Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00583 Corylus avellana HOM05D007456 ORTHO05D009411 2.6e-66 257.3 121 100.0
Cfa015911 Carpinus fangiana HOM05D007456 ORTHO05D009411 1.7e-57 228.0 121 90.9
CiPaw.06G020600 Carya illinoinensis HOM05D007456 ORTHO05D009411 2.0e-26 124.8 73 79.5
QL09p026466 Quercus lobata HOM05D007456 ORTHO05D009411 6.5e-25 119.8 107 60.7
QL09p026540 Quercus lobata HOM05D007456 ORTHO05D009411 6.5e-25 119.8 107 60.7
RcHm_v2.0_Chr1g0383591 Rosa chinensis HOM05D007456 ORTHO05D009411 3.9e-22 110.5 122 51.6
RcHm_v2.0_Chr1g0383651 Rosa chinensis HOM05D007456 ORTHO05D009411 6.9e-19 99.8 122 49.2
Prupe.2G323300 Prunus persica HOM05D007456 ORTHO05D009411 3.8e-17 94.0 118 49.2
Dinv11972 Davidia involucrata HOM05D007456 ORTHO05D009411 1.1e-16 92.4 125 43.2
Manes.08G164911 Manihot esculenta HOM05D007456 ORTHO05D009411 7.9e-15 86.3 119 42.9
FAN10G3274 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.4e-14 85.5 123 43.9
FvH4_7g33530 Fragaria vesca HOM05D007456 ORTHO05D009411 1.8e-14 85.1 121 43.8
FAN10G0306 Fragaria x ananassa HOM05D007456 ORTHO05D009411 3.0e-14 84.3 123 43.9
FAN01G1025 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.1e-13 82.4 121 43.0
MD01G1232900 Malus domestica HOM05D007456 ORTHO05D009411 2.0e-13 81.6 120 40.0
Glyma.11G013600 Glycine max HOM05D007456 ORTHO05D009411 2.5e-13 81.3 123 39.0
Ciclev10011504m.g Citrus clementina HOM05D007456 ORTHO05D009411 4.3e-13 80.5 116 42.2
FvH4_7g33490 Fragaria vesca HOM05D007456 ORTHO05D009411 1.3e-12 79.0 121 43.0
CANSAT54G1256 Cannabis sativa HOM05D007456 ORTHO05D028426 1.7e-12 78.6 120 40.0
FAN03G3193 Fragaria x ananassa HOM05D007456 ORTHO05D009411 1.7e-12 78.6 121 42.1
Actinidia08731 Actinidia chinensis HOM05D007456 ORTHO05D009411 2.8e-12 77.8 122 35.2
Lj9A258G53 Lonicera japonica HOM05D007456 ORTHO05D009411 2.8e-12 77.8 114 42.1
Lj1C1032G4 Lonicera japonica HOM05D007456 ORTHO05D009411 3.7e-12 77.4 114 39.5
TAR375G0715 Trochodendron aralioides HOM05D007456 ORTHO05D009411 4.8e-12 77.0 120 38.3
TAR375G0927 Trochodendron aralioides HOM05D007456 ORTHO05D009411 4.8e-12 77.0 120 38.3
Sed0026452 Sechium edule HOM05D007456 ORTHO05D009411 8.2e-12 76.3 121 38.0
Thecc.05G207800 Theobroma cacao HOM05D007456 ORTHO05D009411 2.4e-11 74.7 86 43.0
Glyma.01G230600 Glycine max HOM05D007456 ORTHO05D009411 4.1e-11 73.9 121 38.8
Gorai.012G086600 Gossypium raimondii HOM05D007456 ORTHO05D009411 4.1e-11 73.9 108 38.0
LjContig00222g0011827 Lotus japonicus HOM05D007456 ORTHO05D009411 5.3e-11 73.6 112 38.4
Gohir.A05G338400 Gossypium hirsutum HOM05D007456 ORTHO05D009411 6.9e-11 73.2 108 38.0
CsaV3_4G004450 Cucumis sativus L. HOM05D007456 ORTHO05D009411 1.5e-10 72.0 119 37.0
ClCG07G017250 Citrullus lanatus HOM05D007456 ORTHO05D009411 2.0e-10 71.6 119 37.8
Gohir.D04G076800 Gossypium hirsutum HOM05D007456 ORTHO05D009411 2.6e-10 71.2 68 48.5
Nn1g09307 Nelumbo nucifera HOM05D007456 ORTHO05D009411 3.4e-10 70.9 126 41.3
Hma1.2p1_0758F.1_g213530 Hydrangea macrophylla HOM05D007456 ORTHO05D009411 1.3e-09 68.9 57 56.1
Oeu055445.1 Olea europaea HOM05D007456 ORTHO05D009411 1.3e-09 68.9 46 65.2
Sopen10g030890 Solanum pennellii HOM05D007456 ORTHO05D009411 1.3e-09 68.9 106 35.8
PGSC0003DMG400023682 Solanum tuberosum HOM05D007456 ORTHO05D009411 2.9e-09 67.8 134 32.8
Nitab4.5_0004532g0030 Nicotiana tabacum HOM05D007456 ORTHO05D009411 8.5e-09 66.2 45 64.4
Nitab4.5_0016432g0010 Nicotiana tabacum HOM05D007456 ORTHO05D009411 8.5e-09 66.2 45 64.4
Peaxi162Scf00398g00211 Petunia axillaris HOM05D007456 ORTHO05D009411 8.5e-09 66.2 45 62.2
CAN.G128.20 Capsicum annuum HOM05D007456 ORTHO05D009411 2.5e-08 64.7 45 60.0
SalBow4G3145 Salvia bowleyana HOM05D007456 ORTHO05D009411 7.2e-08 63.2 121 35.5
Rhsim01G0125300 Rhododendron simsii HOM05D007456 ORTHO05D009411 2.7e-07 61.2 121 33.1
DCAR_010527 Daucus carota HOM05D006163 ORTHO05D007625 7.9e-07 59.7 104 33.7
GSVIVG01024456001 Vitis vinifera HOM05D007456 ORTHO05D009411 1.4e-06 58.9 45 64.4
Migut.F00108 Erythranthe guttata HOM05D007456 ORTHO05D009411 2.3e-06 58.2 53 49.1
Cpa.g.sc252.22 Carica papaya HOM05D007456 ORTHO05D009411 5.1e-06 57.0 112 35.7
Lsat_1_v5_gn_4_134121 Lactuca sativa HOM05D007456 ORTHO05D009411 6.7e-06 56.6 58 50.0


User provided reference genes

Program Settings