Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 1.4e-198 696.0 348 100.0
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 3.6e-141 505.4 348 76.4
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 1.4e-121 440.3 346 66.2
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 2.6e-115 419.5 348 63.8
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 8.6e-111 404.4 351 61.8
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 8.6e-111 404.4 341 64.2
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.5e-110 403.7 349 61.9
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 1.5e-110 403.7 349 61.9
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 3.3e-110 402.5 346 61.8
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 7.3e-110 401.4 340 63.5
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 9.5e-110 401.0 349 62.5
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.6e-109 400.2 349 61.9
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 2.1e-109 399.8 350 61.7
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 8.0e-109 397.9 349 62.2
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 3.0e-108 396.0 352 61.6
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 8.9e-108 394.4 349 59.9
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 1.2e-107 394.0 351 61.8
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 1.5e-107 393.7 352 61.9
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 2.0e-107 393.3 350 62.0
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 7.5e-107 391.3 340 62.4
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 2.2e-106 389.8 345 61.4
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 2.2e-106 389.8 345 61.4
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 2.9e-106 389.4 327 63.9
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 3.7e-106 389.0 345 61.4
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.4e-105 387.1 345 61.2
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.8e-105 386.7 352 61.1
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 7.0e-105 384.8 350 60.9
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.2e-104 384.0 337 60.8
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 3.9e-103 379.0 348 59.5
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 6.6e-103 378.3 331 61.0
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 9.5e-102 374.4 347 58.8
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 1.6e-101 373.6 334 58.7
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.8e-101 372.9 350 57.4
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 1.4e-100 370.5 345 57.4
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 2.3e-100 369.8 341 58.7
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 6.8e-100 368.2 341 57.5
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 8.9e-100 367.9 334 59.0
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.5e-99 367.1 344 55.5
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 2.0e-99 366.7 342 58.2
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 2.0e-99 366.7 349 57.9
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 2.0e-99 366.7 325 61.2
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 2.6e-99 366.3 341 58.1
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 2.6e-99 366.3 341 58.1
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 4.4e-99 365.5 341 57.8
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 4.4e-99 365.5 344 55.5
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 5.8e-99 365.2 343 58.6
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 2.2e-98 363.2 344 57.3
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 2.9e-98 362.8 345 57.4
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 4.9e-98 362.1 345 56.5
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 6.4e-98 361.7 344 55.2
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.4e-97 360.5 356 55.6
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 1.9e-97 360.1 345 57.1
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 2.4e-97 359.8 345 56.5
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 3.2e-97 359.4 345 57.7
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 5.4e-97 358.6 333 59.2
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 6.0e-96 355.1 342 57.3
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 6.0e-96 355.1 342 57.3
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 1.0e-95 354.4 342 57.3
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 1.9e-94 350.1 333 59.2
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 5.6e-94 348.6 339 56.0
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 9.5e-94 347.8 347 54.8
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 9.5e-94 347.8 344 55.8
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 1.6e-93 347.1 337 57.3
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 2.1e-93 346.7 340 57.1
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 6.2e-93 345.1 344 55.2
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 1.8e-92 343.6 339 55.5
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 3.1e-92 342.8 343 55.4
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 5.2e-92 342.0 339 56.3
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 6.8e-92 341.7 342 53.2
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 6.8e-92 341.7 344 55.8
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 8.9e-92 341.3 341 56.0
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 8.9e-92 341.3 328 56.7
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 4.4e-91 339.0 335 57.0
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 4.4e-91 339.0 326 57.1
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 9.8e-91 337.8 335 57.0
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 2.2e-90 336.7 328 56.7
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.7e-90 335.9 347 56.5
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 3.7e-90 335.9 347 56.5
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 2.4e-89 333.2 342 55.0
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 2.7e-88 329.7 325 57.8
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 1.3e-87 327.4 355 55.2
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 1.3e-87 327.4 355 54.1
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 5.1e-87 325.5 332 54.5
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 5.1e-87 325.5 336 51.5
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 2.5e-86 323.2 347 54.8
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 3.6e-85 319.3 347 54.5
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 3.1e-84 316.2 345 53.0
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 6.4e-82 308.5 343 51.0
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 8.9e-76 288.1 171 82.5
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.7e-74 283.9 178 79.2
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 2.4e-73 280.0 195 71.8
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 5.4e-73 278.9 338 48.8
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 2.1e-69 266.9 180 71.7
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 2.7e-64 250.0 245 55.9
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.2e-59 234.6 239 54.4
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 2.4e-57 226.9 135 78.5
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 6.0e-56 222.2 256 50.4
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 1.3e-55 221.1 343 42.3
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 2.4e-52 210.3 346 36.7
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 2.0e-51 207.2 338 39.9
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 1.1e-49 201.4 244 48.4
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 1.6e-48 197.6 349 37.5
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 2.3e-47 193.7 232 48.3
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.3e-45 188.0 189 52.9
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 2.9e-42 176.8 341 36.1
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.9e-38 164.1 285 37.2
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 5.5e-33 146.0 343 34.1
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 5.3e-28 129.4 92 66.3
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.6e-27 127.1 78 76.9
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 2.9e-26 123.6 197 40.6
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 6.1e-24 115.9 76 71.1
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 1.4e-23 114.8 346 29.5
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 3.3e-22 110.2 150 42.7
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 5.3e-20 102.8 78 66.7
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 2.7e-16 90.5 65 64.6
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.8e-15 87.8 115 45.2
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 1.7e-13 81.3 68 63.2
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 8.5e-10 68.9 72 51.4
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.4e-07 61.6 111 35.1


User provided reference genes

Program Settings