Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00460 Corylus avellana HOM05D005355 ORTHO05D006591 1.1e-177 626.7 347 100.0
Cfa016002 Carpinus fangiana HOM05D005355 ORTHO05D006591 4.3e-147 525.0 349 87.4
CiPaw.06G029200 Carya illinoinensis HOM05D005355 ORTHO05D006591 4.0e-116 422.2 341 72.4
CiPaw.05G223300 Carya illinoinensis HOM05D005355 ORTHO05D006591 9.4e-110 401.0 341 71.0
QL09p035410 Quercus lobata HOM05D005355 ORTHO05D006591 4.9e-98 362.1 350 66.6
MD15G1351600 Malus domestica HOM05D005355 ORTHO05D006591 8.3e-98 361.3 393 57.8
GSVIVG01008886001 Vitis vinifera HOM05D005355 ORTHO05D006591 5.4e-97 358.6 351 63.8
Manes.18G076200 Manihot esculenta HOM05D005355 ORTHO05D006591 6.4e-90 335.1 350 62.3
Potri.002G085000 Populus trichocarpa HOM05D005355 ORTHO05D006591 2.4e-89 333.2 352 61.6
CSS0023513 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.2e-88 330.9 352 59.4
Prupe.1G500200 Prunus persica HOM05D005355 ORTHO05D006591 2.7e-88 329.7 350 61.1
Phvul.009G124200 Phaseolus vulgaris HOM05D005355 ORTHO05D006591 2.8e-85 319.7 348 56.3
Ciclev10000938m.g Citrus clementina HOM05D005355 ORTHO05D006591 1.1e-84 317.8 299 65.2
Sabra05G0133000 Salix brachista HOM05D005355 ORTHO05D006591 5.2e-84 315.5 343 60.1
Thecc.08G123400 Theobroma cacao HOM05D005355 ORTHO05D006591 1.2e-83 314.3 367 58.9
CSS0006134 Camellia sinensis var. sinensis HOM05D005355 ORTHO05D006591 1.5e-83 313.9 352 57.4
VMungo1309G2754 Vigna mungo HOM05D005355 ORTHO05D006591 2.6e-83 313.2 348 55.7
Duzib093G2154 Durio zibethinus HOM05D005355 ORTHO05D006591 4.4e-83 312.4 351 61.3
Glyma.04G250500 Glycine max HOM05D005355 ORTHO05D006591 4.4e-83 312.4 348 57.5
MD00G1157400 Malus domestica HOM05D005355 ORTHO05D006591 1.7e-82 310.5 393 54.2
Sabra02G0066400 Salix brachista HOM05D005355 ORTHO05D006591 4.9e-82 308.9 375 57.1
Glyma.06G112300 Glycine max HOM05D005355 ORTHO05D006591 3.0e-79 299.7 348 55.7
TWI12G0790 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 6.6e-79 298.5 350 56.0
Dinv27329 Davidia involucrata HOM05D005355 ORTHO05D006591 8.6e-79 298.1 350 55.4
Medtr3g072480 Medicago truncatula HOM05D005355 ORTHO05D006591 3.3e-78 296.2 350 56.6
CANSAT25G1794 Cannabis sativa HOM05D005355 ORTHO05D006591 1.6e-77 293.9 358 54.2
TWI56G0611 Tripterygium wilfordii HOM05D005355 ORTHO05D006591 2.0e-75 287.0 332 57.8
PGR044G2411 Punica granatum HOM05D005355 ORTHO05D006591 4.4e-75 285.8 354 55.4
Ca_15194_v3 Cicer arietinum L. HOM05D005355 ORTHO05D006591 2.9e-74 283.1 349 54.4
FAN27G0453 Fragaria x ananassa HOM05D005355 ORTHO05D006591 8.3e-74 281.6 350 53.4
TAR625G0673 Trochodendron aralioides HOM05D005355 ORTHO05D006591 8.3e-74 281.6 344 54.9
Duzib116G0422 Durio zibethinus HOM05D005355 ORTHO05D006591 3.2e-73 279.6 363 54.5
Eucgr.F04357 Eucalyptus grandis HOM05D005355 ORTHO05D006591 4.1e-73 279.3 351 55.8
Lj1g0013612 Lotus japonicus HOM05D005355 ORTHO05D006591 9.2e-73 278.1 350 54.3
Nn5g28219 Nelumbo nucifera HOM05D005355 ORTHO05D006591 2.1e-72 276.9 355 53.2
Cpa.g.sc36.50 Carica papaya HOM05D005355 ORTHO05D006591 1.3e-71 274.2 290 59.3
Gorai.010G049600 Gossypium raimondii HOM05D005355 ORTHO05D006591 1.3e-71 274.2 362 54.7
RcHm_v2.0_Chr6g0295601 Rosa chinensis HOM05D005355 ORTHO05D006591 1.3e-71 274.2 276 63.0
Potri.005G176400 Populus trichocarpa HOM05D005355 ORTHO05D006591 1.7e-71 273.9 346 55.8
ClCG08G005570 Citrullus lanatus HOM05D005355 ORTHO05D006591 9.6e-70 268.1 351 52.7
Gohir.A06G043600 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.6e-69 267.3 364 53.8
PSO170G1761 Papaver somniferum HOM05D005355 ORTHO05D006591 3.1e-68 263.1 352 49.1
arahy.Tifrunner.gnm1.ann1.SCI4MN Arachis hypogaea HOM05D005355 ORTHO05D006591 4.0e-68 262.7 353 51.6
MBI06_g20714_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 4.0e-68 262.7 364 48.9
CsaV3_2G014020 Cucumis sativus L. HOM05D005355 ORTHO05D006591 6.8e-68 261.9 356 53.1
Gohir.D06G044400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.5e-67 260.8 362 53.6
arahy.Tifrunner.gnm1.ann1.Y2U2DK Arachis hypogaea HOM05D005355 ORTHO05D006591 3.4e-67 259.6 350 52.0
PSO528G0270 Papaver somniferum HOM05D005355 ORTHO05D006591 4.4e-67 259.2 352 49.1
Hund27026 Selenicereus undatus HOM05D005355 ORTHO05D006591 5.8e-67 258.8 374 47.6
Gohir.A05G234400 Gossypium hirsutum HOM05D005355 ORTHO05D006591 1.3e-66 257.7 365 53.2
Atru.chr13.1433 Acer truncatum HOM05D005355 ORTHO05D006591 1.7e-66 257.3 244 66.4
FAN20G1264 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.7e-66 257.3 353 49.0
FAN24G2565 Fragaria x ananassa HOM05D005355 ORTHO05D006591 1.7e-66 257.3 353 49.3
Psat5g132440 Pisum sativum HOM05D005355 ORTHO05D006591 2.2e-66 256.9 345 52.2
RhsimUnG0093800 Rhododendron simsii HOM05D005355 ORTHO05D006591 6.4e-66 255.4 331 52.0
MELO3C010600.2 Cucumis melo HOM05D005355 ORTHO05D006591 4.2e-65 252.7 356 52.2
Gohir.D05G236700 Gossypium hirsutum HOM05D005355 ORTHO05D006591 2.7e-64 250.0 361 52.1
TPR.G24014 Trifolium pratense HOM05D005355 ORTHO05D006591 3.5e-64 249.6 345 51.3
THA.LOC104817273 Tarenaya hassleriana HOM05D005355 ORTHO05D006591 1.0e-63 248.1 347 49.9
Gorai.009G245100 Gossypium raimondii HOM05D005355 ORTHO05D006591 1.7e-63 247.3 362 51.9
FAN15G2971 Fragaria x ananassa HOM05D005355 ORTHO05D006591 5.1e-63 245.7 351 50.4
vmacro00824 Vaccinium macrocarpon HOM05D005355 ORTHO05D006591 1.5e-62 244.2 368 51.4
EL10Ac1g01045 Beta vulgaris HOM05D005355 ORTHO05D006591 1.9e-62 243.8 350 50.3
Thhalv10029139m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.3e-61 241.1 347 47.6
Sc01g0001210 Simmondsia chinensis HOM05D005355 ORTHO05D006591 3.6e-61 239.6 332 48.5
Lj4A622G14 Lonicera japonica HOM05D005355 ORTHO05D006591 4.8e-61 239.2 331 51.7
DCAR_011614 Daucus carota HOM05D005355 ORTHO05D006591 6.9e-60 235.3 299 53.5
Lalb_Chr08g0241491 Lupinus albus HOM05D005355 ORTHO05D006591 2.0e-59 233.8 348 50.0
FvH4_2g26711 Fragaria vesca HOM05D005355 ORTHO05D006591 4.9e-58 229.2 332 47.6
Sed0010827 Sechium edule HOM05D005355 ORTHO05D006591 4.9e-58 229.2 307 54.7
Cc00_g04310 Coffea canephora HOM05D005355 ORTHO05D006591 1.1e-57 228.0 344 44.8
AL1G52440 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 7.1e-57 225.3 343 47.2
Thhalv10011453m.g Eutrema salsugineum HOM05D005355 ORTHO05D006591 1.6e-56 224.2 342 48.2
Aqoxy6G00187 Aquilegia oxysepala HOM05D005355 ORTHO05D006591 2.7e-56 223.4 348 45.4
MSTRG.326 Avicennia marina HOM05D005355 ORTHO05D006591 1.3e-55 221.1 306 50.7
CAN.G127.21 Capsicum annuum HOM05D005355 ORTHO05D006591 1.3e-55 221.1 356 45.2
Nitab4.5_0001803g0130 Nicotiana tabacum HOM05D005355 ORTHO05D006591 3.9e-55 219.5 355 43.9
Sp1g33640 Schrenkiella parvula HOM05D005355 ORTHO05D006591 8.7e-55 218.4 345 50.1
MBI15_g20159_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.9e-54 217.2 290 50.7
Oeu062052.1 Olea europaea HOM05D005355 ORTHO05D006591 4.3e-54 216.1 355 46.2
MBI15_g24178_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 1.6e-53 214.2 296 52.7
Aa31LG9G14260 Aethionema arabicum HOM05D005355 ORTHO05D006591 3.1e-52 209.9 359 45.4
Carub.0006s2687 Capsella rubella HOM05D005355 ORTHO05D006591 1.2e-51 208.0 351 45.6
AT4G08310 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 5.8e-51 205.7 348 45.7
AT1G44780 Arabidopsis thaliana HOM05D005355 ORTHO05D006591 1.3e-50 204.5 345 44.9
CDE06G1640 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 6.4e-50 202.2 355 42.8
ECA238G0419 Erigeron canadensis HOM05D005355 ORTHO05D006591 4.2e-49 199.5 337 42.4
AL6G42080 Arabidopsis lyrata HOM05D005355 ORTHO05D006591 7.1e-49 198.7 300 48.0
C06p00770 Brassica napus HOM05D005355 ORTHO05D006591 7.1e-49 198.7 316 45.6
AUR62019052 Chenopodium quinoa HOM05D005355 ORTHO05D006591 7.1e-49 198.7 330 45.2
SHI29459 Sapria himalayana HOM05D005355 ORTHO05D006591 1.6e-48 197.6 351 41.3
Sp6g09690 Schrenkiella parvula HOM05D005355 ORTHO05D006591 2.1e-48 197.2 349 44.1
BcaB07g33934 Brassica carinata HOM05D005355 ORTHO05D006591 7.9e-48 195.3 341 44.9
SGA_v2.0_scaffold122G33176 Striga asiatica HOM05D005355 ORTHO05D006591 1.3e-47 194.5 304 45.4
A10p07350 Brassica napus HOM05D005355 ORTHO05D006591 1.8e-47 194.1 344 46.5
CARHR259390 Cardamine hirsuta HOM05D005355 ORTHO05D006591 3.0e-47 193.4 351 43.3
BraSC36t46079Z Brassica rapa HOM05D005355 ORTHO05D006591 6.7e-47 192.2 344 46.2
Sopen11g007660 Solanum pennellii HOM05D005355 ORTHO05D006591 1.1e-46 191.4 329 41.9
Lsat_1_v5_gn_5_101461 Lactuca sativa HOM05D005355 ORTHO05D006591 1.5e-46 191.0 338 43.8
BcaC08g42867 Brassica carinata HOM05D005355 ORTHO05D006591 1.9e-46 190.7 314 45.2
BolC6t35219H Brassica oleracea HOM05D005355 ORTHO05D006591 1.9e-46 190.7 314 45.2
Solyc11g012920.3 Solanum lycopersicum HOM05D005355 ORTHO05D006591 4.8e-45 186.0 329 41.3
Os11g0544600 Oryza sativa ssp. japonica HOM05D005355 ORTHO05D006591 8.1e-45 185.3 350 41.1
HanXRQChr04g0109451 Helianthus annuus HOM05D005355 ORTHO05D006591 5.3e-44 182.6 269 46.5
Zm00001eb113700 Zea mays HOM05D005355 ORTHO05D006591 3.4e-43 179.9 341 41.6
ATR0104G007 Amborella trichopoda HOM05D005355 ORTHO05D006591 1.0e-42 178.3 355 40.6
Migut.F01876 Erythranthe guttata HOM05D005355 ORTHO05D006591 1.0e-42 178.3 307 44.0
unitig_52.g17510 Utricularia gibba HOM05D005355 ORTHO05D006467 1.3e-42 177.9 381 37.3
MBI15_g20157_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D010248 4.8e-37 159.5 270 44.4
COL.COLO4_35946 Corchorus olitorius HOM05D005355 ORTHO05D006591 1.4e-36 157.9 283 41.7
CARHR036040 Cardamine hirsuta HOM05D005355 ORTHO05D006591 1.7e-34 151.0 262 43.1
AUR62027892 Chenopodium quinoa HOM05D005355 ORTHO05D006591 5.5e-33 146.0 328 37.2
CDE06G0823 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 4.1e-28 129.8 115 65.2
MBI15_g19197_MAGBIO Magnolia biondii HOM05D005355 ORTHO05D006591 9.0e-28 128.6 93 69.9
AagrBONN_evm.TU.Sc2ySwM_362.1810 Anthoceros agrestis HOM05D005355 ORTHO05D006591 5.9e-27 125.9 341 34.6
SMO230G0121 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 1.0e-26 125.2 319 33.2
arahy.Tifrunner.gnm1.ann1.V8LFJN Arachis hypogaea HOM05D005355 ORTHO05D006591 4.3e-22 109.8 251 39.4
SMO230G0058 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 2.6e-19 100.5 103 56.3
SMO367G1068 Selaginella moellendorffii HOM05D005355 ORTHO05D006591 4.5e-19 99.8 300 32.0
Mapoly0004s0202 Marchantia polymorpha HOM05D005355 ORTHO05D006591 5.0e-18 96.3 334 29.6
Carub.0001s3530 Capsella rubella HOM05D005355 ORTHO05D006591 1.9e-17 94.4 136 46.3
Atru.chr13.1434 Acer truncatum HOM05D005355 ORTHO05D006591 4.2e-17 93.2 105 54.3
SGA_v2.0_scaffold340G49302 Striga asiatica HOM05D005355 ORTHO05D006591 6.1e-16 89.4 131 44.3
Pp3c21_16190 Physcomitrium patens HOM05D005355 ORTHO05D006591 7.9e-16 89.0 289 30.4
Nitab4.5_0001273g0020 Nicotiana tabacum HOM05D005355 ORTHO05D006591 3.0e-15 87.0 337 29.4
CBR_g29492 Chara braunii HOM05D005355 ORTHO05D006591 2.0e-14 84.3 80 48.8
Peaxi162Scf00914g00033 Petunia axillaris HOM05D005355 ORTHO05D006591 7.4e-14 82.4 260 34.2
CDE06G1231 Ceratophyllum demersum HOM05D005355 ORTHO05D006591 9.7e-14 82.0 217 35.5
SEGI_25872 Sequoiadendron giganteum HOM05D005355 ORTHO05D006591 5.5e-09 66.2 367 26.4
HPP92_011157 Vanilla planifolia HOM05D005355 ORTHO05D006591 6.1e-08 62.8 181 36.5
Cpa.g.sc36.52 Carica papaya HOM05D005355 ORTHO05D006591 3.3e-06 57.0 110 39.1
SGA_v2.0_scaffold340G49301 Striga asiatica HOM05D005355 ORTHO05D006591 5.7e-06 56.2 63 54.0


User provided reference genes

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