Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00484 Corylus avellana HOM05D008523 ORTHO05D010723 3.2e-82 308.5 176 100.0
QL05p051411 Quercus lobata HOM05D000038 ORTHO05D000423 6.8e-40 167.9 141 64.5
QL05p051451 Quercus lobata HOM05D000038 ORTHO05D000423 6.8e-40 167.9 141 64.5
MD08G1168300 Malus domestica HOM05D008523 ORTHO05D010723 1.4e-37 160.2 134 62.7
Dinv40375 Davidia involucrata HOM05D008523 ORTHO05D010723 1.2e-36 157.1 131 63.4
Thecc.08G120800 Theobroma cacao HOM05D008523 ORTHO05D010723 7.3e-34 147.9 135 57.8
Gorai.010G048500 Gossypium raimondii HOM05D000038 ORTHO05D000423 2.1e-33 146.4 135 60.7
GSVIVG01008905001 Vitis vinifera HOM05D008523 ORTHO05D010723 6.2e-33 144.8 127 60.6
COL.COLO4_07273 Corchorus olitorius HOM05D000038 ORTHO05D000423 2.4e-32 142.9 136 55.9
Gohir.D06G043400 Gossypium hirsutum HOM05D000038 ORTHO05D000423 1.5e-31 140.2 134 59.0
Gohir.A06G042401 Gossypium hirsutum HOM05D000038 ORTHO05D000423 1.3e-30 137.1 134 57.5
Atru.chr13.1404 Acer truncatum HOM05D008523 ORTHO05D010723 2.2e-30 136.3 124 58.9
Nn1g08698 Nelumbo nucifera HOM05D008523 ORTHO05D010723 6.4e-30 134.8 132 53.8
CANSAT25G1340 Cannabis sativa HOM05D008523 ORTHO05D010723 8.4e-30 134.4 116 62.1
TAR381G0860 Trochodendron aralioides HOM05D008523 ORTHO05D010723 4.6e-28 128.6 133 52.6
PGR042G3956 Punica granatum HOM05D008523 ORTHO05D010723 7.8e-28 127.9 125 52.8
Nitab4.5_0010364g0010 Nicotiana tabacum HOM05D000038 ORTHO05D000423 2.8e-25 119.4 97 60.8
PSO170G6317 Papaver somniferum HOM05D008523 ORTHO05D010723 1.8e-24 116.7 122 50.8
Sopen11g007810 Solanum pennellii HOM05D000038 ORTHO05D000423 1.8e-24 116.7 97 60.8
PGSC0003DMG401000914 Solanum tuberosum HOM05D008523 ORTHO05D010723 4.0e-24 115.5 98 61.2
Solyc11g013090.2 Solanum lycopersicum HOM05D008523 ORTHO05D010723 6.9e-24 114.8 97 60.8
Nitab4.5_0004554g0040 Nicotiana tabacum HOM05D000038 ORTHO05D000423 2.0e-23 113.2 97 58.8
Aqoxy6G00203 Aquilegia oxysepala HOM05D008523 ORTHO05D010723 4.4e-23 112.1 97 54.6
Peaxi162Scf00451g00722 Petunia axillaris HOM05D000038 ORTHO05D000423 6.4e-22 108.2 111 51.4
Migut.C01156 Erythranthe guttata HOM05D008523 ORTHO05D010723 5.4e-21 105.1 95 50.5
HPP92_005840 Vanilla planifolia HOM05D008523 ORTHO05D010723 4.3e-18 95.5 129 44.2
HPP92_005846 Vanilla planifolia HOM05D008523 ORTHO05D010723 4.3e-18 95.5 129 44.2
MBI03_g05982_MAGBIO Magnolia biondii HOM05D008523 ORTHO05D010723 5.6e-18 95.1 93 55.9
Rhsim07G0163700 Rhododendron simsii HOM05D008523 ORTHO05D010723 4.8e-17 92.0 62 69.4
SEGI_03454 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 5.1e-11 72.0 53 66.0
SEGI_37575 Sequoiadendron giganteum HOM05D008523 ORTHO05D010723 5.1e-11 72.0 52 67.3
HPP92_009511 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.5e-10 69.7 72 52.8
HPP92_027951 Vanilla planifolia HOM05D008523 ORTHO05D010723 2.5e-10 69.7 72 52.8
Mapoly0082s0057 Marchantia polymorpha HOM05D008523 ORTHO05D010723 3.3e-10 69.3 55 58.2
SMO347G0131 Selaginella moellendorffii HOM05D008523 ORTHO05D010723 5.6e-10 68.6 53 62.3
AagrBONN_evm.TU.Sc2ySwM_362.1100 Anthoceros agrestis HOM05D008523 ORTHO05D010723 9.6e-10 67.8 56 58.9
CBR_g66722 Chara braunii HOM05D008523 ORTHO05D010723 3.7e-09 65.9 60 50.0
Pp3c11_25910 Physcomitrium patens HOM05D008523 ORTHO05D010723 8.1e-09 64.7 55 54.5
SalBow7G3869 Salvia bowleyana HOM05D008523 ORTHO05D010723 8.1e-09 64.7 144 38.2
SalBow7G0429 Salvia bowleyana HOM05D008523 ORTHO05D010723 5.3e-08 62.0 144 37.5
MCO15G259 Micromonas commoda HOM05D008523 ORTHO05D010723 9.0e-08 61.2 62 51.6
PRCOL_00001244 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 2.0e-07 60.1 45 60.0
PRCOL_00000745 Prasinoderma coloniale HOM05D008523 ORTHO05D010723 8.4e-06 54.7 50 52.0


User provided reference genes

Program Settings