Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00604 Corylus avellana HOM05D003675 ORTHO05D165237 7.9e-129 463.8 232 100.0
Haze_18108 Corylus avellana HOM05D001121 ORTHO05D001256 1.3e-14 84.3 170 40.0
CiPaw.10G086400 Carya illinoinensis HOM05D003675 ORTHO05D004318 1.4e-13 80.9 135 45.2
unitig_37.g12081 Utricularia gibba HOM05D003675 ORTHO05D004318 2.7e-12 76.6 141 39.0
Os01g0304100 Oryza sativa ssp. japonica HOM05D003675 ORTHO05D004318 2.0e-10 70.5 158 36.7
HPP92_010716 Vanilla planifolia HOM05D003675 ORTHO05D004318 8.2e-09 65.1 160 34.4
Cfa000847 Carpinus fangiana HOM05D003675 ORTHO05D004318 2.4e-08 63.5 214 32.7
Haze_05681 Corylus avellana HOM05D003675 ORTHO05D004318 1.2e-07 61.2 181 36.5
Dinv32189 Davidia involucrata HOM05D003675 ORTHO05D004318 1.2e-07 61.2 195 33.3
Aqoxy3G00253 Aquilegia oxysepala HOM05D003675 ORTHO05D004318 2.0e-07 60.5 214 32.2
CiPaw.09G116500 Carya illinoinensis HOM05D003675 ORTHO05D004318 2.0e-07 60.5 214 31.8
CAN.G1058.33 Capsicum annuum HOM05D003675 ORTHO05D004318 2.6e-07 60.1 219 29.2
Peaxi162Scf00155g01015 Petunia axillaris HOM05D003675 ORTHO05D004318 4.5e-07 59.3 215 30.2
GSVIVG01021607001 Vitis vinifera HOM05D003675 ORTHO05D004318 5.9e-07 58.9 222 30.6
CsaV3_1G037400 Cucumis sativus L. HOM05D003675 ORTHO05D004318 7.7e-07 58.5 214 31.3
CANSAT35G1002 Cannabis sativa HOM05D003675 ORTHO05D004318 1.0e-06 58.2 214 30.4
TWI53G0160 Tripterygium wilfordii HOM05D003675 ORTHO05D004318 1.0e-06 58.2 214 30.4
CDE07G0962 Ceratophyllum demersum HOM05D003675 ORTHO05D004318 1.3e-06 57.8 214 29.4
DCAR_003868 Daucus carota HOM05D003675 ORTHO05D004318 1.3e-06 57.8 214 30.4
Sed0018861 Sechium edule HOM05D003675 ORTHO05D004318 1.3e-06 57.8 214 30.4
Oeu015186.1 Olea europaea HOM05D003675 ORTHO05D004318 1.7e-06 57.4 214 30.8
ClCG03G006310 Citrullus lanatus HOM05D003675 ORTHO05D004318 2.2e-06 57.0 214 30.8
MELO3C002803.2 Cucumis melo HOM05D003675 ORTHO05D004318 2.2e-06 57.0 214 30.8
Sc24g0001490 Simmondsia chinensis HOM05D003675 ORTHO05D004318 2.2e-06 57.0 213 31.0
Sed0017115 Sechium edule HOM05D003675 ORTHO05D004318 3.8e-06 56.2 214 30.4
TAR627G0374 Trochodendron aralioides HOM05D003675 ORTHO05D004318 3.8e-06 56.2 214 29.4
Haze_06065 Corylus avellana HOM05D000100 ORTHO05D000052 5.0e-06 55.8 31 90.3
Eucgr.D00196 Eucalyptus grandis HOM05D003675 ORTHO05D004318 5.0e-06 55.8 214 30.4
Dinv15908 Davidia involucrata HOM05D003675 ORTHO05D004318 6.5e-06 55.5 222 29.7
Migut.H01338 Erythranthe guttata HOM05D003675 ORTHO05D004318 6.5e-06 55.5 214 30.4
HanXRQChr08g0209981 Helianthus annuus HOM05D003675 ORTHO05D004318 6.5e-06 55.5 215 29.3
Nn8g39842 Nelumbo nucifera HOM05D003675 ORTHO05D004318 6.5e-06 55.5 214 29.0
Os08g0323700 Oryza sativa ssp. japonica HOM05D003675 ORTHO05D004318 6.5e-06 55.5 222 29.3
Actinidia07469 Actinidia chinensis HOM05D003675 ORTHO05D004318 8.5e-06 55.1 214 29.4
DCAR_027870 Daucus carota HOM05D003675 ORTHO05D004318 8.5e-06 55.1 222 27.9
ECA233G3702 Erigeron canadensis HOM05D003675 ORTHO05D004318 8.5e-06 55.1 218 29.4
Manes.06G060500 Manihot esculenta HOM05D003675 ORTHO05D004318 8.5e-06 55.1 214 29.4
PGR083G0730 Punica granatum HOM05D003675 ORTHO05D004318 8.5e-06 55.1 214 29.4


User provided reference genes

Program Settings