Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00523 Corylus avellana HOM05D005489 ORTHO05D006629 5.9e-97 357.5 170 100.0
Cfa015959 Carpinus fangiana HOM05D005489 ORTHO05D006629 2.4e-66 255.8 152 84.2
CiPaw.05G228700 Carya illinoinensis HOM05D005489 ORTHO05D006629 2.1e-38 162.9 76 96.1
Manes.18G073000 Manihot esculenta HOM05D005489 ORTHO05D006629 3.6e-38 162.2 76 96.1
QL12p035283 Quercus lobata HOM05D005489 ORTHO05D006629 3.6e-38 162.2 76 96.1
MELO3C022783.2 Cucumis melo HOM05D005489 ORTHO05D006629 4.7e-38 161.8 76 96.1
Ciclev10002818m.g Citrus clementina HOM05D005489 ORTHO05D006629 1.1e-37 160.6 76 94.7
TWI56G0906 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 1.1e-37 160.6 76 93.4
Atru.chr13.1318 Acer truncatum HOM05D005489 ORTHO05D006629 1.4e-37 160.2 76 92.1
Atru.chr13.1362 Acer truncatum HOM05D005489 ORTHO05D006629 1.4e-37 160.2 76 92.1
MBI06_g01046_MAGBIO Magnolia biondii HOM05D005489 ORTHO05D006629 1.4e-37 160.2 76 93.4
PGR044G1289 Punica granatum HOM05D005489 ORTHO05D006629 1.8e-37 159.8 76 92.1
Sc01g0001550 Simmondsia chinensis HOM05D005489 ORTHO05D006629 1.8e-37 159.8 76 92.1
Hma1.2p1_0221F.1_g093180 Hydrangea macrophylla HOM05D005489 ORTHO05D006629 2.3e-37 159.5 76 93.4
MD15G1359200 Malus domestica HOM05D005489 ORTHO05D006629 2.3e-37 159.5 76 93.4
Sed0015736 Sechium edule HOM05D005489 ORTHO05D006629 2.3e-37 159.5 76 93.4
Thecc.08G116800 Theobroma cacao HOM05D005489 ORTHO05D006629 2.3e-37 159.5 76 94.7
COL.COLO4_32811 Corchorus olitorius HOM05D005489 ORTHO05D006629 3.1e-37 159.1 76 94.7
PGSC0003DMG400027793 Solanum tuberosum HOM05D005489 ORTHO05D006629 3.1e-37 159.1 76 92.1
Aqoxy5G02479 Aquilegia oxysepala HOM05D005489 ORTHO05D006629 4.0e-37 158.7 76 93.4
Prupe.1G506000 Prunus persica HOM05D005489 ORTHO05D006629 4.0e-37 158.7 76 93.4
ClCG03G009110 Citrullus lanatus HOM05D005489 ORTHO05D006629 5.2e-37 158.3 74 95.9
CsaV3_5G023520 Cucumis sativus L. HOM05D005489 ORTHO05D006629 5.2e-37 158.3 74 95.9
Sopen11g008580 Solanum pennellii HOM05D005489 ORTHO05D006629 5.2e-37 158.3 76 90.8
Dinv26716 Davidia involucrata HOM05D005489 ORTHO05D006629 6.8e-37 157.9 76 93.4
Nn5g27958 Nelumbo nucifera HOM05D005489 ORTHO05D006629 6.8e-37 157.9 76 93.4
Gohir.A01G187700 Gossypium hirsutum HOM05D005489 ORTHO05D006629 8.9e-37 157.5 76 92.1
HanXRQChr11g0326271 Helianthus annuus HOM05D005489 ORTHO05D006629 8.9e-37 157.5 76 90.8
Lsat_1_v5_gn_4_135561 Lactuca sativa HOM05D005489 ORTHO05D006629 8.9e-37 157.5 76 92.1
Nitab4.5_0000051g0120 Nicotiana tabacum HOM05D005489 ORTHO05D006629 8.9e-37 157.5 76 92.1
Nitab4.5_0002332g0020 Nicotiana tabacum HOM05D005489 ORTHO05D006629 8.9e-37 157.5 76 92.1
Duzib041G0073 Durio zibethinus HOM05D005489 ORTHO05D006629 1.2e-36 157.1 76 93.4
Gohir.D02G082100 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.2e-36 157.1 76 92.1
Solyc11g013550.2 Solanum lycopersicum HOM05D005489 ORTHO05D006629 1.2e-36 157.1 76 89.5
TAR628G1556 Trochodendron aralioides HOM05D005489 ORTHO05D006629 1.2e-36 157.1 76 89.5
GSVIVG01008943001 Vitis vinifera HOM05D005489 ORTHO05D006629 1.2e-36 157.1 76 92.1
Dinv27383 Davidia involucrata HOM05D005489 ORTHO05D006629 1.5e-36 156.8 76 93.4
Gohir.A02G075000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.5e-36 156.8 76 90.8
HanXRQChr09g0260151 Helianthus annuus HOM05D005489 ORTHO05D006629 1.5e-36 156.8 76 90.8
THA.LOC104806808 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 1.5e-36 156.8 76 92.1
CANSAT25G2554 Cannabis sativa HOM05D005489 ORTHO05D006629 2.0e-36 156.4 74 91.9
PSO017G5790 Papaver somniferum HOM05D005489 ORTHO05D006629 2.0e-36 156.4 76 93.4
PSO170G3859 Papaver somniferum HOM05D005489 ORTHO05D006629 2.0e-36 156.4 76 93.4
TAR127G0005 Trochodendron aralioides HOM05D005489 ORTHO05D006629 3.4e-36 155.6 75 90.7
Aa31LG6G9070 Aethionema arabicum HOM05D005489 ORTHO05D006629 4.4e-36 155.2 76 89.5
Duzib093G1687 Durio zibethinus HOM05D005489 ORTHO05D006629 4.4e-36 155.2 76 92.1
FvH4_5g38950 Fragaria vesca HOM05D005489 ORTHO05D006629 4.4e-36 155.2 76 90.8
FAN04G1587 Fragaria x ananassa HOM05D005489 ORTHO05D006629 4.4e-36 155.2 76 90.8
FAN08G2064 Fragaria x ananassa HOM05D005489 ORTHO05D006629 4.4e-36 155.2 76 90.8
FAN13G3020 Fragaria x ananassa HOM05D005489 ORTHO05D006629 4.4e-36 155.2 76 90.8
FAN18G3455 Fragaria x ananassa HOM05D005489 ORTHO05D006629 4.4e-36 155.2 76 90.8
Gorai.002G220400 Gossypium raimondii HOM05D005489 ORTHO05D006629 4.4e-36 155.2 76 90.8
RcHm_v2.0_Chr7g0240921 Rosa chinensis HOM05D005489 ORTHO05D006629 4.4e-36 155.2 76 90.8
Sabra02G0070300 Salix brachista HOM05D005489 ORTHO05D006629 4.4e-36 155.2 76 92.1
Hund16821 Selenicereus undatus HOM05D005489 ORTHO05D006629 5.8e-36 154.8 76 90.8
TWI12G0464 Tripterygium wilfordii HOM05D005489 ORTHO05D006629 5.8e-36 154.8 76 89.5
Nn1g08538 Nelumbo nucifera HOM05D005489 ORTHO05D006629 7.5e-36 154.5 76 89.5
Potri.005G171901 Populus trichocarpa HOM05D005489 ORTHO05D006629 7.5e-36 154.5 76 90.8
CAN.G255.20 Capsicum annuum HOM05D005489 ORTHO05D006629 9.8e-36 154.1 76 86.8
THA.LOC104813132 Tarenaya hassleriana HOM05D005489 ORTHO05D006629 9.8e-36 154.1 76 89.5
TAR197G0004 Trochodendron aralioides HOM05D005489 ORTHO05D006629 9.8e-36 154.1 76 89.5
CDE06G1809 Ceratophyllum demersum HOM05D005489 ORTHO05D006629 1.3e-35 153.7 76 86.8
Potri.002G089300 Populus trichocarpa HOM05D005489 ORTHO05D006629 1.3e-35 153.7 76 90.8
Peaxi162Scf01011g00023 Petunia axillaris HOM05D005489 ORTHO05D006629 1.7e-35 153.3 76 90.8
Gohir.A06G041000 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.2e-35 152.9 76 88.2
Gohir.D06G041900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 2.2e-35 152.9 76 88.2
Gorai.010G047100 Gossypium raimondii HOM05D005489 ORTHO05D006629 2.2e-35 152.9 76 88.2
SGA_v2.0_scaffold118G32436 Striga asiatica HOM05D005489 ORTHO05D006629 2.2e-35 152.9 76 90.8
Glyma.06G108600 Glycine max HOM05D005489 ORTHO05D006629 2.9e-35 152.5 76 89.5
Rhsim06G0109100 Rhododendron simsii HOM05D005489 ORTHO05D006629 3.7e-35 152.1 76 89.5
AL1G51120 Arabidopsis lyrata HOM05D005489 ORTHO05D006629 4.9e-35 151.8 76 86.8
AT1G36980 Arabidopsis thaliana HOM05D005489 ORTHO05D006629 4.9e-35 151.8 76 86.8
SGA_v2.0_scaffold24G10504 Striga asiatica HOM05D005489 ORTHO05D006629 4.9e-35 151.8 76 89.5
Glyma.04G253700 Glycine max HOM05D005489 ORTHO05D006629 6.4e-35 151.4 76 88.2
arahy.Tifrunner.gnm1.ann1.204R5H Arachis hypogaea HOM05D005489 ORTHO05D006629 8.3e-35 151.0 76 88.2
arahy.Tifrunner.gnm1.ann1.64ZY3M Arachis hypogaea HOM05D005489 ORTHO05D006629 8.3e-35 151.0 76 88.2
Lj1g0000272 Lotus japonicus HOM05D005489 ORTHO05D006629 8.3e-35 151.0 76 88.2
SalBow1G3581 Salvia bowleyana HOM05D005489 ORTHO05D006629 8.3e-35 151.0 76 88.2
BcaB03g13640 Brassica carinata HOM05D005489 ORTHO05D006629 1.1e-34 150.6 76 85.5
BcaC05g27681 Brassica carinata HOM05D005489 ORTHO05D006629 1.1e-34 150.6 76 85.5
A05p23180 Brassica napus HOM05D005489 ORTHO05D006629 1.1e-34 150.6 76 85.5
C05p36630 Brassica napus HOM05D005489 ORTHO05D006629 1.1e-34 150.6 76 85.5
BraA05t21185Z Brassica rapa HOM05D005489 ORTHO05D006629 1.1e-34 150.6 76 85.5
CARHR034780 Cardamine hirsuta HOM05D005489 ORTHO05D006629 1.4e-34 150.2 76 84.2
DCAR_014792 Daucus carota HOM05D005489 ORTHO05D006629 1.4e-34 150.2 76 85.5
Thhalv10005115m.g Eutrema salsugineum HOM05D005489 ORTHO05D006629 1.4e-34 150.2 76 84.2
ECA232G0625 Erigeron canadensis HOM05D005489 ORTHO05D006629 1.9e-34 149.8 72 94.4
Migut.C01190 Erythranthe guttata HOM05D005489 ORTHO05D006629 1.9e-34 149.8 76 86.8
Carub.0001s3388 Capsella rubella HOM05D005489 ORTHO05D006629 2.4e-34 149.4 76 85.5
Ca_25761_v3 Cicer arietinum L. HOM05D005489 ORTHO05D006629 2.4e-34 149.4 76 86.8
Medtr3g073300 Medicago truncatula HOM05D005489 ORTHO05D006629 2.4e-34 149.4 76 86.8
Psat5g135600 Pisum sativum HOM05D005489 ORTHO05D006629 2.4e-34 149.4 76 86.8
TPR.G32948 Trifolium pratense HOM05D005489 ORTHO05D006629 2.4e-34 149.4 76 86.8
VMungo1127G1458 Vigna mungo HOM05D005489 ORTHO05D006629 2.4e-34 149.4 76 85.5
EL10Ac1g00039 Beta vulgaris HOM05D005489 ORTHO05D006629 3.2e-34 149.1 76 88.2
Sp1g31180 Schrenkiella parvula HOM05D005489 ORTHO05D006629 3.2e-34 149.1 76 84.2
Phvul.011G165300 Phaseolus vulgaris HOM05D005489 ORTHO05D006629 7.1e-34 147.9 76 84.2
BcaC05g27682 Brassica carinata HOM05D005489 ORTHO05D006629 1.2e-33 147.1 74 85.1
C05p36640 Brassica napus HOM05D005489 ORTHO05D006629 1.2e-33 147.1 74 85.1
DCAR_023128 Daucus carota HOM05D005489 ORTHO05D006629 1.2e-33 147.1 77 83.1
MSTRG.1486 Avicennia marina HOM05D005489 ORTHO05D006629 1.6e-33 146.7 76 85.5
Gohir.D01G181900 Gossypium hirsutum HOM05D005489 ORTHO05D006629 1.6e-33 146.7 76 88.2
ATR0121G008 Amborella trichopoda HOM05D005489 ORTHO05D006629 2.1e-33 146.4 74 87.8
Lalb_Chr08g0241711 Lupinus albus HOM05D005489 ORTHO05D006629 2.7e-33 146.0 76 84.2
Lalb_Chr11g0065701 Lupinus albus HOM05D005489 ORTHO05D006629 2.7e-33 146.0 76 84.2
Cc10_g10440 Coffea canephora HOM05D005489 ORTHO05D006629 4.6e-33 145.2 76 90.8
BolC5t32398H Brassica oleracea HOM05D005489 ORTHO05D006629 1.0e-32 144.1 82 79.3
Oeu032962.1 Olea europaea HOM05D005489 ORTHO05D006629 3.0e-32 142.5 76 85.5
Oeu043793.1 Olea europaea HOM05D005489 ORTHO05D006629 3.0e-32 142.5 78 83.3
Migut.N03320 Erythranthe guttata HOM05D005489 ORTHO05D006629 3.9e-32 142.1 76 85.5
Eucgr.F04378 Eucalyptus grandis HOM05D005489 ORTHO05D006629 1.9e-31 139.8 163 47.9
Nn2g15248 Nelumbo nucifera HOM05D005489 ORTHO05D006629 2.5e-31 139.4 90 73.3
unitig_747.g21477 Utricularia gibba HOM05D003597 ORTHO05D004420 4.3e-31 138.7 74 81.1
HPP92_002297 Vanilla planifolia HOM05D005489 ORTHO05D006629 2.8e-30 136.0 74 83.8
Actinidia29431 Actinidia chinensis HOM05D005489 ORTHO05D006629 8.9e-29 131.0 76 75.0
HPP92_005944 Vanilla planifolia HOM05D005489 ORTHO05D006629 2.0e-28 129.8 76 76.3
Oeu050268.1 Olea europaea HOM05D005489 ORTHO05D006629 7.6e-28 127.9 76 78.9
Os02g0566900 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 1.3e-27 127.1 82 69.5
SEGI_34511 Sequoiadendron giganteum HOM05D005489 ORTHO05D006629 2.9e-27 125.9 71 77.5
Zm00001eb244520 Zea mays HOM05D005489 ORTHO05D006629 3.8e-27 125.6 78 70.5
Zm00001eb100550 Zea mays HOM05D005489 ORTHO05D006629 1.4e-26 123.6 79 70.9
Os09g0453000 Oryza sativa ssp. japonica HOM05D005489 ORTHO05D006629 2.4e-26 122.9 79 73.4
AagrBONN_evm.TU.Sc2ySwM_344.2049 Anthoceros agrestis HOM05D005489 ORTHO05D006629 1.2e-25 120.6 71 73.2
SMO116G0262 Selaginella moellendorffii HOM05D005489 ORTHO05D006629 4.3e-23 112.1 75 65.3
Pp3c1_10200 Physcomitrium patens HOM05D005489 ORTHO05D006629 5.6e-23 111.7 73 64.4
Pp3c2_28270 Physcomitrium patens HOM05D005489 ORTHO05D006629 9.6e-23 110.9 73 65.8
Mapoly0004s0020 Marchantia polymorpha HOM05D005489 ORTHO05D006629 4.7e-22 108.6 90 56.7
CBR_g30829 Chara braunii HOM05D005489 ORTHO05D006629 8.1e-22 107.8 70 65.7
Sabra05G0129400 Salix brachista HOM05D005489 ORTHO05D006629 3.9e-16 89.0 76 60.5
Cre01.g042950 Chlamydomonas reinhardtii HOM05D005489 ORTHO05D006629 1.5e-12 77.0 66 45.5
Gorai.005G092000 Gossypium raimondii HOM05D005489 ORTHO05D006629 2.4e-10 69.7 32 93.8
SalBow7G1125 Salvia bowleyana HOM05D002998 ORTHO05D006629 7.1e-10 68.2 35 82.9
SalBow7G4082 Salvia bowleyana HOM05D005489 ORTHO05D006629 7.1e-10 68.2 35 82.9
TAR161G0001 Trochodendron aralioides HOM05D005489 ORTHO05D006629 7.9e-09 64.7 53 56.6
AUR62004694 Chenopodium quinoa HOM05D005489 ORTHO05D006629 2.3e-08 63.2 32 84.4


User provided reference genes

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