10g0579300 Oryza sativa ssp. japonica HOM05D006359 ORTHO05D007871 1.9e-53 212.6 155 67.1
arahy.Tifrunner.gnm1.ann1.0WZ6H1 Arachis hypogaea HOM05D006359 ORTHO05D007871 2.5e-53 212.2 166 63.9
A05p44080 Brassica napus HOM05D006359 ORTHO05D007871 2.5e-53 212.2 157 65.0
Duzib150G0394 Durio zibethinus HOM05D006359 ORTHO05D007871 7.2e-53 210.7 158 65.2
Lj3g0004693 Lotus japonicus HOM05D006359 ORTHO05D007871 9.5e-53 210.3 152 65.1
Rhsim09G0212500 Rhododendron simsii HOM05D006359 ORTHO05D007871 3.6e-52 208.4 158 67.7
FAN01G1102 Fragaria x ananassa HOM05D006359 ORTHO05D007871 4.0e-51 204.9 161 62.1
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 4.4e-50 201.4 146 64.4
Nitab4.5_0011930g0020 Nicotiana tabacum HOM05D006359 ORTHO05D007871 4.4e-50 201.4 155 63.9
AUR62002057 Chenopodium quinoa HOM05D006359 ORTHO05D007871 1.3e-49 199.9 156 60.3
Hund09785 Selenicereus undatus HOM05D006359 ORTHO05D007871 1.8e-48 196.1 152 61.8
Zm00001eb224990 Zea mays HOM05D006359 ORTHO05D007871 2.4e-48 195.7 154 63.0
Peaxi162Scf00745g00854 Petunia axillaris HOM05D006359 ORTHO05D007871 3.2e-48 195.3 155 62.6
TPR.G4015 Trifolium pratense HOM05D006359 ORTHO05D007871 1.0e-46 190.3 154 61.0
VMungo1215G3178 Vigna mungo HOM05D006359 ORTHO05D007871 1.7e-46 189.5 129 70.5
Sc13g0010840 Simmondsia chinensis HOM05D006359 ORTHO05D007871 3.0e-46 188.7 128 71.1
vmacro10188 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 3.9e-46 188.3 131 71.8
Nitab4.5_0000021g0410 Nicotiana tabacum HOM05D006359 ORTHO05D007871 5.6e-45 184.5 126 69.8
Gorai.009G080000 Gossypium raimondii HOM05D006359 ORTHO05D007871 5.8e-42 174.5 138 62.3
Lj3A888T26 Lonicera japonica HOM05D006359 ORTHO05D007871 8.3e-41 170.6 119 68.9
arahy.Tifrunner.gnm1.ann1.PN0BWC Arachis hypogaea HOM05D006359 ORTHO05D007871 1.4e-40 169.9 124 68.5
FAN02G0767 Fragaria x ananassa HOM05D006359 ORTHO05D007871 9.2e-40 167.2 128 64.1
CDE11G0363 Ceratophyllum demersum HOM05D006359 ORTHO05D007871 1.0e-38 163.7 118 64.4
Gohir.A05G075800 Gossypium hirsutum HOM05D006359 ORTHO05D007871 3.9e-38 161.8 137 57.7
Mapoly0001s0046 Marchantia polymorpha HOM05D006359 ORTHO05D007871 1.1e-37 160.2 157 52.2
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 1.4e-35 153.3 125 60.0
BNapus_Darmor_BZH_scaffold_129p00020 Brassica napus HOM05D006359 ORTHO05D007871 1.5e-34 149.8 135 57.8
ClCG01G005390 Citrullus lanatus HOM05D006359 ORTHO05D007871 3.4e-34 148.7 118 64.4
FAN05G5659 Fragaria x ananassa HOM05D006359 ORTHO05D007871 9.8e-34 147.1 84 79.8
AagrBONN_evm.TU.Sc2ySwM_344.5152 Anthoceros agrestis HOM05D006359 ORTHO05D007871 1.9e-32 142.9 148 47.3
Pp3c16_5910 Physcomitrium patens HOM05D006359 ORTHO05D007871 3.5e-31 138.7 156 46.2
BcaB04g21383 Brassica carinata HOM05D006359 ORTHO05D007871 1.3e-30 136.7 89 71.9
Psat4g215600 Pisum sativum HOM05D006359 ORTHO05D007871 5.1e-30 134.8 87 72.4
CBR_g23185 Chara braunii HOM05D000019 ORTHO05D000002 1.8e-27 126.3 144 42.4
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 6.8e-27 124.4 100 62.0
Nn1g01943 Nelumbo nucifera HOM05D006359 ORTHO05D007871 3.4e-26 122.1 84 65.5
Hma1.2p1_0758F.1_g213680 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 6.4e-25 117.9 93 65.6
FAN10G1928 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.1e-24 117.1 75 77.3
Actinidia33791 Actinidia chinensis HOM05D006359 ORTHO05D007871 6.0e-23 111.3 79 65.8
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 3.0e-22 109.0 91 60.4
SMO331G0004 Selaginella moellendorffii HOM05D006359 ORTHO05D007871 1.1e-21 107.1 104 51.0
Hma1.2p1_0758F.1_g213690 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 8.1e-20 100.9 82 64.6
vmacro23522 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 2.0e-18 96.3 51 84.3
Cre11.g467767 Chlamydomonas reinhardtii HOM05D006359 ORTHO05D007871 4.4e-10 68.6 157 29.3
MCO08G302 Micromonas commoda HOM05D006359 ORTHO05D007871 4.9e-09 65.1 111 36.9


User provided reference genes

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