Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 1.1e-72 276.6 141 100.0
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 5.6e-69 264.2 141 96.5
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 6.9e-59 230.7 164 77.4
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 5.1e-46 188.0 172 63.4
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 3.7e-44 181.8 141 70.9
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 2.2e-41 172.6 164 60.4
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 6.5e-41 171.0 165 58.8
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 8.7e-38 160.6 164 56.1
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 1.5e-37 159.8 162 55.6
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 9.6e-37 157.1 162 53.7
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 3.7e-36 155.2 162 53.1
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 2.0e-34 149.4 126 64.3
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 2.0e-34 149.4 126 64.3
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 1.7e-33 146.4 138 58.0
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 2.2e-33 146.0 99 71.7
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 8.5e-33 144.1 187 47.1
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 8.5e-33 144.1 130 59.2
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 1.9e-32 142.9 121 61.2
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 1.9e-32 142.9 109 68.8
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.9e-32 142.9 130 58.5
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 1.9e-32 142.9 156 51.9
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 1.9e-32 142.9 156 51.9
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 2.5e-32 142.5 124 61.3
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 4.2e-32 141.7 165 50.9
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 4.2e-32 141.7 117 64.1
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 7.2e-32 141.0 124 60.5
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 9.3e-32 140.6 121 61.2
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 1.2e-31 140.2 142 54.9
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 2.1e-31 139.4 134 58.2
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 2.7e-31 139.0 123 59.3
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 2.7e-31 139.0 161 51.6
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 3.6e-31 138.7 155 53.5
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 3.6e-31 138.7 129 58.9
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 4.6e-31 138.3 132 58.3
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 4.6e-31 138.3 132 58.3
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 4.6e-31 138.3 116 60.3
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 6.1e-31 137.9 116 64.7
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 6.1e-31 137.9 142 52.8
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 1.0e-30 137.1 121 57.9
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 1.8e-30 136.3 129 56.6
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 2.3e-30 136.0 129 55.8
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 3.0e-30 135.6 124 58.1
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 3.9e-30 135.2 116 60.3
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 3.9e-30 135.2 134 54.5
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 3.9e-30 135.2 153 50.3
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 5.1e-30 134.8 125 59.2
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 6.7e-30 134.4 113 61.1
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 6.7e-30 134.4 131 56.5
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 6.7e-30 134.4 149 51.0
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 8.7e-30 134.0 146 52.1
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 1.1e-29 133.7 151 49.7
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 1.1e-29 133.7 151 49.7
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 1.1e-29 133.7 151 51.0
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 1.1e-29 133.7 168 48.2
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 1.5e-29 133.3 117 58.1
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 1.9e-29 132.9 117 59.0
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 1.9e-29 132.9 117 59.0
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 1.9e-29 132.9 130 54.6
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 3.3e-29 132.1 121 59.5
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 4.3e-29 131.7 140 52.9
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 5.7e-29 131.3 124 58.9
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 7.4e-29 131.0 128 53.1
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 1.3e-28 130.2 130 54.6
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 1.3e-28 130.2 130 54.6
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 2.2e-28 129.4 161 47.2
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 2.2e-28 129.4 118 57.6
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 2.8e-28 129.0 112 60.7
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 4.8e-28 128.3 128 53.9
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 6.3e-28 127.9 120 55.8
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 6.3e-28 127.9 131 54.2
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 1.4e-27 126.7 128 52.3
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 1.8e-27 126.3 116 58.6
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 2.4e-27 125.9 109 57.8
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 2.4e-27 125.9 172 44.8
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 6.9e-27 124.4 120 55.0
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 9.1e-27 124.0 124 54.0
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 1.5e-26 123.2 128 50.8
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 2.0e-26 122.9 120 54.2
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 2.0e-26 122.9 113 57.5
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 4.5e-26 121.7 121 54.5
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 4.5e-26 121.7 158 46.2
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 5.9e-26 121.3 116 56.0
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 5.9e-26 121.3 122 53.3
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 7.7e-26 120.9 128 51.6
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 1.3e-25 120.2 118 55.1
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 2.2e-25 119.4 75 80.0
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 3.8e-25 118.6 127 53.5
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 5.0e-25 118.2 140 47.9
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 8.5e-25 117.5 143 46.2
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 1.4e-24 116.7 110 57.3
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 5.5e-24 114.8 161 44.7
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 9.4e-24 114.0 131 49.6
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 1.4e-22 110.2 67 80.6
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 3.0e-22 109.0 132 45.5
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 3.9e-22 108.6 159 43.4
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 8.8e-22 107.5 79 72.2
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 4.4e-21 105.1 69 76.8
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 4.8e-20 101.7 72 68.1
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 1.1e-19 100.5 102 55.9
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 3.1e-19 99.0 95 54.7
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 5.9e-18 94.7 85 57.6
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.9e-17 92.4 79 63.3
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 8.5e-17 90.9 60 71.7
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 4.2e-16 88.6 46 93.5
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 7.2e-16 87.8 126 40.5
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 2.7e-15 85.9 120 40.0
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 2.3e-14 82.8 102 46.1
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 4.1e-11 72.0 74 55.4
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 3.2e-08 62.4 76 47.4


User provided reference genes

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